RNA–Protein interactions for RNA: ENST00000384344.1

RNU6-39P-201, Transcript of RNA, U6 small nuclear 39, pseudogene, humanhuman

BASIC

Gene RNU6-39P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-39P-201ENST00000384344 CD2P06729 351 aa0.31□□□□□ -2.36
RNU6-39P-201ENST00000384344 RNASE4P34096 147 aaKnown RBP0.31□□□□□ -2.36
RNU6-39P-201ENST00000384344 ASIPP42127 132 aa0.31□□□□□ -2.36
RNU6-39P-201ENST00000384344 DSCR4P56555 118 aaPredicted RBP0.31□□□□□ -2.36
RNU6-39P-201ENST00000384344 ITGB3BPQ13352 177 aaPredicted RBP0.31□□□□□ -2.36
RNU6-39P-201ENST00000384344 RRN3P1Q2M238 152 aa0.31□□□□□ -2.36
RNU6-39P-201ENST00000384344 KRTAP19-6Q3LI70 58 aa0.31□□□□□ -2.36
RNU6-39P-201ENST00000384344 ZNF833PQ6ZTB9 187 aa0.31□□□□□ -2.36
RNU6-39P-201ENST00000384344 EXOC3-AS1Q8N2X6 119 aa0.31□□□□□ -2.36
RNU6-39P-201ENST00000384344 OR10K1Q8NGX5 313 aa0.31□□□□□ -2.36
RNU6-39P-201ENST00000384344 IMUPQ9GZP8 106 aa0.31□□□□□ -2.36
RNU6-39P-201ENST00000384344 PSTPIP2Q9H939 334 aa0.31□□□□□ -2.36
RNU6-39P-201ENST00000384344 NMNAT1Q9HAN9 279 aaPredicted RBP0.31□□□□□ -2.36
RNU6-39P-201ENST00000384344 PARVBQ9HBI1 364 aa0.31□□□□□ -2.36
RNU6-39P-201ENST00000384344 CLASP1Q7Z460 1538 aa0.31□□□□□ -2.36
RNU6-39P-201ENST00000384344 DOPEY2Q9Y3R5 2298 aa0.31□□□□□ -2.36
RNU6-39P-201ENST00000384344 HECW1Q76N89 1606 aa0.31□□□□□ -2.36
RNU6-39P-201ENST00000384344 ZFC3H1O60293 1989 aaKnown RBP0.3□□□□□ -2.36
RNU6-39P-201ENST00000384344 E7EUB6 86 aa0.3□□□□□ -2.36
RNU6-39P-201ENST00000384344 ERC2-IT1O76042 136 aa0.3□□□□□ -2.36
RNU6-39P-201ENST00000384344 COX7CP15954 63 aa0.3□□□□□ -2.36
RNU6-39P-201ENST00000384344 PIGPP57054 158 aa0.3□□□□□ -2.36
RNU6-39P-201ENST00000384344 DEFA3P59666 94 aa0.3□□□□□ -2.36
RNU6-39P-201ENST00000384344 MYL6P60660 151 aa0.3□□□□□ -2.36
RNU6-39P-201ENST00000384344 RANP62826 216 aaKnown RBP0.3□□□□□ -2.36
RNU6-39P-201ENST00000384344 RGS21Q2M5E4 152 aa0.3□□□□□ -2.36
RNU6-39P-201ENST00000384344 OTUD6BQ8N6M0 293 aa0.3□□□□□ -2.36
RNU6-39P-201ENST00000384344 LYSMD1Q96S90 227 aa0.3□□□□□ -2.36
RNU6-39P-201ENST00000384344 SMR3AQ99954 134 aa0.3□□□□□ -2.36
RNU6-39P-201ENST00000384344 PBOV1Q9GZY1 135 aa0.3□□□□□ -2.36
RNU6-39P-201ENST00000384344 TMEM126AQ9H061 195 aa0.3□□□□□ -2.36
RNU6-39P-201ENST00000384344 PARVGQ9HBI0 331 aa0.3□□□□□ -2.36
RNU6-39P-201ENST00000384344 PLAC8Q9NZF1 115 aa0.3□□□□□ -2.36
RNU6-39P-201ENST00000384344 NWD1Q149M9 1564 aa0.3□□□□□ -2.36
RNU6-39P-201ENST00000384344 LRP1Q07954 4544 aaKnown RBP0.3□□□□□ -2.36
RNU6-39P-201ENST00000384344 PHLPP1O60346 1717 aa0.3□□□□□ -2.36
RNU6-39P-201ENST00000384344 XIRP1Q702N8 1843 aaKnown RBP0.29□□□□□ -2.36
RNU6-39P-201ENST00000384344 DLC1Q96QB1 1528 aa0.29□□□□□ -2.36
RNU6-39P-201ENST00000384344 MED13LQ71F56 2210 aa0.29□□□□□ -2.36
RNU6-39P-201ENST00000384344 TRBV19A0A075B6N1 114 aa0.29□□□□□ -2.36
RNU6-39P-201ENST00000384344 C17orf112F2Z3M2 114 aa0.29□□□□□ -2.36
RNU6-39P-201ENST00000384344 M0R378 163 aa0.29□□□□□ -2.36
RNU6-39P-201ENST00000384344 GGCTO75223 188 aaKnown RBP0.29□□□□□ -2.36
RNU6-39P-201ENST00000384344 OR7C1O76099 320 aaPredicted RBP0.29□□□□□ -2.36
RNU6-39P-201ENST00000384344 HAND1O96004 215 aa0.29□□□□□ -2.36
RNU6-39P-201ENST00000384344 PRH1P02810 166 aa0.29□□□□□ -2.36
RNU6-39P-201ENST00000384344 SRIP30626 198 aa0.29□□□□□ -2.36
RNU6-39P-201ENST00000384344 HOXA6P31267 233 aa0.29□□□□□ -2.36
RNU6-39P-201ENST00000384344 CDK6Q00534 326 aa0.29□□□□□ -2.36
RNU6-39P-201ENST00000384344 EIF5AL1Q6IS14 154 aaKnown RBP0.29□□□□□ -2.36
RNU6-39P-201ENST00000384344 OR8J2Q8NGG1 315 aa0.29□□□□□ -2.36
RNU6-39P-201ENST00000384344 STAG3L4Q8TBR4 150 aa0.29□□□□□ -2.36
RNU6-39P-201ENST00000384344 PARD6GQ9BYG4 376 aaPredicted RBP0.29□□□□□ -2.36
RNU6-39P-201ENST00000384344 RIMS1Q86UR5 1692 aaKnown RBP0.29□□□□□ -2.36
RNU6-39P-201ENST00000384344 ZNF106Q9H2Y7 1883 aaKnown RBP0.29□□□□□ -2.36
RNU6-39P-201ENST00000384344 SPTBN1Q01082 2364 aaKnown RBP0.28□□□□□ -2.36
RNU6-39P-201ENST00000384344 KIAA1549Q9HCM3 1950 aa0.28□□□□□ -2.36
RNU6-39P-201ENST00000384344 IFNA7P01567 189 aa0.28□□□□□ -2.36
RNU6-39P-201ENST00000384344 TCRBP04435 133 aa0.28□□□□□ -2.36
RNU6-39P-201ENST00000384344 OR10J4P0C629 311 aa0.28□□□□□ -2.36
RNU6-39P-201ENST00000384344 CXCL8P10145 99 aa0.28□□□□□ -2.36
RNU6-39P-201ENST00000384344 KDELR1P24390 212 aa0.28□□□□□ -2.36
RNU6-39P-201ENST00000384344 SPINK7P58062 85 aa0.28□□□□□ -2.36
RNU6-39P-201ENST00000384344 FXYD6P3P58550 94 aa0.28□□□□□ -2.36
RNU6-39P-201ENST00000384344 ROMO1P60602 79 aa0.28□□□□□ -2.36
RNU6-39P-201ENST00000384344 LSM6P62312 80 aaKnown RBP0.28□□□□□ -2.36
RNU6-39P-201ENST00000384344 UBE2BP63146 152 aa0.28□□□□□ -2.36
RNU6-39P-201ENST00000384344 SPATA45Q537H7 98 aa0.28□□□□□ -2.36
RNU6-39P-201ENST00000384344 Q6ZS92 163 aa0.28□□□□□ -2.36
RNU6-39P-201ENST00000384344 MUCL1Q96DR8 90 aa0.28□□□□□ -2.36
RNU6-39P-201ENST00000384344 SIGMAR1Q99720 223 aa0.28□□□□□ -2.36
RNU6-39P-201ENST00000384344 HSPB8Q9UJY1 196 aa0.28□□□□□ -2.36
RNU6-39P-201ENST00000384344 OR52A1Q9UKL2 312 aa0.28□□□□□ -2.36
RNU6-39P-201ENST00000384344 RNF11Q9Y3C5 154 aa0.28□□□□□ -2.36
RNU6-39P-201ENST00000384344 HECTD4Q9Y4D8 3996 aa0.28□□□□□ -2.36
RNU6-39P-201ENST00000384344 DYNC1H1Q14204 4646 aaKnown RBP0.28□□□□□ -2.36
RNU6-39P-201ENST00000384344 ASCC3Q8N3C0 2202 aaKnown RBP0.28□□□□□ -2.37
RNU6-39P-201ENST00000384344 FAM159BA6NKW6 160 aa0.27□□□□□ -2.37
RNU6-39P-201ENST00000384344 M0R233 179 aa0.27□□□□□ -2.37
RNU6-39P-201ENST00000384344 CST8O60676 142 aa0.27□□□□□ -2.37
RNU6-39P-201ENST00000384344 MT4P47944 62 aa0.27□□□□□ -2.37
RNU6-39P-201ENST00000384344 LIN52Q52LA3 116 aa0.27□□□□□ -2.37
RNU6-39P-201ENST00000384344 OR10AG1Q8NH19 301 aa0.27□□□□□ -2.37
RNU6-39P-201ENST00000384344 TEX37Q96LM6 180 aa0.27□□□□□ -2.37
RNU6-39P-201ENST00000384344 TCEAL2Q9H3H9 227 aaPredicted RBP0.27□□□□□ -2.37
RNU6-39P-201ENST00000384344 SLC22A13Q9Y226 551 aa0.27□□□□□ -2.37
RNU6-39P-201ENST00000384344 PKHD1P08F94 4074 aa0.27□□□□□ -2.37
RNU6-39P-201ENST00000384344 ALMS1Q8TCU4 4167 aa0.27□□□□□ -2.37
RNU6-39P-201ENST00000384344 EFCAB6Q5THR3 1501 aa0.27□□□□□ -2.37
RNU6-39P-201ENST00000384344 TET3O43151 1660 aa0.27□□□□□ -2.37
RNU6-39P-201ENST00000384344 ARHGEF28Q8N1W1 1705 aaKnown RBP0.27□□□□□ -2.37
RNU6-39P-201ENST00000384344 DNAH7Q8WXX0 4024 aa0.27□□□□□ -2.37
RNU6-39P-201ENST00000384344 PKD1P98161 4303 aa0.27□□□□□ -2.37
RNU6-39P-201ENST00000384344 SYNE1Q8NF91 8797 aaKnown RBP0.26□□□□□ -2.37
RNU6-39P-201ENST00000384344 TRAV4A0A0B4J268 109 aa0.26□□□□□ -2.37
RNU6-39P-201ENST00000384344 A0A0D9SG42 100 aa0.26□□□□□ -2.37
RNU6-39P-201ENST00000384344 TAX1BP3O14907 124 aa0.26□□□□□ -2.37
RNU6-39P-201ENST00000384344 CDKN2CP42773 168 aa0.26□□□□□ -2.37
RNU6-39P-201ENST00000384344 CIRBPQ14011 172 aaKnown RBP0.26□□□□□ -2.37
RNU6-39P-201ENST00000384344 ATOH7Q8N100 152 aa0.26□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms