RNA–Protein interactions for RNA: ENST00000392903.3

SHTN1-204, Transcript of shootin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SHTN1, Length 2,400 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHTN1-204ENST00000392903 SMPXQ9UHP9 88 aa11.88□□□□□ -0.51
SHTN1-204ENST00000392903 HIVEP3Q5T1R4 2406 aa11.88□□□□□ -0.51
SHTN1-204ENST00000392903 WNK2Q9Y3S1 2297 aa11.88□□□□□ -0.51
SHTN1-204ENST00000392903 A0A1W2PPI3 338 aa11.88□□□□□ -0.51
SHTN1-204ENST00000392903 GNG7O60262 68 aa11.88□□□□□ -0.51
SHTN1-204ENST00000392903 ARMS2P0C7Q2 107 aa11.88□□□□□ -0.51
SHTN1-204ENST00000392903 PSG3Q16557 428 aa11.88□□□□□ -0.51
SHTN1-204ENST00000392903 MRGPRG-AS1Q2M3A8 158 aa11.88□□□□□ -0.51
SHTN1-204ENST00000392903 INSIG2Q9Y5U4 225 aa11.88□□□□□ -0.51
SHTN1-204ENST00000392903 PPIAL4CA0A0B4J2A2 164 aa11.87□□□□□ -0.51
SHTN1-204ENST00000392903 RUSC1-AS1Q66K80 236 aa11.87□□□□□ -0.51
SHTN1-204ENST00000392903 PRSS57Q6UWY2 283 aa11.87□□□□□ -0.51
SHTN1-204ENST00000392903 CIARTQ8N365 385 aaPredicted RBP11.87□□□□□ -0.51
SHTN1-204ENST00000392903 TMEM116Q8NCL8 245 aa11.87□□□□□ -0.51
SHTN1-204ENST00000392903 BMI1P35226 326 aa11.87□□□□□ -0.51
SHTN1-204ENST00000392903 IGHV3-21A0A0B4J1V1 117 aa11.86□□□□□ -0.51
SHTN1-204ENST00000392903 TEX48A0A1B0GUV7 120 aa11.86□□□□□ -0.51
SHTN1-204ENST00000392903 C22orf46C9J442 243 aa11.86□□□□□ -0.51
SHTN1-204ENST00000392903 IGLV1-47P01700 117 aa11.86□□□□□ -0.51
SHTN1-204ENST00000392903 FAM106CPP0CH98 169 aa11.86□□□□□ -0.51
SHTN1-204ENST00000392903 HOXB4P17483 251 aaPredicted RBP11.86□□□□□ -0.51
SHTN1-204ENST00000392903 AZU1P20160 251 aa11.86□□□□□ -0.51
SHTN1-204ENST00000392903 IFI27P40305 119 aaPredicted RBP11.86□□□□□ -0.51
SHTN1-204ENST00000392903 UCNP55089 124 aa11.86□□□□□ -0.51
SHTN1-204ENST00000392903 FBXL19-AS1Q494R0 122 aa11.86□□□□□ -0.51
SHTN1-204ENST00000392903 FAM106AQ4KMX7 169 aa11.86□□□□□ -0.51
SHTN1-204ENST00000392903 SAMD5Q5TGI4 173 aa11.86□□□□□ -0.51
SHTN1-204ENST00000392903 SPTAN1Q13813 2472 aaKnown RBP11.86□□□□□ -0.51
SHTN1-204ENST00000392903 TRBV6-1A0A0K0K1D8 114 aa11.86□□□□□ -0.51
SHTN1-204ENST00000392903 BUB1B-PAK6H3BSN5 160 aa11.86□□□□□ -0.51
SHTN1-204ENST00000392903 GOSR1O95249 250 aa11.86□□□□□ -0.51
SHTN1-204ENST00000392903 IGLV2-11P01706 119 aa11.86□□□□□ -0.51
SHTN1-204ENST00000392903 IGFBPL1Q8WX77 278 aa11.86□□□□□ -0.51
SHTN1-204ENST00000392903 SIGMAR1Q99720 223 aa11.86□□□□□ -0.51
SHTN1-204ENST00000392903 OTORQ9NRC9 128 aa11.86□□□□□ -0.51
SHTN1-204ENST00000392903 ONECUT1Q9UBC0 465 aa11.86□□□□□ -0.51
SHTN1-204ENST00000392903 TRAV8-1A0A0A6YYK1 113 aa11.85□□□□□ -0.51
SHTN1-204ENST00000392903 IGHV1-3A0A0C4DH29 117 aa11.85□□□□□ -0.51
SHTN1-204ENST00000392903 RPL24P83731 157 aaKnown RBP11.85□□□□□ -0.51
SHTN1-204ENST00000392903 LOXL1Q08397 574 aaPredicted RBP11.85□□□□□ -0.51
SHTN1-204ENST00000392903 TRGV9Q99603 122 aa11.85□□□□□ -0.51
SHTN1-204ENST00000392903 SMIM13P0DJ93 91 aa11.85□□□□□ -0.51
SHTN1-204ENST00000392903 CACNG7P62955 275 aa11.85□□□□□ -0.51
SHTN1-204ENST00000392903 ZNF493Q6ZR52 646 aa11.85□□□□□ -0.51
SHTN1-204ENST00000392903 SRSF12Q8WXF0 261 aaKnown RBP11.85□□□□□ -0.51
SHTN1-204ENST00000392903 SIGLEC8Q9NYZ4 499 aa11.85□□□□□ -0.51
SHTN1-204ENST00000392903 COL12A1Q99715 3063 aa11.84□□□□□ -0.51
SHTN1-204ENST00000392903 ZNF785A8K8V0 405 aa11.84□□□□□ -0.51
SHTN1-204ENST00000392903 CRYGCP07315 174 aa11.84□□□□□ -0.51
SHTN1-204ENST00000392903 H3BTX0 84 aa11.84□□□□□ -0.51
SHTN1-204ENST00000392903 CT45A10P0DMU9 189 aa11.84□□□□□ -0.51
SHTN1-204ENST00000392903 Q6AWC8 147 aa11.84□□□□□ -0.51
SHTN1-204ENST00000392903 PRNTQ86SH4 94 aa11.84□□□□□ -0.51
SHTN1-204ENST00000392903 PCP2Q8IVA1 136 aa11.84□□□□□ -0.51
SHTN1-204ENST00000392903 U3KQK5 164 aa11.84□□□□□ -0.51
SHTN1-204ENST00000392903 PIFOQ8TCI5 191 aa11.83□□□□□ -0.52
SHTN1-204ENST00000392903 RPEQ96AT9 228 aa11.83□□□□□ -0.52
SHTN1-204ENST00000392903 ZNF414Q96IQ9 312 aa11.83□□□□□ -0.52
SHTN1-204ENST00000392903 GTSF1LQ9H1H1 148 aa11.83□□□□□ -0.52
SHTN1-204ENST00000392903 SIGLEC9Q9Y336 463 aa11.83□□□□□ -0.52
SHTN1-204ENST00000392903 A0A1B0GV72 72 aa11.82□□□□□ -0.52
SHTN1-204ENST00000392903 TMEM238LA0A1B0GVL6 79 aa11.82□□□□□ -0.52
SHTN1-204ENST00000392903 LY6DQ14210 128 aa11.82□□□□□ -0.52
SHTN1-204ENST00000392903 GOLT1AQ6ZVE7 132 aa11.82□□□□□ -0.52
SHTN1-204ENST00000392903 C8orf46Q8TAG6 207 aa11.82□□□□□ -0.52
SHTN1-204ENST00000392903 CLUHP3Q96NS8 147 aa11.82□□□□□ -0.52
SHTN1-204ENST00000392903 FBXL15Q9H469 300 aa11.82□□□□□ -0.52
SHTN1-204ENST00000392903 HBDP02042 147 aa11.82□□□□□ -0.52
SHTN1-204ENST00000392903 RPL27AP46776 148 aaKnown RBP11.82□□□□□ -0.52
SHTN1-204ENST00000392903 NMUP48645 174 aa11.82□□□□□ -0.52
SHTN1-204ENST00000392903 PAX8Q06710 450 aa11.82□□□□□ -0.52
SHTN1-204ENST00000392903 CD300EQ496F6 205 aaPredicted RBP11.82□□□□□ -0.52
SHTN1-204ENST00000392903 Q71RC1 249 aaPredicted RBP11.82□□□□□ -0.52
SHTN1-204ENST00000392903 VGLL1Q99990 258 aa11.82□□□□□ -0.52
SHTN1-204ENST00000392903 TCTAP57738 103 aa11.81□□□□□ -0.52
SHTN1-204ENST00000392903 PPP1R27Q86WC6 154 aa11.81□□□□□ -0.52
SHTN1-204ENST00000392903 TMEM190Q8WZ59 177 aa11.81□□□□□ -0.52
SHTN1-204ENST00000392903 RAB1BQ9H0U4 201 aa11.81□□□□□ -0.52
SHTN1-204ENST00000392903 HIGD1BQ9P298 99 aa11.81□□□□□ -0.52
SHTN1-204ENST00000392903 A0A1W2PRD5 423 aa11.81□□□□□ -0.52
SHTN1-204ENST00000392903 A0A1W2PRF3 423 aa11.81□□□□□ -0.52
SHTN1-204ENST00000392903 A0A1W2PRM7 423 aa11.81□□□□□ -0.52
SHTN1-204ENST00000392903 D6R8Y8 96 aa11.81□□□□□ -0.52
SHTN1-204ENST00000392903 FCGR2BP31994 310 aaPredicted RBP11.81□□□□□ -0.52
SHTN1-204ENST00000392903 SMAGPQ0VAQ4 97 aa11.81□□□□□ -0.52
SHTN1-204ENST00000392903 PVRIGQ6DKI7 326 aa11.81□□□□□ -0.52
SHTN1-204ENST00000392903 FOXI2Q6ZQN5 318 aa11.81□□□□□ -0.52
SHTN1-204ENST00000392903 IFI27L1Q96BM0 104 aa11.81□□□□□ -0.52
SHTN1-204ENST00000392903 TMEM14CQ9P0S9 112 aa11.81□□□□□ -0.52
SHTN1-204ENST00000392903 LOC389332A0A1B0GUA5 103 aa11.8□□□□□ -0.52
SHTN1-204ENST00000392903 CRYGBP07316 175 aa11.8□□□□□ -0.52
SHTN1-204ENST00000392903 PLGLAQ15195 96 aa11.8□□□□□ -0.52
SHTN1-204ENST00000392903 PSMG4Q5JS54 123 aa11.8□□□□□ -0.52
SHTN1-204ENST00000392903 PRELID3AQ96N28 172 aa11.8□□□□□ -0.52
SHTN1-204ENST00000392903 GAGE12HA6NDE8 117 aa11.8□□□□□ -0.52
SHTN1-204ENST00000392903 TMEM75Q8N9X5 138 aa11.8□□□□□ -0.52
SHTN1-204ENST00000392903 ATP6V0BQ99437 205 aa11.8□□□□□ -0.52
SHTN1-204ENST00000392903 MAP1AP78559 2803 aaPredicted RBP11.8□□□□□ -0.52
SHTN1-204ENST00000392903 FXYD2P54710 66 aa11.79□□□□□ -0.52
SHTN1-204ENST00000392903 ORMDL3Q8N138 153 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms