RNA–Protein interactions for RNA: ENST00000395793.7

CXCL12-204, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 5 BASIC

Gene CXCL12, Length 665 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-204ENST00000395793 ATP5G3P48201 142 aa12.63□□□□□ -0.39
CXCL12-204ENST00000395793 TMEM252Q8N6L7 170 aa12.63□□□□□ -0.39
CXCL12-204ENST00000395793 TMEM263Q8WUH6 116 aaKnown RBP12.63□□□□□ -0.39
CXCL12-204ENST00000395793 NOP10Q9NPE3 64 aaKnown RBP12.63□□□□□ -0.39
CXCL12-204ENST00000395793 LYRM2Q9NU23 88 aaPredicted RBP12.63□□□□□ -0.39
CXCL12-204ENST00000395793 ZNF586Q9NXT0 402 aa12.63□□□□□ -0.39
CXCL12-204ENST00000395793 NDUFA13Q9P0J0 144 aa12.63□□□□□ -0.39
CXCL12-204ENST00000395793 PXMP4Q9Y6I8 212 aa12.63□□□□□ -0.39
CXCL12-204ENST00000395793 CBY3A6NI87 242 aa12.62□□□□□ -0.39
CXCL12-204ENST00000395793 CT45A10P0DMU9 189 aa12.62□□□□□ -0.39
CXCL12-204ENST00000395793 SULT1A1P50225 295 aa12.62□□□□□ -0.39
CXCL12-204ENST00000395793 SLC39A9Q9NUM3 307 aa12.62□□□□□ -0.39
CXCL12-204ENST00000395793 TIMM8BQ9Y5J9 83 aaPredicted RBP12.62□□□□□ -0.39
CXCL12-204ENST00000395793 NPIPB6E9PJ23 425 aa12.61□□□□□ -0.39
CXCL12-204ENST00000395793 H7BYZ3 331 aa12.61□□□□□ -0.39
CXCL12-204ENST00000395793 RPL29P47914 159 aaKnown RBP12.61□□□□□ -0.39
CXCL12-204ENST00000395793 BAXQ07812 192 aa12.61□□□□□ -0.39
CXCL12-204ENST00000395793 RAB31Q13636 194 aa12.61□□□□□ -0.39
CXCL12-204ENST00000395793 ZNF493Q6ZR52 646 aa12.61□□□□□ -0.39
CXCL12-204ENST00000395793 Q6ZRG5 221 aa12.61□□□□□ -0.39
CXCL12-204ENST00000395793 LINC00612Q8N6U2 182 aa12.61□□□□□ -0.39
CXCL12-204ENST00000395793 OR1L4Q8NGR5 311 aa12.61□□□□□ -0.39
CXCL12-204ENST00000395793 OR10J6PQ8NGY7 276 aa12.61□□□□□ -0.39
CXCL12-204ENST00000395793 RNF141Q8WVD5 230 aa12.61□□□□□ -0.39
CXCL12-204ENST00000395793 C20orf144Q9BQM9 153 aa12.61□□□□□ -0.39
CXCL12-204ENST00000395793 J3KRW8 73 aa12.6□□□□□ -0.39
CXCL12-204ENST00000395793 NUDT3O95989 172 aa12.6□□□□□ -0.39
CXCL12-204ENST00000395793 PVALBP20472 110 aaPredicted RBP12.6□□□□□ -0.39
CXCL12-204ENST00000395793 ZNRF2Q8NHG8 242 aa12.6□□□□□ -0.39
CXCL12-204ENST00000395793 FAM240BA0A1B0GVZ2 78 aa12.59□□□□□ -0.39
CXCL12-204ENST00000395793 M0R3E3 92 aa12.59□□□□□ -0.39
CXCL12-204ENST00000395793 FGF7P21781 194 aa12.59□□□□□ -0.39
CXCL12-204ENST00000395793 S100A11P31949 105 aa12.59□□□□□ -0.39
CXCL12-204ENST00000395793 FAM3BP58499 235 aaPredicted RBP12.59□□□□□ -0.39
CXCL12-204ENST00000395793 GCSAMLQ5JQS6 135 aa12.59□□□□□ -0.39
CXCL12-204ENST00000395793 CHAC2Q8WUX2 184 aa12.59□□□□□ -0.39
CXCL12-204ENST00000395793 PFDN5Q99471 154 aa12.59□□□□□ -0.39
CXCL12-204ENST00000395793 ATG101Q9BSB4 218 aa12.59□□□□□ -0.39
CXCL12-204ENST00000395793 TRAV12-3A0A0B4J271 114 aa12.58□□□□□ -0.4
CXCL12-204ENST00000395793 ZNF253O75346 499 aa12.58□□□□□ -0.4
CXCL12-204ENST00000395793 NDUFB4O95168 129 aa12.58□□□□□ -0.4
CXCL12-204ENST00000395793 PYYP10082 97 aa12.58□□□□□ -0.4
CXCL12-204ENST00000395793 GUK1Q16774 197 aa12.58□□□□□ -0.4
CXCL12-204ENST00000395793 C1orf134Q5TEV5 83 aa12.58□□□□□ -0.4
CXCL12-204ENST00000395793 STX12Q86Y82 276 aa12.58□□□□□ -0.4
CXCL12-204ENST00000395793 ODF3Q96PU9 254 aa12.58□□□□□ -0.4
CXCL12-204ENST00000395793 GPN1Q9HCN4 374 aaPredicted RBP12.58□□□□□ -0.4
CXCL12-204ENST00000395793 LINC00588Q9Y4M8 146 aa12.58□□□□□ -0.4
CXCL12-204ENST00000395793 TRBV19A0A075B6N1 114 aa12.57□□□□□ -0.4
CXCL12-204ENST00000395793 SIX6O95475 246 aa12.57□□□□□ -0.4
CXCL12-204ENST00000395793 ERCC8Q13216 396 aa12.57□□□□□ -0.4
CXCL12-204ENST00000395793 ASAH1Q13510 395 aa12.57□□□□□ -0.4
CXCL12-204ENST00000395793 ZNF575Q86XF7 245 aa12.57□□□□□ -0.4
CXCL12-204ENST00000395793 MUC4Q99102 2169 aa12.57□□□□□ -0.4
CXCL12-204ENST00000395793 NBDYA0A0U1RRE5 68 aa12.56□□□□□ -0.4
CXCL12-204ENST00000395793 HOXA5P20719 270 aa12.56□□□□□ -0.4
CXCL12-204ENST00000395793 LEPP41159 167 aa12.56□□□□□ -0.4
CXCL12-204ENST00000395793 HBG1P69891 147 aa12.56□□□□□ -0.4
CXCL12-204ENST00000395793 HBG2P69892 147 aa12.56□□□□□ -0.4
CXCL12-204ENST00000395793 NHLH2Q02577 135 aa12.56□□□□□ -0.4
CXCL12-204ENST00000395793 TMEM14CQ9P0S9 112 aa12.56□□□□□ -0.4
CXCL12-204ENST00000395793 GAGE12BA1L429 117 aa12.55□□□□□ -0.4
CXCL12-204ENST00000395793 GAGE7O76087 117 aa12.55□□□□□ -0.4
CXCL12-204ENST00000395793 GAGE12FP0CL80 117 aa12.55□□□□□ -0.4
CXCL12-204ENST00000395793 GAGE12GP0CL81 117 aa12.55□□□□□ -0.4
CXCL12-204ENST00000395793 GAGE12IP0CL82 117 aa12.55□□□□□ -0.4
CXCL12-204ENST00000395793 MED14OSP0DP75 135 aa12.55□□□□□ -0.4
CXCL12-204ENST00000395793 HIST1H1EP10412 219 aaKnown RBP12.55□□□□□ -0.4
CXCL12-204ENST00000395793 ATP6V1FQ16864 119 aa12.55□□□□□ -0.4
CXCL12-204ENST00000395793 SOHLH1Q5JUK2 328 aa12.55□□□□□ -0.4
CXCL12-204ENST00000395793 MZT2BQ6NZ67 158 aa12.55□□□□□ -0.4
CXCL12-204ENST00000395793 CCDC28AQ8IWP9 274 aa12.55□□□□□ -0.4
CXCL12-204ENST00000395793 MRPL53Q96EL3 112 aaKnown RBP12.55□□□□□ -0.4
CXCL12-204ENST00000395793 FAM19A4Q96LR4 140 aa12.55□□□□□ -0.4
CXCL12-204ENST00000395793 SLC25A2Q9BXI2 301 aa12.55□□□□□ -0.4
CXCL12-204ENST00000395793 NPCDR1Q9BY65 106 aa12.55□□□□□ -0.4
CXCL12-204ENST00000395793 OR5AC2Q9NZP5 309 aa12.55□□□□□ -0.4
CXCL12-204ENST00000395793 H0YIZ8 118 aa12.54□□□□□ -0.4
CXCL12-204ENST00000395793 IFITM3Q01628 133 aa12.54□□□□□ -0.4
CXCL12-204ENST00000395793 TNP2Q05952 138 aa12.54□□□□□ -0.4
CXCL12-204ENST00000395793 LINC00299Q6ZSB3 139 aa12.54□□□□□ -0.4
CXCL12-204ENST00000395793 EXOC3-AS1Q8N2X6 119 aa12.54□□□□□ -0.4
CXCL12-204ENST00000395793 THAP6Q8TBB0 222 aa12.54□□□□□ -0.4
CXCL12-204ENST00000395793 FAM167A-AS1Q96KT0 104 aa12.54□□□□□ -0.4
CXCL12-204ENST00000395793 TRAV26-1A0A087WT03 109 aa12.53□□□□□ -0.4
CXCL12-204ENST00000395793 SNURFLB1AK76 121 aa12.53□□□□□ -0.4
CXCL12-204ENST00000395793 CCL18P55774 89 aa12.53□□□□□ -0.4
CXCL12-204ENST00000395793 CD300CQ08708 224 aa12.53□□□□□ -0.4
CXCL12-204ENST00000395793 BTN1A1Q13410 526 aa12.53□□□□□ -0.4
CXCL12-204ENST00000395793 OR5I1Q13606 314 aa12.53□□□□□ -0.4
CXCL12-204ENST00000395793 Q6ZTI0 123 aa12.53□□□□□ -0.4
CXCL12-204ENST00000395793 MIR17HGQ75NE6 70 aa12.53□□□□□ -0.4
CXCL12-204ENST00000395793 SSX7Q7RTT5 188 aa12.53□□□□□ -0.4
CXCL12-204ENST00000395793 OR5C1Q8NGR4 320 aa12.53□□□□□ -0.4
CXCL12-204ENST00000395793 BLNKQ8WV28 456 aa12.53□□□□□ -0.4
CXCL12-204ENST00000395793 PYGO2Q9BRQ0 406 aa12.53□□□□□ -0.4
CXCL12-204ENST00000395793 AGPAT4-IT1Q9H0P7 198 aa12.53□□□□□ -0.4
CXCL12-204ENST00000395793 A0A0J9YY99 117 aa12.52□□□□□ -0.41
CXCL12-204ENST00000395793 C7orf71A4D174 169 aa12.52□□□□□ -0.41
CXCL12-204ENST00000395793 KLLNB2CW77 178 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms