RNA–Protein interactions for RNA: ENST00000395305.7

HLA-DMA-203, Transcript of major histocompatibility complex, class II, DM alpha, humanhuman

BASIC

Gene HLA-DMA, Length 777 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMA-203ENST00000395305 ZNF767PQ75MW2 155 aa10□□□□□ -0.81
HLA-DMA-203ENST00000395305 TMEM256Q8N2U0 113 aa10□□□□□ -0.81
HLA-DMA-203ENST00000395305 ATP5SQ99766 215 aa10□□□□□ -0.81
HLA-DMA-203ENST00000395305 TRAV12-2A0A075B6T6 113 aa9.99□□□□□ -0.81
HLA-DMA-203ENST00000395305 PRAC2D3DTV9 90 aa9.99□□□□□ -0.81
HLA-DMA-203ENST00000395305 TSPOP30536 169 aa9.99□□□□□ -0.81
HLA-DMA-203ENST00000395305 CDKN1BP46527 198 aa9.99□□□□□ -0.81
HLA-DMA-203ENST00000395305 PDE6HQ13956 83 aa9.99□□□□□ -0.81
HLA-DMA-203ENST00000395305 OXA1LQ15070 435 aa9.99□□□□□ -0.81
HLA-DMA-203ENST00000395305 FAM222AQ5U5X8 452 aa9.99□□□□□ -0.81
HLA-DMA-203ENST00000395305 BAP18Q8IXM2 172 aa9.99□□□□□ -0.81
HLA-DMA-203ENST00000395305 SCGB1C1Q8TD33 95 aa9.99□□□□□ -0.81
HLA-DMA-203ENST00000395305 MRPL53Q96EL3 112 aaKnown RBP9.99□□□□□ -0.81
HLA-DMA-203ENST00000395305 NIPSNAP3BQ9BS92 247 aa9.99□□□□□ -0.81
HLA-DMA-203ENST00000395305 MBD2Q9UBB5 411 aa9.99□□□□□ -0.81
HLA-DMA-203ENST00000395305 PRELID1Q9Y255 219 aa9.99□□□□□ -0.81
HLA-DMA-203ENST00000395305 TIMM9Q9Y5J7 89 aa9.99□□□□□ -0.81
HLA-DMA-203ENST00000395305 IGHV4-4A0A075B6R2 117 aa9.98□□□□□ -0.81
HLA-DMA-203ENST00000395305 ZNF705GA8MUZ8 300 aaPredicted RBP9.98□□□□□ -0.81
HLA-DMA-203ENST00000395305 NDUFB4O95168 129 aa9.98□□□□□ -0.81
HLA-DMA-203ENST00000395305 IFNA5P01569 189 aa9.98□□□□□ -0.81
HLA-DMA-203ENST00000395305 PYYP10082 97 aa9.98□□□□□ -0.81
HLA-DMA-203ENST00000395305 PRB4P10163 310 aaPredicted RBP9.98□□□□□ -0.81
HLA-DMA-203ENST00000395305 MIR17HGQ75NE6 70 aa9.98□□□□□ -0.81
HLA-DMA-203ENST00000395305 RPP25LQ8N5L8 163 aaKnown RBP9.98□□□□□ -0.81
HLA-DMA-203ENST00000395305 FAM167A-AS1Q96KT0 104 aa9.98□□□□□ -0.81
HLA-DMA-203ENST00000395305 LINC01587Q99440 93 aa9.98□□□□□ -0.81
HLA-DMA-203ENST00000395305 SLC25A2Q9BXI2 301 aa9.98□□□□□ -0.81
HLA-DMA-203ENST00000395305 MRPL32Q9BYC8 188 aaKnown RBP9.98□□□□□ -0.81
HLA-DMA-203ENST00000395305 PARD6GQ9BYG4 376 aaPredicted RBP9.98□□□□□ -0.81
HLA-DMA-203ENST00000395305 MED28Q9H204 178 aa9.98□□□□□ -0.81
HLA-DMA-203ENST00000395305 YTHDF2Q9Y5A9 579 aaKnown RBP9.98□□□□□ -0.81
HLA-DMA-203ENST00000395305 PRM2P04554 102 aa9.97□□□□□ -0.81
HLA-DMA-203ENST00000395305 NBEAP1P0C6P0 100 aa9.97□□□□□ -0.81
HLA-DMA-203ENST00000395305 TAS2R60P59551 318 aa9.97□□□□□ -0.81
HLA-DMA-203ENST00000395305 BLNKQ8WV28 456 aa9.97□□□□□ -0.81
HLA-DMA-203ENST00000395305 C20orf144Q9BQM9 153 aa9.97□□□□□ -0.81
HLA-DMA-203ENST00000395305 OR51M1Q9H341 326 aa9.97□□□□□ -0.81
HLA-DMA-203ENST00000395305 PLA2G2EQ9NZK7 142 aa9.97□□□□□ -0.81
HLA-DMA-203ENST00000395305 FUT9Q9Y231 359 aa9.97□□□□□ -0.81
HLA-DMA-203ENST00000395305 NPIPB6E9PJ23 425 aa9.96□□□□□ -0.82
HLA-DMA-203ENST00000395305 AZU1P20160 251 aa9.96□□□□□ -0.82
HLA-DMA-203ENST00000395305 FCN2Q15485 313 aa9.96□□□□□ -0.82
HLA-DMA-203ENST00000395305 FAM210BQ96KR6 192 aa9.96□□□□□ -0.82
HLA-DMA-203ENST00000395305 ODF3Q96PU9 254 aa9.96□□□□□ -0.82
HLA-DMA-203ENST00000395305 SMIM3Q9BZL3 60 aa9.96□□□□□ -0.82
HLA-DMA-203ENST00000395305 WFDC1Q9HC57 220 aa9.96□□□□□ -0.82
HLA-DMA-203ENST00000395305 LYRM9A8MSI8 78 aa9.95□□□□□ -0.82
HLA-DMA-203ENST00000395305 M0R3E3 92 aa9.95□□□□□ -0.82
HLA-DMA-203ENST00000395305 CT45A10P0DMU9 189 aa9.95□□□□□ -0.82
HLA-DMA-203ENST00000395305 LEPP41159 167 aa9.95□□□□□ -0.82
HLA-DMA-203ENST00000395305 FFAR4Q5NUL3 377 aa9.95□□□□□ -0.82
HLA-DMA-203ENST00000395305 RNF141Q8WVD5 230 aa9.95□□□□□ -0.82
HLA-DMA-203ENST00000395305 LINC00477Q96M19 166 aa9.95□□□□□ -0.82
HLA-DMA-203ENST00000395305 PAXXQ9BUH6 204 aa9.95□□□□□ -0.82
HLA-DMA-203ENST00000395305 AAMDCQ9H7C9 122 aa9.95□□□□□ -0.82
HLA-DMA-203ENST00000395305 VPS13DQ5THJ4 4388 aa9.95□□□□□ -0.82
HLA-DMA-203ENST00000395305 H7BYZ3 331 aa9.94□□□□□ -0.82
HLA-DMA-203ENST00000395305 DAD1P61803 113 aa9.94□□□□□ -0.82
HLA-DMA-203ENST00000395305 ICAM4Q14773 271 aa9.94□□□□□ -0.82
HLA-DMA-203ENST00000395305 KIR3DS1Q14943 382 aa9.94□□□□□ -0.82
HLA-DMA-203ENST00000395305 ZNF493Q6ZR52 646 aa9.94□□□□□ -0.82
HLA-DMA-203ENST00000395305 EXOC3-AS1Q8N2X6 119 aa9.94□□□□□ -0.82
HLA-DMA-203ENST00000395305 ASB13Q8WXK3 278 aa9.94□□□□□ -0.82
HLA-DMA-203ENST00000395305 FXYD5Q96DB9 178 aa9.94□□□□□ -0.82
HLA-DMA-203ENST00000395305 NDUFAF3Q9BU61 184 aa9.94□□□□□ -0.82
HLA-DMA-203ENST00000395305 PLAC8L1A1L4L8 177 aa9.93□□□□□ -0.82
HLA-DMA-203ENST00000395305 HTN1P15515 57 aa9.93□□□□□ -0.82
HLA-DMA-203ENST00000395305 GFI1BQ5VTD9 330 aa9.93□□□□□ -0.82
HLA-DMA-203ENST00000395305 C9orf47Q6ZRZ4 202 aa9.93□□□□□ -0.82
HLA-DMA-203ENST00000395305 LYPD1Q8N2G4 141 aa9.93□□□□□ -0.82
HLA-DMA-203ENST00000395305 C16orf74Q96GX8 76 aa9.93□□□□□ -0.82
HLA-DMA-203ENST00000395305 AGPAT4-IT1Q9H0P7 198 aa9.93□□□□□ -0.82
HLA-DMA-203ENST00000395305 KMT2AQ03164 3969 aa9.92□□□□□ -0.82
HLA-DMA-203ENST00000395305 OR10J4P0C629 311 aa9.92□□□□□ -0.82
HLA-DMA-203ENST00000395305 TAS2R45P59539 299 aa9.92□□□□□ -0.82
HLA-DMA-203ENST00000395305 ERCC8Q13216 396 aa9.92□□□□□ -0.82
HLA-DMA-203ENST00000395305 ACOT6Q3I5F7 207 aaPredicted RBP9.92□□□□□ -0.82
HLA-DMA-203ENST00000395305 CCDC28AQ8IWP9 274 aa9.92□□□□□ -0.82
HLA-DMA-203ENST00000395305 ZNF503Q96F45 646 aa9.92□□□□□ -0.82
HLA-DMA-203ENST00000395305 AQP10Q96PS8 301 aa9.92□□□□□ -0.82
HLA-DMA-203ENST00000395305 TIMM8BQ9Y5J9 83 aaPredicted RBP9.92□□□□□ -0.82
HLA-DMA-203ENST00000395305 OR7C2O60412 319 aa9.91□□□□□ -0.82
HLA-DMA-203ENST00000395305 SLC25A5P05141 298 aaKnown RBP9.91□□□□□ -0.82
HLA-DMA-203ENST00000395305 GIPP09681 153 aaPredicted RBP9.91□□□□□ -0.82
HLA-DMA-203ENST00000395305 M6PRP20645 277 aa9.91□□□□□ -0.82
HLA-DMA-203ENST00000395305 RGS21Q2M5E4 152 aa9.91□□□□□ -0.82
HLA-DMA-203ENST00000395305 KHDC3LQ587J8 217 aa9.91□□□□□ -0.82
HLA-DMA-203ENST00000395305 FAM122CQ6P4D5 195 aa9.91□□□□□ -0.82
HLA-DMA-203ENST00000395305 RNASE8Q8TDE3 154 aaKnown RBP9.91□□□□□ -0.82
HLA-DMA-203ENST00000395305 TMEM263Q8WUH6 116 aaKnown RBP9.91□□□□□ -0.82
HLA-DMA-203ENST00000395305 FAM19A4Q96LR4 140 aa9.91□□□□□ -0.82
HLA-DMA-203ENST00000395305 TRAV12-3A0A0B4J271 114 aa9.9□□□□□ -0.82
HLA-DMA-203ENST00000395305 A0A1W2PPV4 95 aa9.9□□□□□ -0.82
HLA-DMA-203ENST00000395305 CBY3A6NI87 242 aa9.9□□□□□ -0.82
HLA-DMA-203ENST00000395305 J3KRW8 73 aa9.9□□□□□ -0.82
HLA-DMA-203ENST00000395305 NMBP08949 121 aa9.9□□□□□ -0.82
HLA-DMA-203ENST00000395305 P0DMU3 169 aa9.9□□□□□ -0.82
HLA-DMA-203ENST00000395305 FAM231AP0DMU4 169 aa9.9□□□□□ -0.82
HLA-DMA-203ENST00000395305 FAM231CP0DMU5 169 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms