RNA–Protein interactions for RNA: ENST00000394820.8

NFKB1-202, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NFKB1, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-202ENST00000394820 HIST1H1AQ02539 215 aaPredicted RBP10.55□□□□□ -0.72
NFKB1-202ENST00000394820 ANKRD39Q53RE8 183 aa10.55□□□□□ -0.72
NFKB1-202ENST00000394820 RUSC1-AS1Q66K80 236 aa10.55□□□□□ -0.72
NFKB1-202ENST00000394820 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.55□□□□□ -0.72
NFKB1-202ENST00000394820 OR1N2Q8NGR9 330 aa10.55□□□□□ -0.72
NFKB1-202ENST00000394820 IFI27L1Q96BM0 104 aa10.55□□□□□ -0.72
NFKB1-202ENST00000394820 UBTD1Q9HAC8 227 aa10.55□□□□□ -0.72
NFKB1-202ENST00000394820 RABAC1Q9UI14 185 aa10.55□□□□□ -0.72
NFKB1-202ENST00000394820 POLQO75417 2590 aa10.55□□□□□ -0.72
NFKB1-202ENST00000394820 IGKV3-20P01619 116 aa10.55□□□□□ -0.72
NFKB1-202ENST00000394820 FAM120AOSQ5T036 256 aa10.55□□□□□ -0.72
NFKB1-202ENST00000394820 BCL6BQ8N143 479 aaPredicted RBP10.55□□□□□ -0.72
NFKB1-202ENST00000394820 ZNF418Q8TF45 676 aaPredicted RBP10.55□□□□□ -0.72
NFKB1-202ENST00000394820 VWC2LB2RUY7 222 aa10.55□□□□□ -0.72
NFKB1-202ENST00000394820 GATA1P15976 413 aaPredicted RBP10.55□□□□□ -0.72
NFKB1-202ENST00000394820 AMTNQ6UX39 209 aa10.55□□□□□ -0.72
NFKB1-202ENST00000394820 ASCL5Q7RTU5 278 aa10.55□□□□□ -0.72
NFKB1-202ENST00000394820 RNF125Q96EQ8 232 aa10.55□□□□□ -0.72
NFKB1-202ENST00000394820 FAM90A9PA6NNJ1 464 aa10.54□□□□□ -0.72
NFKB1-202ENST00000394820 IGLV3-9A0A075B6K5 115 aa10.54□□□□□ -0.72
NFKB1-202ENST00000394820 CEACAM4O75871 244 aa10.54□□□□□ -0.72
NFKB1-202ENST00000394820 ERCC8Q13216 396 aa10.54□□□□□ -0.72
NFKB1-202ENST00000394820 MSRB1Q9NZV6 116 aa10.54□□□□□ -0.72
NFKB1-202ENST00000394820 JKAMPQ9P055 326 aa10.54□□□□□ -0.72
NFKB1-202ENST00000394820 DKK2Q9UBU2 259 aa10.54□□□□□ -0.72
NFKB1-202ENST00000394820 C2orf70A6NJV1 201 aa10.54□□□□□ -0.72
NFKB1-202ENST00000394820 APOMO95445 188 aa10.54□□□□□ -0.72
NFKB1-202ENST00000394820 LHBP01229 141 aa10.54□□□□□ -0.72
NFKB1-202ENST00000394820 C8orf46Q8TAG6 207 aa10.54□□□□□ -0.72
NFKB1-202ENST00000394820 C1RLQ9NZP8 487 aa10.54□□□□□ -0.72
NFKB1-202ENST00000394820 CD3EP07766 207 aa10.53□□□□□ -0.72
NFKB1-202ENST00000394820 GRNP28799 593 aaKnown RBP10.53□□□□□ -0.72
NFKB1-202ENST00000394820 LGALS7P47929 136 aa10.53□□□□□ -0.72
NFKB1-202ENST00000394820 MEF2CQ06413 473 aaPredicted RBP10.53□□□□□ -0.72
NFKB1-202ENST00000394820 PET117Q6UWS5 81 aa10.53□□□□□ -0.72
NFKB1-202ENST00000394820 OR5AN1Q8NGI8 311 aa10.53□□□□□ -0.72
NFKB1-202ENST00000394820 MYOZ3Q8TDC0 251 aa10.53□□□□□ -0.72
NFKB1-202ENST00000394820 IGF2BP2-AS1Q96M15 143 aa10.53□□□□□ -0.72
NFKB1-202ENST00000394820 SCGB2A1O75556 95 aa10.53□□□□□ -0.72
NFKB1-202ENST00000394820 TMPRSS3P57727 454 aa10.53□□□□□ -0.72
NFKB1-202ENST00000394820 RBPJQ06330 500 aa10.53□□□□□ -0.72
NFKB1-202ENST00000394820 Q86TA4 180 aa10.53□□□□□ -0.72
NFKB1-202ENST00000394820 FER1L6-AS1Q8NA97 138 aa10.53□□□□□ -0.72
NFKB1-202ENST00000394820 DDB2Q92466 427 aa10.53□□□□□ -0.72
NFKB1-202ENST00000394820 MAP1LC3AQ9H492 121 aa10.53□□□□□ -0.72
NFKB1-202ENST00000394820 PRSS46E5RG02 174 aa10.53□□□□□ -0.72
NFKB1-202ENST00000394820 TAX1BP3O14907 124 aa10.53□□□□□ -0.72
NFKB1-202ENST00000394820 SMIM13P0DJ93 91 aa10.53□□□□□ -0.72
NFKB1-202ENST00000394820 PSG3Q16557 428 aa10.53□□□□□ -0.72
NFKB1-202ENST00000394820 IGFL3Q6UXB1 125 aa10.53□□□□□ -0.72
NFKB1-202ENST00000394820 RNF182Q8N6D2 247 aa10.53□□□□□ -0.72
NFKB1-202ENST00000394820 TMEM167AQ8TBQ9 72 aa10.53□□□□□ -0.72
NFKB1-202ENST00000394820 LOC105371242A0A075B767 164 aa10.52□□□□□ -0.72
NFKB1-202ENST00000394820 TRAV26-2A0A0B4J265 109 aa10.52□□□□□ -0.72
NFKB1-202ENST00000394820 CTRLP40313 264 aa10.52□□□□□ -0.73
NFKB1-202ENST00000394820 Q1RN00 199 aa10.52□□□□□ -0.73
NFKB1-202ENST00000394820 FAM71F2Q6NXP2 309 aa10.52□□□□□ -0.73
NFKB1-202ENST00000394820 Q8N976 141 aa10.52□□□□□ -0.73
NFKB1-202ENST00000394820 IGHV2-70DA0A0C4DH43 119 aa10.52□□□□□ -0.73
NFKB1-202ENST00000394820 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.52□□□□□ -0.73
NFKB1-202ENST00000394820 THBDP07204 575 aa10.52□□□□□ -0.73
NFKB1-202ENST00000394820 RHOGP84095 191 aa10.52□□□□□ -0.73
NFKB1-202ENST00000394820 RNASE6Q93091 150 aaKnown RBP10.52□□□□□ -0.73
NFKB1-202ENST00000394820 TIMD4Q96H15 378 aa10.52□□□□□ -0.73
NFKB1-202ENST00000394820 JMJD8Q96S16 334 aa10.52□□□□□ -0.73
NFKB1-202ENST00000394820 OTORQ9NRC9 128 aa10.52□□□□□ -0.73
NFKB1-202ENST00000394820 IGHV1-8P0DP01 117 aa10.51□□□□□ -0.73
NFKB1-202ENST00000394820 SRD5A1P18405 259 aa10.51□□□□□ -0.73
NFKB1-202ENST00000394820 NDPQ00604 133 aa10.51□□□□□ -0.73
NFKB1-202ENST00000394820 ZC2HC1BQ5TFG8 222 aa10.51□□□□□ -0.73
NFKB1-202ENST00000394820 CHCHD1Q96BP2 118 aaKnown RBP10.51□□□□□ -0.73
NFKB1-202ENST00000394820 SIGLEC9Q9Y336 463 aa10.51□□□□□ -0.73
NFKB1-202ENST00000394820 CCL21O00585 134 aa10.51□□□□□ -0.73
NFKB1-202ENST00000394820 J3QR89 54 aa10.51□□□□□ -0.73
NFKB1-202ENST00000394820 HBDP02042 147 aa10.51□□□□□ -0.73
NFKB1-202ENST00000394820 RBX1P62877 108 aa10.51□□□□□ -0.73
NFKB1-202ENST00000394820 SAMD5Q5TGI4 173 aa10.51□□□□□ -0.73
NFKB1-202ENST00000394820 COL25A1Q9BXS0 654 aaPredicted RBP10.51□□□□□ -0.73
NFKB1-202ENST00000394820 BEX4Q9NWD9 120 aaPredicted RBP10.51□□□□□ -0.73
NFKB1-202ENST00000394820 A0A1B0GWB2 263 aa10.5□□□□□ -0.73
NFKB1-202ENST00000394820 E7EQL1 145 aa10.5□□□□□ -0.73
NFKB1-202ENST00000394820 TMEM178BH3BS89 294 aa10.5□□□□□ -0.73
NFKB1-202ENST00000394820 TOMM40O96008 361 aa10.5□□□□□ -0.73
NFKB1-202ENST00000394820 VKORC1Q9BQB6 163 aa10.5□□□□□ -0.73
NFKB1-202ENST00000394820 SH2D1AO60880 128 aa10.5□□□□□ -0.73
NFKB1-202ENST00000394820 MFAP4P55083 255 aa10.5□□□□□ -0.73
NFKB1-202ENST00000394820 C3orf36Q3SXR2 165 aa10.5□□□□□ -0.73
NFKB1-202ENST00000394820 SIGLEC8Q9NYZ4 499 aa10.5□□□□□ -0.73
NFKB1-202ENST00000394820 PAX1P15863 534 aa10.49□□□□□ -0.73
NFKB1-202ENST00000394820 FAM74A4Q5TZK3 123 aa10.49□□□□□ -0.73
NFKB1-202ENST00000394820 ATP5L2Q7Z4Y8 100 aa10.49□□□□□ -0.73
NFKB1-202ENST00000394820 CTSZQ9UBR2 303 aa10.49□□□□□ -0.73
NFKB1-202ENST00000394820 IGHV1-3A0A0C4DH29 117 aa10.49□□□□□ -0.73
NFKB1-202ENST00000394820 NPYP01303 97 aa10.49□□□□□ -0.73
NFKB1-202ENST00000394820 CLEC19AQ6UXS0 136 aa10.49□□□□□ -0.73
NFKB1-202ENST00000394820 CD5LO43866 347 aa10.49□□□□□ -0.73
NFKB1-202ENST00000394820 ETDBQ3ZM63 59 aa10.49□□□□□ -0.73
NFKB1-202ENST00000394820 Q8NA96 180 aa10.49□□□□□ -0.73
NFKB1-202ENST00000394820 C21orf62Q9NYP8 219 aa10.49□□□□□ -0.73
NFKB1-202ENST00000394820 CYSLTR1Q9Y271 337 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms