RNA–Protein interactions for RNA: ENST00000393310.5

LIMS1-203, Transcript of LIM zinc finger domain containing 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIMS1, Length 4,392 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-203ENST00000393310 BCL2P10415 239 aa6.53□□□□□ -1.36
LIMS1-203ENST00000393310 OPRK1P41145 380 aa6.53□□□□□ -1.36
LIMS1-203ENST00000393310 C9orf139Q6ZV77 190 aa6.53□□□□□ -1.36
LIMS1-203ENST00000393310 KAAG1Q9UBP8 84 aa6.53□□□□□ -1.36
LIMS1-203ENST00000393310 KLK11Q9UBX7 282 aa6.53□□□□□ -1.36
LIMS1-203ENST00000393310 MTFP1Q9UDX5 166 aa6.53□□□□□ -1.36
LIMS1-203ENST00000393310 RHODO00212 210 aa6.53□□□□□ -1.36
LIMS1-203ENST00000393310 KLF9Q13886 244 aaPredicted RBP6.53□□□□□ -1.36
LIMS1-203ENST00000393310 SAXO1Q8IYX7 474 aa6.53□□□□□ -1.36
LIMS1-203ENST00000393310 LSM10Q969L4 123 aaKnown RBP6.53□□□□□ -1.36
LIMS1-203ENST00000393310 A0A1B0GX51 115 aa6.53□□□□□ -1.36
LIMS1-203ENST00000393310 ATP5G1P05496 136 aa6.53□□□□□ -1.36
LIMS1-203ENST00000393310 IGLC6P0CF74 106 aa6.53□□□□□ -1.36
LIMS1-203ENST00000393310 C8orf88P0DMB2 117 aa6.53□□□□□ -1.36
LIMS1-203ENST00000393310 ATP5G3P48201 142 aa6.53□□□□□ -1.36
LIMS1-203ENST00000393310 EFNB2P52799 333 aa6.53□□□□□ -1.36
LIMS1-203ENST00000393310 GABARAPL3Q9BY60 117 aa6.53□□□□□ -1.36
LIMS1-203ENST00000393310 SIGLEC8Q9NYZ4 499 aa6.53□□□□□ -1.36
LIMS1-203ENST00000393310 ZNRD1Q9P1U0 126 aa6.53□□□□□ -1.36
LIMS1-203ENST00000393310 TAX1BP3O14907 124 aa6.53□□□□□ -1.36
LIMS1-203ENST00000393310 GP9P14770 177 aa6.53□□□□□ -1.36
LIMS1-203ENST00000393310 C4orf26Q17RF5 130 aa6.53□□□□□ -1.36
LIMS1-203ENST00000393310 PAXXQ9BUH6 204 aa6.53□□□□□ -1.36
LIMS1-203ENST00000393310 TRAV8-6A0A0B4J262 113 aa6.52□□□□□ -1.37
LIMS1-203ENST00000393310 ZNF737O75373 536 aa6.52□□□□□ -1.37
LIMS1-203ENST00000393310 ZNF324O75467 553 aaPredicted RBP6.52□□□□□ -1.37
LIMS1-203ENST00000393310 RND3P61587 244 aa6.52□□□□□ -1.37
LIMS1-203ENST00000393310 CD164Q04900 197 aa6.52□□□□□ -1.37
LIMS1-203ENST00000393310 TDRG1Q3Y452 100 aa6.52□□□□□ -1.37
LIMS1-203ENST00000393310 COA6Q5JTJ3 125 aaKnown RBP6.52□□□□□ -1.37
LIMS1-203ENST00000393310 C15orf53Q8NAA6 179 aa6.52□□□□□ -1.37
LIMS1-203ENST00000393310 PRSS3P2Q8NHM4 247 aa6.52□□□□□ -1.37
LIMS1-203ENST00000393310 MRPS18AQ9NVS2 196 aaKnown RBP6.52□□□□□ -1.37
LIMS1-203ENST00000393310 ACANP16112 2415 aa6.52□□□□□ -1.37
LIMS1-203ENST00000393310 CBLN1P23435 193 aa6.52□□□□□ -1.37
LIMS1-203ENST00000393310 TMEM50BP56557 158 aa6.52□□□□□ -1.37
LIMS1-203ENST00000393310 ZNF56Q15929 161 aa6.52□□□□□ -1.37
LIMS1-203ENST00000393310 MAVSQ7Z434 540 aa6.52□□□□□ -1.37
LIMS1-203ENST00000393310 LINC00305Q7Z4B0 112 aa6.52□□□□□ -1.37
LIMS1-203ENST00000393310 MRPL53Q96EL3 112 aaKnown RBP6.52□□□□□ -1.37
LIMS1-203ENST00000393310 SHISA3A0PJX4 238 aa6.51□□□□□ -1.37
LIMS1-203ENST00000393310 PGPA6NDG6 321 aa6.51□□□□□ -1.37
LIMS1-203ENST00000393310 FOXG1P55316 489 aaPredicted RBP6.51□□□□□ -1.37
LIMS1-203ENST00000393310 ERVK11-1P61568 191 aa6.51□□□□□ -1.37
LIMS1-203ENST00000393310 FOXE3Q13461 319 aa6.51□□□□□ -1.37
LIMS1-203ENST00000393310 JPT2Q9H910 190 aa6.51□□□□□ -1.37
LIMS1-203ENST00000393310 TECRQ9NZ01 308 aaKnown RBP6.51□□□□□ -1.37
LIMS1-203ENST00000393310 TWIST1Q15672 202 aa6.51□□□□□ -1.37
LIMS1-203ENST00000393310 TMEM230Q96A57 120 aa6.51□□□□□ -1.37
LIMS1-203ENST00000393310 USMG5Q96IX5 58 aa6.51□□□□□ -1.37
LIMS1-203ENST00000393310 KIR2DL4Q99706 377 aa6.51□□□□□ -1.37
LIMS1-203ENST00000393310 EPDR1Q9UM22 224 aa6.51□□□□□ -1.37
LIMS1-203ENST00000393310 RFNGQ9Y644 331 aa6.51□□□□□ -1.37
LIMS1-203ENST00000393310 TCRBV5S2A0A599 114 aa6.51□□□□□ -1.37
LIMS1-203ENST00000393310 MT-ATP8P03928 68 aa6.51□□□□□ -1.37
LIMS1-203ENST00000393310 IGHV4-38-2P0DP08 117 aa6.51□□□□□ -1.37
LIMS1-203ENST00000393310 ERHP84090 104 aaKnown RBP6.51□□□□□ -1.37
LIMS1-203ENST00000393310 Q6ZSV7 163 aa6.51□□□□□ -1.37
LIMS1-203ENST00000393310 B9D2Q9BPU9 175 aa6.51□□□□□ -1.37
LIMS1-203ENST00000393310 LSM4Q9Y4Z0 139 aaKnown RBP6.51□□□□□ -1.37
LIMS1-203ENST00000393310 CXCL5P42830 114 aa6.5□□□□□ -1.37
LIMS1-203ENST00000393310 H2BFSP57053 126 aa6.5□□□□□ -1.37
LIMS1-203ENST00000393310 KIAA0040Q15053 153 aa6.5□□□□□ -1.37
LIMS1-203ENST00000393310 CENPWQ5EE01 88 aa6.5□□□□□ -1.37
LIMS1-203ENST00000393310 DMKNQ6E0U4 476 aaPredicted RBP6.5□□□□□ -1.37
LIMS1-203ENST00000393310 FAM216BQ8N7L0 139 aa6.5□□□□□ -1.37
LIMS1-203ENST00000393310 OSR1Q8TAX0 266 aaPredicted RBP6.5□□□□□ -1.37
LIMS1-203ENST00000393310 R4GMQ9 66 aa6.5□□□□□ -1.37
LIMS1-203ENST00000393310 ATOX1O00244 68 aa6.5□□□□□ -1.37
LIMS1-203ENST00000393310 VCYO14598 125 aa6.5□□□□□ -1.37
LIMS1-203ENST00000393310 PITX3O75364 302 aa6.5□□□□□ -1.37
LIMS1-203ENST00000393310 LY6G6CO95867 125 aa6.5□□□□□ -1.37
LIMS1-203ENST00000393310 SRP19P09132 144 aaKnown RBP6.5□□□□□ -1.37
LIMS1-203ENST00000393310 BCDIN3DQ7Z5W3 292 aaKnown RBP6.5□□□□□ -1.37
LIMS1-203ENST00000393310 TRAV9-1A0A075B6T8 112 aa6.5□□□□□ -1.37
LIMS1-203ENST00000393310 WNT9BO14905 357 aa6.5□□□□□ -1.37
LIMS1-203ENST00000393310 SYNJ2BPP57105 145 aa6.5□□□□□ -1.37
LIMS1-203ENST00000393310 IL15RAQ13261 267 aa6.5□□□□□ -1.37
LIMS1-203ENST00000393310 PFN4Q8NHR9 129 aa6.5□□□□□ -1.37
LIMS1-203ENST00000393310 AJUBAQ96IF1 538 aa6.5□□□□□ -1.37
LIMS1-203ENST00000393310 PRSS27Q9BQR3 290 aa6.5□□□□□ -1.37
LIMS1-203ENST00000393310 ZFAND3Q9H8U3 227 aa6.5□□□□□ -1.37
LIMS1-203ENST00000393310 TRAV41A0A0B4J266 112 aa6.5□□□□□ -1.37
LIMS1-203ENST00000393310 SPINK4O60575 86 aa6.5□□□□□ -1.37
LIMS1-203ENST00000393310 IGLL1P15814 213 aa6.5□□□□□ -1.37
LIMS1-203ENST00000393310 LRP4O75096 1905 aa6.49□□□□□ -1.37
LIMS1-203ENST00000393310 FAM90A18PA6NE21 464 aa6.49□□□□□ -1.37
LIMS1-203ENST00000393310 FAM90A16PA6NEW6 464 aa6.49□□□□□ -1.37
LIMS1-203ENST00000393310 FAM90A9PA6NNJ1 464 aa6.49□□□□□ -1.37
LIMS1-203ENST00000393310 FAM90A5PA8MXJ8 464 aa6.49□□□□□ -1.37
LIMS1-203ENST00000393310 CLPSP04118 112 aa6.49□□□□□ -1.37
LIMS1-203ENST00000393310 FAM90A15PP0C7V4 464 aa6.49□□□□□ -1.37
LIMS1-203ENST00000393310 FAM90A14PP0C7W9 464 aa6.49□□□□□ -1.37
LIMS1-203ENST00000393310 TMEM256Q8N2U0 113 aa6.49□□□□□ -1.37
LIMS1-203ENST00000393310 C3orf22Q8N5N4 141 aa6.49□□□□□ -1.37
LIMS1-203ENST00000393310 C1QTNF5Q9BXJ0 243 aa6.49□□□□□ -1.37
LIMS1-203ENST00000393310 FAM236AA0A1B0GUQ0 79 aa6.49□□□□□ -1.37
LIMS1-203ENST00000393310 FAM236BA0A1B0GV22 79 aa6.49□□□□□ -1.37
LIMS1-203ENST00000393310 KBTBD11O94819 623 aa6.49□□□□□ -1.37
LIMS1-203ENST00000393310 AICDAQ9GZX7 198 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 79.4 ms