RNA–Protein interactions for RNA: ENST00000389138.7

ERCC4-202, Transcript of ERCC excision repair 4, endonuclease catalytic subunit, humanhuman

TSL 2

Gene ERCC4, Length 2,106 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4-202ENST00000389138 CST11Q9H112 138 aa4.25□□□□□ -1.73
ERCC4-202ENST00000389138 PARP11Q9NR21 331 aa4.25□□□□□ -1.73
ERCC4-202ENST00000389138 NOP16Q9Y3C1 178 aaKnown RBP4.25□□□□□ -1.73
ERCC4-202ENST00000389138 AMMECR1Q9Y4X0 333 aaPredicted RBP4.25□□□□□ -1.73
ERCC4-202ENST00000389138 HRNRQ86YZ3 2850 aaPredicted RBP4.25□□□□□ -1.73
ERCC4-202ENST00000389138 A0A1W2PS18 150 aa4.25□□□□□ -1.73
ERCC4-202ENST00000389138 TMEM14DPA8MWL7 114 aa4.25□□□□□ -1.73
ERCC4-202ENST00000389138 F5H5P2 479 aa4.25□□□□□ -1.73
ERCC4-202ENST00000389138 PRSS2P07478 247 aa4.25□□□□□ -1.73
ERCC4-202ENST00000389138 IGHV3-43DP0DP04 118 aa4.25□□□□□ -1.73
ERCC4-202ENST00000389138 NTF3P20783 257 aa4.25□□□□□ -1.73
ERCC4-202ENST00000389138 RAB5CP51148 216 aa4.25□□□□□ -1.73
ERCC4-202ENST00000389138 MP68P56378 58 aa4.25□□□□□ -1.73
ERCC4-202ENST00000389138 SRPXP78539 464 aa4.25□□□□□ -1.73
ERCC4-202ENST00000389138 LOXL1Q08397 574 aaPredicted RBP4.25□□□□□ -1.73
ERCC4-202ENST00000389138 ZNF239Q16600 458 aaKnown RBP4.25□□□□□ -1.73
ERCC4-202ENST00000389138 ALKAL2Q6UX46 152 aa4.25□□□□□ -1.73
ERCC4-202ENST00000389138 ZNF767PQ75MW2 155 aa4.25□□□□□ -1.73
ERCC4-202ENST00000389138 ZNF664Q8N3J9 261 aa4.25□□□□□ -1.73
ERCC4-202ENST00000389138 DDB2Q92466 427 aa4.25□□□□□ -1.73
ERCC4-202ENST00000389138 SPTSSAQ969W0 71 aa4.25□□□□□ -1.73
ERCC4-202ENST00000389138 S100A13Q99584 98 aa4.25□□□□□ -1.73
ERCC4-202ENST00000389138 SMR3AQ99954 134 aa4.25□□□□□ -1.73
ERCC4-202ENST00000389138 LINC00527Q9UJ94 153 aa4.25□□□□□ -1.73
ERCC4-202ENST00000389138 PRR14LQ5THK1 2151 aa4.25□□□□□ -1.73
ERCC4-202ENST00000389138 SNRPGP15A8MWD9 76 aa4.24□□□□□ -1.73
ERCC4-202ENST00000389138 K7EPK0 472 aa4.24□□□□□ -1.73
ERCC4-202ENST00000389138 IL5P05113 134 aa4.24□□□□□ -1.73
ERCC4-202ENST00000389138 SMIM17P0DL12 118 aa4.24□□□□□ -1.73
ERCC4-202ENST00000389138 LINC00694P0DN24 101 aa4.24□□□□□ -1.73
ERCC4-202ENST00000389138 HIST1H1BP16401 226 aaKnown RBP4.24□□□□□ -1.73
ERCC4-202ENST00000389138 HIST1H1DP16402 221 aaKnown RBP4.24□□□□□ -1.73
ERCC4-202ENST00000389138 NFYAP23511 347 aaPredicted RBP4.24□□□□□ -1.73
ERCC4-202ENST00000389138 FKBP2P26885 142 aaKnown RBP4.24□□□□□ -1.73
ERCC4-202ENST00000389138 PSMB3P49720 205 aa4.24□□□□□ -1.73
ERCC4-202ENST00000389138 PLGLB1Q02325 96 aa4.24□□□□□ -1.73
ERCC4-202ENST00000389138 C6orf201Q7Z4U5 140 aa4.24□□□□□ -1.73
ERCC4-202ENST00000389138 LHFPL1Q86WI0 220 aa4.24□□□□□ -1.73
ERCC4-202ENST00000389138 VN1R17PQ8TDU5 208 aa4.24□□□□□ -1.73
ERCC4-202ENST00000389138 OR5AC2Q9NZP5 309 aa4.24□□□□□ -1.73
ERCC4-202ENST00000389138 CSAG2Q9Y5P2 127 aa4.24□□□□□ -1.73
ERCC4-202ENST00000389138 IGHV4-4A0A075B6R2 117 aa4.24□□□□□ -1.73
ERCC4-202ENST00000389138 LEUTXA8MZ59 168 aa4.24□□□□□ -1.73
ERCC4-202ENST00000389138 RBFOX2O43251 390 aaKnown RBP eCLIP4.24□□□□□ -1.73
ERCC4-202ENST00000389138 TOMM40O96008 361 aa4.24□□□□□ -1.73
ERCC4-202ENST00000389138 INAFM2P0DMQ5 153 aa4.24□□□□□ -1.73
ERCC4-202ENST00000389138 LINC00313P59037 77 aa4.24□□□□□ -1.73
ERCC4-202ENST00000389138 GUCA2BQ16661 112 aa4.24□□□□□ -1.73
ERCC4-202ENST00000389138 PABPC1L2AQ5JQF8 200 aa4.24□□□□□ -1.73
ERCC4-202ENST00000389138 FAM27BQ5VT28 67 aa4.24□□□□□ -1.73
ERCC4-202ENST00000389138 OR2G3Q8NGZ4 309 aa4.24□□□□□ -1.73
ERCC4-202ENST00000389138 PRSS3P2Q8NHM4 247 aa4.24□□□□□ -1.73
ERCC4-202ENST00000389138 TERB2Q8NHR7 220 aa4.24□□□□□ -1.73
ERCC4-202ENST00000389138 MPLKIPQ8TAP9 179 aa4.24□□□□□ -1.73
ERCC4-202ENST00000389138 PHYHIPLQ96FC7 376 aa4.24□□□□□ -1.73
ERCC4-202ENST00000389138 TTTY12Q9BZ98 90 aa4.24□□□□□ -1.73
ERCC4-202ENST00000389138 OR2J1Q9GZK6 312 aa4.24□□□□□ -1.73
ERCC4-202ENST00000389138 BOKQ9UMX3 212 aaPredicted RBP4.24□□□□□ -1.73
ERCC4-202ENST00000389138 ZNF706Q9Y5V0 76 aaPredicted RBP4.24□□□□□ -1.73
ERCC4-202ENST00000389138 CHD3Q12873 2000 aaKnown RBP4.23□□□□□ -1.73
ERCC4-202ENST00000389138 ABCA4P78363 2273 aa4.23□□□□□ -1.73
ERCC4-202ENST00000389138 TRAV14DV4A0A0A6YYC5 116 aa4.23□□□□□ -1.73
ERCC4-202ENST00000389138 MCRIP1C9JLW8 97 aa4.23□□□□□ -1.73
ERCC4-202ENST00000389138 M0R381 172 aa4.23□□□□□ -1.73
ERCC4-202ENST00000389138 OVOL1O14753 267 aa4.23□□□□□ -1.73
ERCC4-202ENST00000389138 MRPL33O75394 65 aaKnown RBP4.23□□□□□ -1.73
ERCC4-202ENST00000389138 FSTL3O95633 263 aa4.23□□□□□ -1.73
ERCC4-202ENST00000389138 SLPIP03973 132 aa4.23□□□□□ -1.73
ERCC4-202ENST00000389138 CRYGSP22914 178 aa4.23□□□□□ -1.73
ERCC4-202ENST00000389138 IL3RAP26951 378 aa4.23□□□□□ -1.73
ERCC4-202ENST00000389138 OPRM1P35372 400 aa4.23□□□□□ -1.73
ERCC4-202ENST00000389138 CA7P43166 264 aa4.23□□□□□ -1.73
ERCC4-202ENST00000389138 SSBP1Q04837 148 aaKnown RBP4.23□□□□□ -1.73
ERCC4-202ENST00000389138 PIGYQ3MUY2 71 aa4.23□□□□□ -1.73
ERCC4-202ENST00000389138 TMUB2Q71RG4 321 aa4.23□□□□□ -1.73
ERCC4-202ENST00000389138 OR5H2Q8NGV7 314 aa4.23□□□□□ -1.73
ERCC4-202ENST00000389138 SLC25A21Q9BQT8 299 aaPredicted RBP4.23□□□□□ -1.73
ERCC4-202ENST00000389138 TMEM70Q9BUB7 260 aa4.23□□□□□ -1.73
ERCC4-202ENST00000389138 IFI27L2Q9H2X8 130 aa4.23□□□□□ -1.73
ERCC4-202ENST00000389138 PARLQ9H300 379 aa4.23□□□□□ -1.73
ERCC4-202ENST00000389138 MCTS1Q9ULC4 181 aaKnown RBP4.23□□□□□ -1.73
ERCC4-202ENST00000389138 V9GYS6 101 aa4.23□□□□□ -1.73
ERCC4-202ENST00000389138 ARHGAP21Q5T5U3 1957 aa4.23□□□□□ -1.73
ERCC4-202ENST00000389138 MED12LQ86YW9 2145 aa4.23□□□□□ -1.73
ERCC4-202ENST00000389138 TRAV9-2A0A087WT02 112 aa4.22□□□□□ -1.73
ERCC4-202ENST00000389138 IGHV3-64DA0A0J9YX35 117 aa4.22□□□□□ -1.73
ERCC4-202ENST00000389138 MPTX1A8MV57 137 aa4.22□□□□□ -1.73
ERCC4-202ENST00000389138 TMEM250H0YL14 139 aa4.22□□□□□ -1.73
ERCC4-202ENST00000389138 I3L521 148 aa4.22□□□□□ -1.73
ERCC4-202ENST00000389138 J3QQQ9 107 aa4.22□□□□□ -1.73
ERCC4-202ENST00000389138 M0R1X1 148 aa4.22□□□□□ -1.73
ERCC4-202ENST00000389138 BCL2L11O43521 198 aa4.22□□□□□ -1.73
ERCC4-202ENST00000389138 IFNA7P01567 189 aa4.22□□□□□ -1.73
ERCC4-202ENST00000389138 IGLV2-8P01709 118 aa4.22□□□□□ -1.73
ERCC4-202ENST00000389138 SP6Q3SY56 376 aa4.22□□□□□ -1.73
ERCC4-202ENST00000389138 FAM74A1Q5RGS3 127 aa4.22□□□□□ -1.73
ERCC4-202ENST00000389138 PAXXQ9BUH6 204 aa4.22□□□□□ -1.73
ERCC4-202ENST00000389138 C11orf68Q9H3H3 251 aaKnown RBP4.22□□□□□ -1.73
ERCC4-202ENST00000389138 TRAV38-1A0A0B4J264 116 aa4.22□□□□□ -1.73
ERCC4-202ENST00000389138 IGKV1-12A0A0C4DH73 117 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms