RNA–Protein interactions for RNA: ENST00000381020.7

CDX2-201, Transcript of caudal type homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDX2, Length 4,053 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX2-201ENST00000381020 ID1P41134 155 aa9.86□□□□□ -0.83
CDX2-201ENST00000381020 PSG3Q16557 428 aa9.86□□□□□ -0.83
CDX2-201ENST00000381020 C18orf15Q96N68 181 aa9.86□□□□□ -0.83
CDX2-201ENST00000381020 KLK15Q9H2R5 256 aa9.86□□□□□ -0.83
CDX2-201ENST00000381020 IGHV4-38-2P0DP08 117 aa9.86□□□□□ -0.83
CDX2-201ENST00000381020 PRELID3AQ96N28 172 aa9.86□□□□□ -0.83
CDX2-201ENST00000381020 C8orf49Q96NF6 230 aa9.86□□□□□ -0.83
CDX2-201ENST00000381020 HSPB8Q9UJY1 196 aa9.86□□□□□ -0.83
CDX2-201ENST00000381020 F2Z2F3 143 aa9.86□□□□□ -0.83
CDX2-201ENST00000381020 TYMSP04818 313 aa9.86□□□□□ -0.83
CDX2-201ENST00000381020 YPEL3P61236 119 aaPredicted RBP9.86□□□□□ -0.83
CDX2-201ENST00000381020 CTAG1AP78358 180 aa9.86□□□□□ -0.83
CDX2-201ENST00000381020 SLAQ13239 276 aa9.86□□□□□ -0.83
CDX2-201ENST00000381020 NPFFR1Q9GZQ6 430 aa9.86□□□□□ -0.83
CDX2-201ENST00000381020 ATMQ13315 3056 aa9.85□□□□□ -0.83
CDX2-201ENST00000381020 SNAI2O43623 268 aa9.85□□□□□ -0.83
CDX2-201ENST00000381020 C1orf122Q6ZSJ8 110 aa9.85□□□□□ -0.83
CDX2-201ENST00000381020 NIT1Q86X76 327 aa9.85□□□□□ -0.83
CDX2-201ENST00000381020 DYNLRB2Q8TF09 96 aa9.85□□□□□ -0.83
CDX2-201ENST00000381020 CENPVL3A0A0U1RRI6 287 aa9.85□□□□□ -0.83
CDX2-201ENST00000381020 ARMS2P0C7Q2 107 aa9.85□□□□□ -0.83
CDX2-201ENST00000381020 LYZL1Q6UWQ5 148 aa9.85□□□□□ -0.83
CDX2-201ENST00000381020 REC114Q7Z4M0 266 aa9.85□□□□□ -0.83
CDX2-201ENST00000381020 OR4X2Q8NGF9 303 aa9.85□□□□□ -0.83
CDX2-201ENST00000381020 FAM110DQ8TAY7 271 aaPredicted RBP9.85□□□□□ -0.83
CDX2-201ENST00000381020 FXYD7P58549 80 aa9.85□□□□□ -0.83
CDX2-201ENST00000381020 SIGLEC15Q6ZMC9 328 aa9.85□□□□□ -0.83
CDX2-201ENST00000381020 C1orf159Q96HA4 380 aa9.85□□□□□ -0.83
CDX2-201ENST00000381020 LOC102724200A0A096LPH7 203 aaPredicted RBP9.84□□□□□ -0.83
CDX2-201ENST00000381020 A0A1W2PPR1 153 aa9.84□□□□□ -0.83
CDX2-201ENST00000381020 RPS20P60866 119 aaKnown RBP9.84□□□□□ -0.83
CDX2-201ENST00000381020 OVOL3O00110 214 aa9.84□□□□□ -0.83
CDX2-201ENST00000381020 NCR2O95944 276 aa9.84□□□□□ -0.83
CDX2-201ENST00000381020 EBLN2Q6P2I7 272 aa9.84□□□□□ -0.83
CDX2-201ENST00000381020 Q8N9W7 124 aa9.84□□□□□ -0.83
CDX2-201ENST00000381020 PYGO2Q9BRQ0 406 aa9.84□□□□□ -0.83
CDX2-201ENST00000381020 SLC50A1Q9BRV3 221 aa9.84□□□□□ -0.83
CDX2-201ENST00000381020 PRORYQ9H606 182 aa9.84□□□□□ -0.83
CDX2-201ENST00000381020 NACAE9PAV3 2078 aa9.84□□□□□ -0.83
CDX2-201ENST00000381020 M0QZK8 103 aa9.84□□□□□ -0.83
CDX2-201ENST00000381020 BLCAPP62952 87 aa9.84□□□□□ -0.83
CDX2-201ENST00000381020 MCRIP2Q9BUT9 160 aaKnown RBP9.84□□□□□ -0.83
CDX2-201ENST00000381020 TET2Q6N021 2002 aaPredicted RBP9.84□□□□□ -0.83
CDX2-201ENST00000381020 FN1P02751 2386 aaKnown RBP9.83□□□□□ -0.84
CDX2-201ENST00000381020 CBY3A6NI87 242 aa9.83□□□□□ -0.84
CDX2-201ENST00000381020 H3BRN7 92 aa9.83□□□□□ -0.84
CDX2-201ENST00000381020 SH2D1AO60880 128 aa9.83□□□□□ -0.84
CDX2-201ENST00000381020 RNASE4P34096 147 aaKnown RBP9.83□□□□□ -0.84
CDX2-201ENST00000381020 FAM74A4Q5TZK3 123 aa9.83□□□□□ -0.84
CDX2-201ENST00000381020 A0A1W2PRX2 142 aa9.83□□□□□ -0.84
CDX2-201ENST00000381020 LDLRAD2Q5SZI1 272 aa9.83□□□□□ -0.84
CDX2-201ENST00000381020 TMEM70Q9BUB7 260 aa9.83□□□□□ -0.84
CDX2-201ENST00000381020 LINC01548A6NM66 108 aa9.83□□□□□ -0.84
CDX2-201ENST00000381020 NUPR1O60356 82 aa9.83□□□□□ -0.84
CDX2-201ENST00000381020 GP9P14770 177 aa9.83□□□□□ -0.84
CDX2-201ENST00000381020 LMO4P61968 165 aa9.83□□□□□ -0.84
CDX2-201ENST00000381020 LY6G5BQ8NDX9 201 aa9.83□□□□□ -0.84
CDX2-201ENST00000381020 OR10AG1Q8NH19 301 aa9.83□□□□□ -0.84
CDX2-201ENST00000381020 BEX4Q9NWD9 120 aaPredicted RBP9.83□□□□□ -0.84
CDX2-201ENST00000381020 NDUFS6O75380 124 aaKnown RBP9.82□□□□□ -0.84
CDX2-201ENST00000381020 LINC00614P0C842 121 aa9.82□□□□□ -0.84
CDX2-201ENST00000381020 TMEM95Q3KNT9 176 aa9.82□□□□□ -0.84
CDX2-201ENST00000381020 TRBV7-1A0A0A6YYK4 115 aa9.82□□□□□ -0.84
CDX2-201ENST00000381020 ZNF664Q8N3J9 261 aa9.82□□□□□ -0.84
CDX2-201ENST00000381020 TTC9CQ8N5M4 171 aa9.82□□□□□ -0.84
CDX2-201ENST00000381020 SOX21Q9Y651 276 aaPredicted RBP9.82□□□□□ -0.84
CDX2-201ENST00000381020 IGLV11-55A0A075B6I3 123 aa9.82□□□□□ -0.84
CDX2-201ENST00000381020 IGHV3OR16-12A0A075B7B8 117 aa9.82□□□□□ -0.84
CDX2-201ENST00000381020 NDUFS8O00217 210 aa9.82□□□□□ -0.84
CDX2-201ENST00000381020 EVI2AP22794 236 aa9.82□□□□□ -0.84
CDX2-201ENST00000381020 ORMDL3Q8N138 153 aa9.82□□□□□ -0.84
CDX2-201ENST00000381020 TMEM75Q8N9X5 138 aa9.82□□□□□ -0.84
CDX2-201ENST00000381020 NPBQ8NG41 125 aa9.82□□□□□ -0.84
CDX2-201ENST00000381020 ZC2HC1AQ96GY0 325 aa9.82□□□□□ -0.84
CDX2-201ENST00000381020 FANCD2OSQ96PS1 177 aa9.82□□□□□ -0.84
CDX2-201ENST00000381020 MAP1LC3AQ9H492 121 aa9.82□□□□□ -0.84
CDX2-201ENST00000381020 ZMAT5Q9UDW3 170 aaKnown RBP9.82□□□□□ -0.84
CDX2-201ENST00000381020 ERASQ7Z444 233 aa9.82□□□□□ -0.84
CDX2-201ENST00000381020 LYPD1Q8N2G4 141 aa9.82□□□□□ -0.84
CDX2-201ENST00000381020 DEFB104AQ8WTQ1 72 aa9.82□□□□□ -0.84
CDX2-201ENST00000381020 ZNF414Q96IQ9 312 aa9.82□□□□□ -0.84
CDX2-201ENST00000381020 TMEM213A2RRL7 107 aa9.81□□□□□ -0.84
CDX2-201ENST00000381020 TMEM8BA6NDV4 472 aa9.81□□□□□ -0.84
CDX2-201ENST00000381020 TNFRSF13BO14836 293 aaPredicted RBP9.81□□□□□ -0.84
CDX2-201ENST00000381020 CRYGCP07315 174 aa9.81□□□□□ -0.84
CDX2-201ENST00000381020 CTSGP08311 255 aa9.81□□□□□ -0.84
CDX2-201ENST00000381020 OR10J3Q5JRS4 329 aa9.81□□□□□ -0.84
CDX2-201ENST00000381020 PIP4P2Q8N4L2 257 aa9.81□□□□□ -0.84
CDX2-201ENST00000381020 VGLL1Q99990 258 aa9.81□□□□□ -0.84
CDX2-201ENST00000381020 SIRPDQ9H106 197 aa9.81□□□□□ -0.84
CDX2-201ENST00000381020 INS-IGF2F8WCM5 200 aa9.81□□□□□ -0.84
CDX2-201ENST00000381020 SMKR1H3BMG3 65 aa9.81□□□□□ -0.84
CDX2-201ENST00000381020 ZNF688P0C7X2 276 aa9.81□□□□□ -0.84
CDX2-201ENST00000381020 NMUP48645 174 aa9.81□□□□□ -0.84
CDX2-201ENST00000381020 FAM159AQ6UWV7 190 aa9.81□□□□□ -0.84
CDX2-201ENST00000381020 AMN1Q8IY45 258 aa9.81□□□□□ -0.84
CDX2-201ENST00000381020 PRSS22Q9GZN4 317 aa9.81□□□□□ -0.84
CDX2-201ENST00000381020 OR4C46A6NHA9 309 aa9.81□□□□□ -0.84
CDX2-201ENST00000381020 IFITM10A6NMD0 228 aa9.81□□□□□ -0.84
CDX2-201ENST00000381020 C11orf71Q6IPW1 123 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms