RNA–Protein interactions for RNA: ENST00000381272.5

SMC6-202, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 5

Gene SMC6, Length 1,803 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-202ENST00000381272 P01737 135 aa2.9□□□□□ -1.95
SMC6-202ENST00000381272 TCRAP04437 139 aa2.9□□□□□ -1.95
SMC6-202ENST00000381272 PPIAL4GP0DN37 164 aa2.9□□□□□ -1.95
SMC6-202ENST00000381272 CTRLP40313 264 aa2.9□□□□□ -1.95
SMC6-202ENST00000381272 FOXA3P55318 350 aaPredicted RBP2.9□□□□□ -1.95
SMC6-202ENST00000381272 KLF5Q13887 457 aaPredicted RBP2.9□□□□□ -1.95
SMC6-202ENST00000381272 MMDQ15546 238 aa2.9□□□□□ -1.95
SMC6-202ENST00000381272 KLF17Q5JT82 389 aaPredicted RBP2.9□□□□□ -1.95
SMC6-202ENST00000381272 LDLRAD2Q5SZI1 272 aa2.9□□□□□ -1.95
SMC6-202ENST00000381272 PVRIGQ6DKI7 326 aa2.9□□□□□ -1.95
SMC6-202ENST00000381272 SSX8Q7RTT4 187 aa2.9□□□□□ -1.95
SMC6-202ENST00000381272 SPATA12Q7Z6I5 190 aa2.9□□□□□ -1.95
SMC6-202ENST00000381272 PRNTQ86SH4 94 aa2.9□□□□□ -1.95
SMC6-202ENST00000381272 PPP1R27Q86WC6 154 aa2.9□□□□□ -1.95
SMC6-202ENST00000381272 STXBP6Q8NFX7 210 aa2.9□□□□□ -1.95
SMC6-202ENST00000381272 OR4B1Q8NGF8 309 aa2.9□□□□□ -1.95
SMC6-202ENST00000381272 C8orf46Q8TAG6 207 aa2.9□□□□□ -1.95
SMC6-202ENST00000381272 C17orf77Q96MU5 243 aa2.9□□□□□ -1.95
SMC6-202ENST00000381272 GPR82Q96P67 336 aa2.9□□□□□ -1.95
SMC6-202ENST00000381272 CHRDL1Q9BU40 450 aa2.9□□□□□ -1.95
SMC6-202ENST00000381272 NGBQ9NPG2 151 aa2.9□□□□□ -1.95
SMC6-202ENST00000381272 CLEC5AQ9NY25 188 aa2.9□□□□□ -1.95
SMC6-202ENST00000381272 ONECUT1Q9UBC0 465 aa2.9□□□□□ -1.95
SMC6-202ENST00000381272 HIGD1AQ9Y241 93 aa2.9□□□□□ -1.95
SMC6-202ENST00000381272 KLF12Q9Y4X4 402 aa2.9□□□□□ -1.95
SMC6-202ENST00000381272 HILPDAQ9Y5L2 63 aa2.9□□□□□ -1.95
SMC6-202ENST00000381272 F11RQ9Y624 299 aaKnown RBP2.9□□□□□ -1.95
SMC6-202ENST00000381272 TTC28Q96AY4 2481 aa2.9□□□□□ -1.95
SMC6-202ENST00000381272 POLEQ07864 2286 aa2.89□□□□□ -1.95
SMC6-202ENST00000381272 CSMD1Q96PZ7 3565 aa2.89□□□□□ -1.95
SMC6-202ENST00000381272 A0A1B0GXF2 115 aa2.89□□□□□ -1.95
SMC6-202ENST00000381272 C19orf71A6NCJ1 209 aa2.89□□□□□ -1.95
SMC6-202ENST00000381272 A8MWL6 223 aa2.89□□□□□ -1.95
SMC6-202ENST00000381272 I3L2K1 104 aa2.89□□□□□ -1.95
SMC6-202ENST00000381272 LTAP01374 205 aa2.89□□□□□ -1.95
SMC6-202ENST00000381272 IGLC1P0CG04 106 aa2.89□□□□□ -1.95
SMC6-202ENST00000381272 IGLC2P0DOY2 106 aa2.89□□□□□ -1.95
SMC6-202ENST00000381272 IGLC3P0DOY3 106 aa2.89□□□□□ -1.95
SMC6-202ENST00000381272 ZNF138P52744 262 aa2.89□□□□□ -1.95
SMC6-202ENST00000381272 ARF6P62330 175 aa2.89□□□□□ -1.95
SMC6-202ENST00000381272 HBBP68871 147 aa2.89□□□□□ -1.95
SMC6-202ENST00000381272 RPL36AP83881 106 aaKnown RBP2.89□□□□□ -1.95
SMC6-202ENST00000381272 KLRD1Q13241 179 aa2.89□□□□□ -1.95
SMC6-202ENST00000381272 Q56UQ5 140 aa2.89□□□□□ -1.95
SMC6-202ENST00000381272 RASL11AQ6T310 242 aa2.89□□□□□ -1.95
SMC6-202ENST00000381272 Q6ZN92 141 aa2.89□□□□□ -1.95
SMC6-202ENST00000381272 LINC00173Q6ZV60 143 aa2.89□□□□□ -1.95
SMC6-202ENST00000381272 GOLT1AQ6ZVE7 132 aa2.89□□□□□ -1.95
SMC6-202ENST00000381272 C5orf17Q8NAS9 161 aa2.89□□□□□ -1.95
SMC6-202ENST00000381272 SRSF12Q8WXF0 261 aaKnown RBP2.89□□□□□ -1.95
SMC6-202ENST00000381272 RPEQ96AT9 228 aa2.89□□□□□ -1.95
SMC6-202ENST00000381272 FMC1Q96HJ9 113 aa2.89□□□□□ -1.95
SMC6-202ENST00000381272 TXN2Q99757 166 aa2.89□□□□□ -1.95
SMC6-202ENST00000381272 RASL11BQ9BPW5 248 aa2.89□□□□□ -1.95
SMC6-202ENST00000381272 TMEM208Q9BTX3 173 aa2.89□□□□□ -1.95
SMC6-202ENST00000381272 SLC25A39Q9BZJ4 359 aaPredicted RBP2.89□□□□□ -1.95
SMC6-202ENST00000381272 LPAR2Q9HBW0 351 aa2.89□□□□□ -1.95
SMC6-202ENST00000381272 MRPL27Q9P0M9 148 aaKnown RBP2.89□□□□□ -1.95
SMC6-202ENST00000381272 GAGE10A6NGK3 116 aa2.89□□□□□ -1.95
SMC6-202ENST00000381272 C2orf70A6NJV1 201 aa2.89□□□□□ -1.95
SMC6-202ENST00000381272 LY6LH3BQJ8 138 aa2.89□□□□□ -1.95
SMC6-202ENST00000381272 TIMM23O14925 209 aa2.89□□□□□ -1.95
SMC6-202ENST00000381272 DLEU1O43261 78 aa2.89□□□□□ -1.95
SMC6-202ENST00000381272 OR2J3O76001 311 aa2.89□□□□□ -1.95
SMC6-202ENST00000381272 IGKV1-17P01599 117 aa2.89□□□□□ -1.95
SMC6-202ENST00000381272 IGLV2-11P01706 119 aa2.89□□□□□ -1.95
SMC6-202ENST00000381272 IGHV3-23P01764 117 aa2.89□□□□□ -1.95
SMC6-202ENST00000381272 FCGR2BP31994 310 aaPredicted RBP2.89□□□□□ -1.95
SMC6-202ENST00000381272 CA7P43166 264 aa2.89□□□□□ -1.95
SMC6-202ENST00000381272 HNRNPA3P51991 378 aaKnown RBP2.89□□□□□ -1.95
SMC6-202ENST00000381272 PLP1P60201 277 aa2.89□□□□□ -1.95
SMC6-202ENST00000381272 RBPJQ06330 500 aa2.89□□□□□ -1.95
SMC6-202ENST00000381272 ZNF672Q499Z4 452 aaPredicted RBP2.89□□□□□ -1.95
SMC6-202ENST00000381272 ATP5L2Q7Z4Y8 100 aa2.89□□□□□ -1.95
SMC6-202ENST00000381272 Q86TA4 180 aa2.89□□□□□ -1.95
SMC6-202ENST00000381272 MUC15Q8N387 334 aa2.89□□□□□ -1.95
SMC6-202ENST00000381272 STPG4Q8N801 248 aa2.89□□□□□ -1.95
SMC6-202ENST00000381272 OR8B3Q8NGG8 313 aa2.89□□□□□ -1.95
SMC6-202ENST00000381272 TNFRSF14Q92956 283 aa2.89□□□□□ -1.95
SMC6-202ENST00000381272 ZC2HC1AQ96GY0 325 aa2.89□□□□□ -1.95
SMC6-202ENST00000381272 OR8B2Q96RD0 313 aa2.89□□□□□ -1.95
SMC6-202ENST00000381272 CITED2Q99967 270 aaPredicted RBP2.89□□□□□ -1.95
SMC6-202ENST00000381272 MCRIP2Q9BUT9 160 aaKnown RBP2.89□□□□□ -1.95
SMC6-202ENST00000381272 OTORQ9NRC9 128 aa2.89□□□□□ -1.95
SMC6-202ENST00000381272 ZNF492Q9P255 531 aa2.89□□□□□ -1.95
SMC6-202ENST00000381272 UQCR10Q9UDW1 63 aa2.89□□□□□ -1.95
SMC6-202ENST00000381272 TP73-AS1Q9UF72 201 aa2.89□□□□□ -1.95
SMC6-202ENST00000381272 TIMM8BQ9Y5J9 83 aaPredicted RBP2.89□□□□□ -1.95
SMC6-202ENST00000381272 APC2O95996 2303 aa2.88□□□□□ -1.95
SMC6-202ENST00000381272 TRBV19A0A075B6N1 114 aa2.88□□□□□ -1.95
SMC6-202ENST00000381272 TRAV9-2A0A087WT02 112 aa2.88□□□□□ -1.95
SMC6-202ENST00000381272 LOC102724200A0A096LPH7 203 aaPredicted RBP2.88□□□□□ -1.95
SMC6-202ENST00000381272 IGHV1-24A0A0C4DH33 117 aa2.88□□□□□ -1.95
SMC6-202ENST00000381272 K7EIM0 57 aa2.88□□□□□ -1.95
SMC6-202ENST00000381272 CHEK1O14757 476 aa2.88□□□□□ -1.95
SMC6-202ENST00000381272 HLA-DRB1P01911 266 aa2.88□□□□□ -1.95
SMC6-202ENST00000381272 CSN3P07498 182 aa2.88□□□□□ -1.95
SMC6-202ENST00000381272 IGLL1P15814 213 aa2.88□□□□□ -1.95
SMC6-202ENST00000381272 MT3P25713 68 aa2.88□□□□□ -1.95
SMC6-202ENST00000381272 HINT1P49773 126 aaPredicted RBP2.88□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms