RNA–Protein interactions for RNA: ENST00000395761.3

CXCL1-201, Transcript of C-X-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CXCL1, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1-201ENST00000395761 PAXXQ9BUH6 204 aa12.13□□□□□ -0.47
CXCL1-201ENST00000395761 HRH4Q9H3N8 390 aa12.13□□□□□ -0.47
CXCL1-201ENST00000395761 MAP1LC3B2A6NCE7 125 aa12.12□□□□□ -0.47
CXCL1-201ENST00000395761 SPRY2O43597 315 aa12.12□□□□□ -0.47
CXCL1-201ENST00000395761 CA1P00915 261 aaPredicted RBP12.12□□□□□ -0.47
CXCL1-201ENST00000395761 PRB4P10163 310 aaPredicted RBP12.12□□□□□ -0.47
CXCL1-201ENST00000395761 HLA-DRB4P13762 266 aa12.12□□□□□ -0.47
CXCL1-201ENST00000395761 GUK1Q16774 197 aa12.12□□□□□ -0.47
CXCL1-201ENST00000395761 LCN15Q6UWW0 184 aa12.12□□□□□ -0.47
CXCL1-201ENST00000395761 FOXI2Q6ZQN5 318 aa12.12□□□□□ -0.47
CXCL1-201ENST00000395761 SFT2D1Q8WV19 159 aa12.12□□□□□ -0.47
CXCL1-201ENST00000395761 MAP1LC3BQ9GZQ8 125 aa12.12□□□□□ -0.47
CXCL1-201ENST00000395761 SAV1Q9H4B6 383 aaPredicted RBP12.12□□□□□ -0.47
CXCL1-201ENST00000395761 HLA-DRB4X5D2U9 266 aa12.12□□□□□ -0.47
CXCL1-201ENST00000395761 SLC17A3O00476 420 aa12.11□□□□□ -0.47
CXCL1-201ENST00000395761 HMGB3O15347 200 aaKnown RBP12.11□□□□□ -0.47
CXCL1-201ENST00000395761 OR7C2O60412 319 aa12.11□□□□□ -0.47
CXCL1-201ENST00000395761 EIF3GO75821 320 aaKnown RBP eCLIP12.11□□□□□ -0.47
CXCL1-201ENST00000395761 IGKV3-20P01619 116 aa12.11□□□□□ -0.47
CXCL1-201ENST00000395761 NBEAP1P0C6P0 100 aa12.11□□□□□ -0.47
CXCL1-201ENST00000395761 ARL14EPLP0DKL9 152 aa12.11□□□□□ -0.47
CXCL1-201ENST00000395761 PYYP10082 97 aa12.11□□□□□ -0.47
CXCL1-201ENST00000395761 GCHFRP30047 84 aa12.11□□□□□ -0.47
CXCL1-201ENST00000395761 LYPD6BQ8NI32 183 aa12.11□□□□□ -0.47
CXCL1-201ENST00000395761 RNF183Q96D59 192 aa12.11□□□□□ -0.47
CXCL1-201ENST00000395761 FXYD5Q96DB9 178 aa12.11□□□□□ -0.47
CXCL1-201ENST00000395761 WWC2-AS2Q96NR7 200 aa12.11□□□□□ -0.47
CXCL1-201ENST00000395761 ZNF586Q9NXT0 402 aa12.11□□□□□ -0.47
CXCL1-201ENST00000395761 HBE1P02100 147 aa12.1□□□□□ -0.47
CXCL1-201ENST00000395761 PDE6HQ13956 83 aa12.1□□□□□ -0.47
CXCL1-201ENST00000395761 ZNF331Q9NQX6 463 aaPredicted RBP12.1□□□□□ -0.47
CXCL1-201ENST00000395761 TMEM167BQ9NRX6 74 aa12.1□□□□□ -0.47
CXCL1-201ENST00000395761 TP53TG1Q9Y2A0 90 aa12.1□□□□□ -0.47
CXCL1-201ENST00000395761 TRBV19A0A075B6N1 114 aa12.09□□□□□ -0.47
CXCL1-201ENST00000395761 A0A0J9YX75 114 aa12.09□□□□□ -0.47
CXCL1-201ENST00000395761 TEX46H3BTG2 121 aa12.09□□□□□ -0.47
CXCL1-201ENST00000395761 ZNF253O75346 499 aa12.09□□□□□ -0.47
CXCL1-201ENST00000395761 ZNF705DP0CH99 300 aaPredicted RBP12.09□□□□□ -0.47
CXCL1-201ENST00000395761 ZNF705BP0CI00 300 aaPredicted RBP12.09□□□□□ -0.47
CXCL1-201ENST00000395761 PMS2P11Q13670 270 aa12.09□□□□□ -0.47
CXCL1-201ENST00000395761 PSG3Q16557 428 aa12.09□□□□□ -0.47
CXCL1-201ENST00000395761 EBLN2Q6P2I7 272 aa12.09□□□□□ -0.47
CXCL1-201ENST00000395761 MORN3Q6PF18 240 aaPredicted RBP12.09□□□□□ -0.47
CXCL1-201ENST00000395761 OR4B1Q8NGF8 309 aa12.09□□□□□ -0.47
CXCL1-201ENST00000395761 EDA2RQ9HAV5 297 aa12.09□□□□□ -0.47
CXCL1-201ENST00000395761 OR10J4P0C629 311 aa12.08□□□□□ -0.48
CXCL1-201ENST00000395761 FGF8P55075 233 aaPredicted RBP12.08□□□□□ -0.48
CXCL1-201ENST00000395761 FXYD7P58549 80 aa12.08□□□□□ -0.48
CXCL1-201ENST00000395761 UBE2L3P68036 154 aaKnown RBP12.08□□□□□ -0.48
CXCL1-201ENST00000395761 ZNF738Q8NE65 137 aa12.08□□□□□ -0.48
CXCL1-201ENST00000395761 SLC50A1Q9BRV3 221 aa12.08□□□□□ -0.48
CXCL1-201ENST00000395761 CLEC5AQ9NY25 188 aa12.08□□□□□ -0.48
CXCL1-201ENST00000395761 ZNF705FA8MVS1 300 aaPredicted RBP12.07□□□□□ -0.48
CXCL1-201ENST00000395761 RGS13O14921 159 aa12.07□□□□□ -0.48
CXCL1-201ENST00000395761 NDUFB4O95168 129 aa12.07□□□□□ -0.48
CXCL1-201ENST00000395761 PPT1P50897 306 aa12.07□□□□□ -0.48
CXCL1-201ENST00000395761 LYPD1Q8N2G4 141 aa12.07□□□□□ -0.48
CXCL1-201ENST00000395761 BLNKQ8WV28 456 aa12.07□□□□□ -0.48
CXCL1-201ENST00000395761 TMPRSS5Q9H3S3 457 aa12.07□□□□□ -0.48
CXCL1-201ENST00000395761 PRAC2D3DTV9 90 aa12.06□□□□□ -0.48
CXCL1-201ENST00000395761 NMBP08949 121 aa12.06□□□□□ -0.48
CXCL1-201ENST00000395761 CNN1P51911 297 aaKnown RBP12.06□□□□□ -0.48
CXCL1-201ENST00000395761 CCL20P78556 96 aa12.06□□□□□ -0.48
CXCL1-201ENST00000395761 CSNK1G2-AS1Q8NCQ2 148 aa12.06□□□□□ -0.48
CXCL1-201ENST00000395761 RPUSD4Q96CM3 377 aaKnown RBP12.06□□□□□ -0.48
CXCL1-201ENST00000395761 CLUHP3Q96NS8 147 aa12.06□□□□□ -0.48
CXCL1-201ENST00000395761 SLC35B3Q9H1N7 401 aa12.06□□□□□ -0.48
CXCL1-201ENST00000395761 XCL2Q9UBD3 114 aa12.06□□□□□ -0.48
CXCL1-201ENST00000395761 ARL2-SNX15V9GYD0 113 aa12.06□□□□□ -0.48
CXCL1-201ENST00000395761 A0A1W2PRE2 83 aa12.05□□□□□ -0.48
CXCL1-201ENST00000395761 RAB14P61106 215 aa12.05□□□□□ -0.48
CXCL1-201ENST00000395761 NUTF2P61970 127 aaKnown RBP12.05□□□□□ -0.48
CXCL1-201ENST00000395761 PSG9Q00887 426 aa12.05□□□□□ -0.48
CXCL1-201ENST00000395761 CLLU1Q5K131 121 aa12.05□□□□□ -0.48
CXCL1-201ENST00000395761 OR8A1Q8NGG7 326 aa12.05□□□□□ -0.48
CXCL1-201ENST00000395761 OR11H2Q8NH07 326 aa12.05□□□□□ -0.48
CXCL1-201ENST00000395761 RARRES2Q99969 163 aa12.05□□□□□ -0.48
CXCL1-201ENST00000395761 A8MTW9 85 aa12.04□□□□□ -0.48
CXCL1-201ENST00000395761 DUSP14O95147 198 aaKnown RBP12.04□□□□□ -0.48
CXCL1-201ENST00000395761 HIST1H1AQ02539 215 aaPredicted RBP12.04□□□□□ -0.48
CXCL1-201ENST00000395761 AMTNQ6UX39 209 aa12.04□□□□□ -0.48
CXCL1-201ENST00000395761 EXOC3-AS1Q8N2X6 119 aa12.04□□□□□ -0.48
CXCL1-201ENST00000395761 IQCF2Q8IXL9 164 aa12.03□□□□□ -0.48
CXCL1-201ENST00000395761 ARL6IP6Q8N6S5 226 aa12.03□□□□□ -0.48
CXCL1-201ENST00000395761 NKX6-2Q9C056 277 aaPredicted RBP12.03□□□□□ -0.48
CXCL1-201ENST00000395761 PRELID1Q9Y255 219 aa12.03□□□□□ -0.48
CXCL1-201ENST00000395761 DNAH7Q8WXX0 4024 aa12.02□□□□□ -0.49
CXCL1-201ENST00000395761 A0A0J9YWU9 116 aa12.02□□□□□ -0.49
CXCL1-201ENST00000395761 A0A1B0GV50 99 aa12.02□□□□□ -0.49
CXCL1-201ENST00000395761 M0R3E3 92 aa12.02□□□□□ -0.49
CXCL1-201ENST00000395761 TAGLN2P37802 199 aaKnown RBP12.02□□□□□ -0.49
CXCL1-201ENST00000395761 RANP62826 216 aaKnown RBP12.02□□□□□ -0.49
CXCL1-201ENST00000395761 MRPL53Q96EL3 112 aaKnown RBP12.02□□□□□ -0.49
CXCL1-201ENST00000395761 C1QTNF4Q9BXJ3 329 aa12.02□□□□□ -0.49
CXCL1-201ENST00000395761 Q9H3A6 140 aa12.02□□□□□ -0.49
CXCL1-201ENST00000395761 AAMDCQ9H7C9 122 aa12.02□□□□□ -0.49
CXCL1-201ENST00000395761 MANBALQ9NQG1 85 aa12.02□□□□□ -0.49
CXCL1-201ENST00000395761 OTORQ9NRC9 128 aa12.02□□□□□ -0.49
CXCL1-201ENST00000395761 PGPA6NDG6 321 aa12.01□□□□□ -0.49
CXCL1-201ENST00000395761 FAM74A7A6NL05 159 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 147.1 ms