RNA–Protein interactions for RNA: ENST00000392556.8

TRAF3IP2-208, Transcript of TRAF3 interacting protein 2, humanhuman

TSL 1 (best) BASIC

Gene TRAF3IP2, Length 2,188 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2-208ENST00000392556 GCM1Q9NP62 436 aa9.06□□□□□ -0.96
TRAF3IP2-208ENST00000392556 HIGD1BQ9P298 99 aa9.06□□□□□ -0.96
TRAF3IP2-208ENST00000392556 MPC1Q9Y5U8 109 aa9.06□□□□□ -0.96
TRAF3IP2-208ENST00000392556 IQCF6A8MYZ5 107 aa9.06□□□□□ -0.96
TRAF3IP2-208ENST00000392556 RNASE1P07998 156 aaKnown RBP9.06□□□□□ -0.96
TRAF3IP2-208ENST00000392556 MIC13Q5XKP0 118 aa9.06□□□□□ -0.96
TRAF3IP2-208ENST00000392556 ZNF562Q6V9R5 426 aa9.06□□□□□ -0.96
TRAF3IP2-208ENST00000392556 Q6ZUT4 128 aa9.06□□□□□ -0.96
TRAF3IP2-208ENST00000392556 SMIM20Q8N5G0 67 aa9.06□□□□□ -0.96
TRAF3IP2-208ENST00000392556 SSBP3Q9BWW4 388 aaPredicted RBP9.06□□□□□ -0.96
TRAF3IP2-208ENST00000392556 ESM1Q9NQ30 184 aa9.06□□□□□ -0.96
TRAF3IP2-208ENST00000392556 HEYLQ9NQ87 328 aaPredicted RBP9.06□□□□□ -0.96
TRAF3IP2-208ENST00000392556 OR1A1Q9P1Q5 309 aa9.06□□□□□ -0.96
TRAF3IP2-208ENST00000392556 CNIH1O95406 144 aa9.05□□□□□ -0.96
TRAF3IP2-208ENST00000392556 MT-ATP8P03928 68 aa9.05□□□□□ -0.96
TRAF3IP2-208ENST00000392556 GAGE13Q4V321 117 aa9.05□□□□□ -0.96
TRAF3IP2-208ENST00000392556 PSMG4Q5JS54 123 aa9.05□□□□□ -0.96
TRAF3IP2-208ENST00000392556 LINC00596Q86U02 117 aa9.05□□□□□ -0.96
TRAF3IP2-208ENST00000392556 ZBTB34Q8NCN2 500 aa9.05□□□□□ -0.96
TRAF3IP2-208ENST00000392556 C8orf46Q8TAG6 207 aa9.05□□□□□ -0.96
TRAF3IP2-208ENST00000392556 ARPC1AQ92747 370 aa9.05□□□□□ -0.96
TRAF3IP2-208ENST00000392556 VCX2Q9H322 139 aa9.05□□□□□ -0.96
TRAF3IP2-208ENST00000392556 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP9.05□□□□□ -0.96
TRAF3IP2-208ENST00000392556 FBLL1A6NHQ2 334 aaKnown RBP9.05□□□□□ -0.96
TRAF3IP2-208ENST00000392556 VDAC2P45880 294 aaPredicted RBP9.05□□□□□ -0.96
TRAF3IP2-208ENST00000392556 HBBP68871 147 aa9.05□□□□□ -0.96
TRAF3IP2-208ENST00000392556 FOXI1Q12951 378 aa9.05□□□□□ -0.96
TRAF3IP2-208ENST00000392556 Q8TCH9 128 aa9.05□□□□□ -0.96
TRAF3IP2-208ENST00000392556 DDB2Q92466 427 aa9.05□□□□□ -0.96
TRAF3IP2-208ENST00000392556 ZDHHC16Q969W1 377 aa9.05□□□□□ -0.96
TRAF3IP2-208ENST00000392556 C18orf15Q96N68 181 aa9.05□□□□□ -0.96
TRAF3IP2-208ENST00000392556 C20orf78Q9BR46 151 aa9.05□□□□□ -0.96
TRAF3IP2-208ENST00000392556 C1QTNF4Q9BXJ3 329 aa9.05□□□□□ -0.96
TRAF3IP2-208ENST00000392556 hCG_38984A0A1B0GV85 526 aa9.04□□□□□ -0.96
TRAF3IP2-208ENST00000392556 MZT1Q08AG7 82 aa9.04□□□□□ -0.96
TRAF3IP2-208ENST00000392556 ZNF146Q15072 292 aa9.04□□□□□ -0.96
TRAF3IP2-208ENST00000392556 LGALS9BQ3B8N2 356 aa9.04□□□□□ -0.96
TRAF3IP2-208ENST00000392556 KRTAP27-1Q3LI81 207 aa9.04□□□□□ -0.96
TRAF3IP2-208ENST00000392556 LGALS9CQ6DKI2 356 aa9.04□□□□□ -0.96
TRAF3IP2-208ENST00000392556 IL1F10Q8WWZ1 152 aa9.04□□□□□ -0.96
TRAF3IP2-208ENST00000392556 MCRIP2Q9BUT9 160 aaKnown RBP9.04□□□□□ -0.96
TRAF3IP2-208ENST00000392556 LSM4Q9Y4Z0 139 aaKnown RBP9.04□□□□□ -0.96
TRAF3IP2-208ENST00000392556 DNAJC9-AS1A6NH13 148 aa9.03□□□□□ -0.96
TRAF3IP2-208ENST00000392556 BCL3P20749 454 aa9.03□□□□□ -0.96
TRAF3IP2-208ENST00000392556 RPS16P62249 146 aaKnown RBP9.03□□□□□ -0.96
TRAF3IP2-208ENST00000392556 SPRNQ5BIV9 151 aa9.03□□□□□ -0.96
TRAF3IP2-208ENST00000392556 KLF17Q5JT82 389 aaPredicted RBP9.03□□□□□ -0.96
TRAF3IP2-208ENST00000392556 DRAM1Q8N682 238 aa9.03□□□□□ -0.96
TRAF3IP2-208ENST00000392556 SYT8Q8NBV8 401 aa9.03□□□□□ -0.96
TRAF3IP2-208ENST00000392556 PIFOQ8TCI5 191 aa9.03□□□□□ -0.96
TRAF3IP2-208ENST00000392556 TMEM140Q9NV12 185 aa9.03□□□□□ -0.96
TRAF3IP2-208ENST00000392556 NBEAL1Q6ZS30 2694 aa9.03□□□□□ -0.96
TRAF3IP2-208ENST00000392556 IGLL5B9A064 214 aa9.03□□□□□ -0.96
TRAF3IP2-208ENST00000392556 PRSS46E5RG02 174 aa9.03□□□□□ -0.96
TRAF3IP2-208ENST00000392556 CT45A10P0DMU9 189 aa9.03□□□□□ -0.96
TRAF3IP2-208ENST00000392556 G6PCP35575 357 aa9.03□□□□□ -0.96
TRAF3IP2-208ENST00000392556 CAMPP49913 170 aa9.03□□□□□ -0.96
TRAF3IP2-208ENST00000392556 INSL3P51460 131 aa9.03□□□□□ -0.96
TRAF3IP2-208ENST00000392556 TMEM86BQ8N661 226 aa9.03□□□□□ -0.96
TRAF3IP2-208ENST00000392556 ZNF355PQ9NSJ1 428 aa9.03□□□□□ -0.96
TRAF3IP2-208ENST00000392556 XGP55808 180 aa9.02□□□□□ -0.97
TRAF3IP2-208ENST00000392556 ERVK11-1P61568 191 aa9.02□□□□□ -0.97
TRAF3IP2-208ENST00000392556 HIGD1CA8MV81 97 aa9.02□□□□□ -0.97
TRAF3IP2-208ENST00000392556 C3orf80F5H4A9 247 aa9.02□□□□□ -0.97
TRAF3IP2-208ENST00000392556 ENSAO43768 121 aaKnown RBP9.02□□□□□ -0.97
TRAF3IP2-208ENST00000392556 Q6AWC8 147 aa9.02□□□□□ -0.97
TRAF3IP2-208ENST00000392556 ZFAND6Q6FIF0 208 aa9.02□□□□□ -0.97
TRAF3IP2-208ENST00000392556 PIGCQ92535 297 aa9.02□□□□□ -0.97
TRAF3IP2-208ENST00000392556 SVEP1Q4LDE5 3571 aa9.01□□□□□ -0.97
TRAF3IP2-208ENST00000392556 DYSFO75923 2080 aa9.01□□□□□ -0.97
TRAF3IP2-208ENST00000392556 GAGE12JA6NER3 117 aa9.01□□□□□ -0.97
TRAF3IP2-208ENST00000392556 FAM90A9PA6NNJ1 464 aa9.01□□□□□ -0.97
TRAF3IP2-208ENST00000392556 A8MWL6 223 aa9.01□□□□□ -0.97
TRAF3IP2-208ENST00000392556 MGST3O14880 152 aa9.01□□□□□ -0.97
TRAF3IP2-208ENST00000392556 GAGE7O76087 117 aa9.01□□□□□ -0.97
TRAF3IP2-208ENST00000392556 APOMO95445 188 aa9.01□□□□□ -0.97
TRAF3IP2-208ENST00000392556 NCR2O95944 276 aa9.01□□□□□ -0.97
TRAF3IP2-208ENST00000392556 NHLRC4P0CG21 123 aaPredicted RBP9.01□□□□□ -0.97
TRAF3IP2-208ENST00000392556 GAGE12FP0CL80 117 aa9.01□□□□□ -0.97
TRAF3IP2-208ENST00000392556 GAGE12GP0CL81 117 aa9.01□□□□□ -0.97
TRAF3IP2-208ENST00000392556 GAGE12IP0CL82 117 aa9.01□□□□□ -0.97
TRAF3IP2-208ENST00000392556 CSN1S1P47710 185 aa9.01□□□□□ -0.97
TRAF3IP2-208ENST00000392556 FOXA3P55318 350 aaPredicted RBP9.01□□□□□ -0.97
TRAF3IP2-208ENST00000392556 GAGE4Q13068 117 aa9.01□□□□□ -0.97
TRAF3IP2-208ENST00000392556 EIF4EBP1Q13541 118 aaPredicted RBP9.01□□□□□ -0.97
TRAF3IP2-208ENST00000392556 PSG5Q15238 335 aa9.01□□□□□ -0.97
TRAF3IP2-208ENST00000392556 BCL6BQ8N143 479 aaPredicted RBP9.01□□□□□ -0.97
TRAF3IP2-208ENST00000392556 A0A087WX48 190 aa9□□□□□ -0.97
TRAF3IP2-208ENST00000392556 FXYD2P54710 66 aa9□□□□□ -0.97
TRAF3IP2-208ENST00000392556 MOGAT3Q86VF5 341 aa9□□□□□ -0.97
TRAF3IP2-208ENST00000392556 PIP4P2Q8N4L2 257 aa9□□□□□ -0.97
TRAF3IP2-208ENST00000392556 OSR1Q8TAX0 266 aaPredicted RBP9□□□□□ -0.97
TRAF3IP2-208ENST00000392556 POLDIP2Q9Y2S7 368 aa9□□□□□ -0.97
TRAF3IP2-208ENST00000392556 GGTLC3B5MD39 225 aa9□□□□□ -0.97
TRAF3IP2-208ENST00000392556 H3BMG7 143 aa9□□□□□ -0.97
TRAF3IP2-208ENST00000392556 PRR20EP86478 221 aa9□□□□□ -0.97
TRAF3IP2-208ENST00000392556 PRR20CP86479 221 aa9□□□□□ -0.97
TRAF3IP2-208ENST00000392556 PRR20DP86480 221 aa9□□□□□ -0.97
TRAF3IP2-208ENST00000392556 PRR20BP86481 221 aa9□□□□□ -0.97
TRAF3IP2-208ENST00000392556 PRR20AP86496 221 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms