RNA–Protein interactions for RNA: ENST00000393952.3

LRFN4-202, Transcript of leucine rich repeat and fibronectin type III domain containing 4, humanhuman

TSL 5 BASIC

Gene LRFN4, Length 1,550 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN4-202ENST00000393952 PEX7O00628 323 aa18.19■□□□□ 0.5
LRFN4-202ENST00000393952 PSG3Q16557 428 aa18.19■□□□□ 0.5
LRFN4-202ENST00000393952 C11orf52Q96A22 123 aa18.19■□□□□ 0.5
LRFN4-202ENST00000393952 LINC00052Q96N35 136 aa18.19■□□□□ 0.5
LRFN4-202ENST00000393952 TCEAL7Q9BRU2 100 aa18.19■□□□□ 0.5
LRFN4-202ENST00000393952 NOTCH3Q9UM47 2321 aa18.18■□□□□ 0.5
LRFN4-202ENST00000393952 NDUFS6O75380 124 aaKnown RBP18.18■□□□□ 0.5
LRFN4-202ENST00000393952 SFTA3P0C7M3 94 aa18.18■□□□□ 0.5
LRFN4-202ENST00000393952 ID1P41134 155 aa18.18■□□□□ 0.5
LRFN4-202ENST00000393952 C9orf66Q5T8R8 295 aa18.18■□□□□ 0.5
LRFN4-202ENST00000393952 LCN12Q6JVE5 192 aa18.18■□□□□ 0.5
LRFN4-202ENST00000393952 SPAG8Q99932 426 aaPredicted RBP18.18■□□□□ 0.5
LRFN4-202ENST00000393952 CLEC5AQ9NY25 188 aa18.18■□□□□ 0.5
LRFN4-202ENST00000393952 PRELID1Q9Y255 219 aa18.18■□□□□ 0.5
LRFN4-202ENST00000393952 TRAV2A0A0B4J234 112 aa18.17■□□□□ 0.5
LRFN4-202ENST00000393952 TCRAP04437 139 aa18.17■□□□□ 0.5
LRFN4-202ENST00000393952 ZNF688P0C7X2 276 aa18.17■□□□□ 0.5
LRFN4-202ENST00000393952 GUCA2BQ16661 112 aa18.17■□□□□ 0.5
LRFN4-202ENST00000393952 OR2K2Q8NGT1 345 aa18.17■□□□□ 0.5
LRFN4-202ENST00000393952 ANK2Q01484 3957 aa18.17■□□□□ 0.5
LRFN4-202ENST00000393952 SORL1Q92673 2214 aa18.17■□□□□ 0.5
LRFN4-202ENST00000393952 TMEM218A2RU14 115 aa18.17■□□□□ 0.5
LRFN4-202ENST00000393952 DIRC3C9JPN6 131 aa18.17■□□□□ 0.5
LRFN4-202ENST00000393952 PRAC2D3DTV9 90 aa18.17■□□□□ 0.5
LRFN4-202ENST00000393952 CSN1S1P47710 185 aa18.17■□□□□ 0.5
LRFN4-202ENST00000393952 GOLT1AQ6ZVE7 132 aa18.17■□□□□ 0.5
LRFN4-202ENST00000393952 ZNF738Q8NE65 137 aa18.17■□□□□ 0.5
LRFN4-202ENST00000393952 HIST1H2BAQ96A08 127 aa18.17■□□□□ 0.5
LRFN4-202ENST00000393952 RPUSD4Q96CM3 377 aaKnown RBP18.17■□□□□ 0.5
LRFN4-202ENST00000393952 MRPL53Q96EL3 112 aaKnown RBP18.17■□□□□ 0.5
LRFN4-202ENST00000393952 ATG101Q9BSB4 218 aa18.17■□□□□ 0.5
LRFN4-202ENST00000393952 DERL1Q9BUN8 251 aa18.17■□□□□ 0.5
LRFN4-202ENST00000393952 MCRIP2Q9BUT9 160 aaKnown RBP18.17■□□□□ 0.5
LRFN4-202ENST00000393952 IGLL1P15814 213 aa18.16■□□□□ 0.5
LRFN4-202ENST00000393952 C2CD4CQ8TF44 421 aa18.16■□□□□ 0.5
LRFN4-202ENST00000393952 OR4C46A6NHA9 309 aa18.15■□□□□ 0.5
LRFN4-202ENST00000393952 INSL3P51460 131 aa18.15■□□□□ 0.5
LRFN4-202ENST00000393952 LINC00479Q96M42 142 aa18.15■□□□□ 0.5
LRFN4-202ENST00000393952 ZNF256Q9Y2P7 627 aaPredicted RBP18.15■□□□□ 0.5
LRFN4-202ENST00000393952 IGKV2-40A0A087WW87 121 aaPredicted RBP18.14■□□□□ 0.49
LRFN4-202ENST00000393952 IGKV2D-40P01614 121 aaPredicted RBP18.14■□□□□ 0.49
LRFN4-202ENST00000393952 AKR1C3P42330 323 aa18.14■□□□□ 0.49
LRFN4-202ENST00000393952 DEFB1P60022 68 aa18.14■□□□□ 0.49
LRFN4-202ENST00000393952 SNRPD3P62318 126 aaKnown RBP18.14■□□□□ 0.49
LRFN4-202ENST00000393952 PSMG4Q5JS54 123 aa18.14■□□□□ 0.49
LRFN4-202ENST00000393952 TRAV34A0A0B4J273 112 aa18.13■□□□□ 0.49
LRFN4-202ENST00000393952 ZNF674Q2M3X9 581 aa18.13■□□□□ 0.49
LRFN4-202ENST00000393952 SOHLH1Q5JUK2 328 aa18.13■□□□□ 0.49
LRFN4-202ENST00000393952 ARL6IP6Q8N6S5 226 aa18.13■□□□□ 0.49
LRFN4-202ENST00000393952 PARLQ9H300 379 aa18.13■□□□□ 0.49
LRFN4-202ENST00000393952 ADCYAP1P18509 176 aa18.13■□□□□ 0.49
LRFN4-202ENST00000393952 SGK494Q96LW2 274 aa18.13■□□□□ 0.49
LRFN4-202ENST00000393952 RPL35P42766 123 aaKnown RBP18.12■□□□□ 0.49
LRFN4-202ENST00000393952 CNN1P51911 297 aaKnown RBP18.12■□□□□ 0.49
LRFN4-202ENST00000393952 ATP6V1G1O75348 118 aa18.11■□□□□ 0.49
LRFN4-202ENST00000393952 TRAV8-1A0A0A6YYK1 113 aa18.1■□□□□ 0.49
LRFN4-202ENST00000393952 F6UB75 175 aa18.1■□□□□ 0.49
LRFN4-202ENST00000393952 SMIM7Q9BQ49 75 aa18.1■□□□□ 0.49
LRFN4-202ENST00000393952 KLF12Q9Y4X4 402 aa18.1■□□□□ 0.49
LRFN4-202ENST00000393952 ZNF727A8MUV8 499 aa18.09■□□□□ 0.49
LRFN4-202ENST00000393952 F8W036 122 aa18.09■□□□□ 0.49
LRFN4-202ENST00000393952 K7EQM0 130 aa18.09■□□□□ 0.49
LRFN4-202ENST00000393952 ZNF705DP0CH99 300 aaPredicted RBP18.09■□□□□ 0.49
LRFN4-202ENST00000393952 ZNF705BP0CI00 300 aaPredicted RBP18.09■□□□□ 0.49
LRFN4-202ENST00000393952 DEFB131AP59861 70 aa18.09■□□□□ 0.49
LRFN4-202ENST00000393952 VGLL1Q99990 258 aa18.09■□□□□ 0.49
LRFN4-202ENST00000393952 MAP6D1Q9H9H5 199 aa18.09■□□□□ 0.49
LRFN4-202ENST00000393952 SERTM2A0A1B0GWG4 89 aa18.08■□□□□ 0.49
LRFN4-202ENST00000393952 IGLV2-11P01706 119 aa18.08■□□□□ 0.49
LRFN4-202ENST00000393952 ERCC8Q13216 396 aa18.08■□□□□ 0.49
LRFN4-202ENST00000393952 BEAN1Q3B7T3 259 aa18.08■□□□□ 0.49
LRFN4-202ENST00000393952 PRR31Q5SQ13 230 aa18.08■□□□□ 0.49
LRFN4-202ENST00000393952 CMYA5Q8N3K9 4069 aa18.08■□□□□ 0.48
LRFN4-202ENST00000393952 UBE2G1P62253 170 aa18.08■□□□□ 0.48
LRFN4-202ENST00000393952 TMEM183BQ1AE95 376 aa18.08■□□□□ 0.48
LRFN4-202ENST00000393952 ODF3L2Q3SX64 289 aa18.08■□□□□ 0.48
LRFN4-202ENST00000393952 TMEM75Q8N9X5 138 aa18.08■□□□□ 0.48
LRFN4-202ENST00000393952 SEC11CQ9BY50 192 aa18.08■□□□□ 0.48
LRFN4-202ENST00000393952 TRBV20OR9-2A0A075B6H5 130 aa18.07■□□□□ 0.48
LRFN4-202ENST00000393952 RBAKDNA6NC62 111 aa18.07■□□□□ 0.48
LRFN4-202ENST00000393952 OR8A1Q8NGG7 326 aa18.07■□□□□ 0.48
LRFN4-202ENST00000393952 FMC1Q96HJ9 113 aa18.07■□□□□ 0.48
LRFN4-202ENST00000393952 PKD1L1Q8TDX9 2849 aa18.06■□□□□ 0.48
LRFN4-202ENST00000393952 KRBOX1C9JBD0 128 aa18.06■□□□□ 0.48
LRFN4-202ENST00000393952 WIPF1O43516 503 aa18.06■□□□□ 0.48
LRFN4-202ENST00000393952 FAM74A3Q4VXF1 159 aa18.06■□□□□ 0.48
LRFN4-202ENST00000393952 CENPWQ5EE01 88 aa18.06■□□□□ 0.48
LRFN4-202ENST00000393952 GDF5OSQ5U4N7 250 aa18.06■□□□□ 0.48
LRFN4-202ENST00000393952 ASCL2Q99929 193 aa18.06■□□□□ 0.48
LRFN4-202ENST00000393952 PSG8Q9UQ74 426 aa18.06■□□□□ 0.48
LRFN4-202ENST00000393952 TAS2R60P59551 318 aa18.05■□□□□ 0.48
LRFN4-202ENST00000393952 FLI1Q01543 452 aaPredicted RBP18.05■□□□□ 0.48
LRFN4-202ENST00000393952 HIST1H1AQ02539 215 aaPredicted RBP18.05■□□□□ 0.48
LRFN4-202ENST00000393952 ZNF124Q15973 351 aa18.05■□□□□ 0.48
LRFN4-202ENST00000393952 C10orf91Q5T1B1 145 aa18.05■□□□□ 0.48
LRFN4-202ENST00000393952 PRNTQ86SH4 94 aa18.05■□□□□ 0.48
LRFN4-202ENST00000393952 Q86TA4 180 aa18.05■□□□□ 0.48
LRFN4-202ENST00000393952 OR10J6PQ8NGY7 276 aa18.05■□□□□ 0.48
LRFN4-202ENST00000393952 IGF2BP2-AS1Q96M15 143 aa18.05■□□□□ 0.48
LRFN4-202ENST00000393952 AGPAT4-IT1Q9H0P7 198 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms