RNA–Protein interactions for RNA: ENST00000380285.7

SNX1-202, Transcript of sorting nexin 1, humanhuman

TSL 1 (best)

Gene SNX1, Length 8,119 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-202ENST00000380285 C20orf204Q6ZNR8 217 aa7.76□□□□□ -1.17
SNX1-202ENST00000380285 IGHV3-64A0A075B6Q5 118 aa7.76□□□□□ -1.17
SNX1-202ENST00000380285 ZNF672Q499Z4 452 aaPredicted RBP7.76□□□□□ -1.17
SNX1-202ENST00000380285 PYGO2Q9BRQ0 406 aa7.76□□□□□ -1.17
SNX1-202ENST00000380285 IGKV1D-17A0A075B6S4 117 aa7.76□□□□□ -1.17
SNX1-202ENST00000380285 HLA-DMBP28068 263 aa7.76□□□□□ -1.17
SNX1-202ENST00000380285 C10orf55Q5SWW7 151 aa7.76□□□□□ -1.17
SNX1-202ENST00000380285 CEND1Q8N111 149 aa7.76□□□□□ -1.17
SNX1-202ENST00000380285 NAA38Q9BRA0 125 aaKnown RBP7.76□□□□□ -1.17
SNX1-202ENST00000380285 TRAV8-3A0A0A6YYJ7 113 aa7.76□□□□□ -1.17
SNX1-202ENST00000380285 TRAV40A0A0B4J280 105 aa7.76□□□□□ -1.17
SNX1-202ENST00000380285 MBD3L4A6NDZ8 208 aaPredicted RBP7.76□□□□□ -1.17
SNX1-202ENST00000380285 MBD3L3A6NE82 208 aaPredicted RBP7.76□□□□□ -1.17
SNX1-202ENST00000380285 MBD3L5A6NJ08 208 aaPredicted RBP7.76□□□□□ -1.17
SNX1-202ENST00000380285 CDKN1BP46527 198 aa7.76□□□□□ -1.17
SNX1-202ENST00000380285 KLF5Q13887 457 aaPredicted RBP7.76□□□□□ -1.17
SNX1-202ENST00000380285 C14orf178Q8N769 122 aaPredicted RBP7.76□□□□□ -1.17
SNX1-202ENST00000380285 MBD3L2Q8NHZ7 208 aaPredicted RBP7.76□□□□□ -1.17
SNX1-202ENST00000380285 PINLYPA6NC86 204 aa7.76□□□□□ -1.17
SNX1-202ENST00000380285 EFNA4P52798 201 aa7.76□□□□□ -1.17
SNX1-202ENST00000380285 PAX9P55771 341 aa7.76□□□□□ -1.17
SNX1-202ENST00000380285 SLC25A16P16260 332 aa7.76□□□□□ -1.17
SNX1-202ENST00000380285 B3GALT5-AS1P59052 145 aa7.76□□□□□ -1.17
SNX1-202ENST00000380285 PRIMA1Q86XR5 153 aa7.76□□□□□ -1.17
SNX1-202ENST00000380285 DAZ1Q9NQZ3 744 aaKnown RBP7.76□□□□□ -1.17
SNX1-202ENST00000380285 CNOT1A5YKK6 2376 aaKnown RBP7.75□□□□□ -1.17
SNX1-202ENST00000380285 SRD5A1P18405 259 aa7.75□□□□□ -1.17
SNX1-202ENST00000380285 SS18Q15532 418 aa7.75□□□□□ -1.17
SNX1-202ENST00000380285 GAGE2AQ6NT46 116 aa7.75□□□□□ -1.17
SNX1-202ENST00000380285 A0A087WX48 190 aa7.75□□□□□ -1.17
SNX1-202ENST00000380285 Q8TCH9 128 aa7.75□□□□□ -1.17
SNX1-202ENST00000380285 PLXNB3Q9ULL4 1909 aa7.75□□□□□ -1.17
SNX1-202ENST00000380285 KIR2DL5BA0A0G2JN68 375 aa7.75□□□□□ -1.17
SNX1-202ENST00000380285 KIR2DL5BA0A0G2JPC4 375 aa7.75□□□□□ -1.17
SNX1-202ENST00000380285 I3L3M4 83 aa7.75□□□□□ -1.17
SNX1-202ENST00000380285 HLA-DRB4P13762 266 aa7.75□□□□□ -1.17
SNX1-202ENST00000380285 C6orf226Q5I0X4 101 aa7.75□□□□□ -1.17
SNX1-202ENST00000380285 KIR2DL5AQ8N109 375 aa7.75□□□□□ -1.17
SNX1-202ENST00000380285 HLA-DRB4X5D2U9 266 aa7.75□□□□□ -1.17
SNX1-202ENST00000380285 TRBV19A0A075B6N1 114 aa7.75□□□□□ -1.17
SNX1-202ENST00000380285 GAGE12HA6NDE8 117 aa7.75□□□□□ -1.17
SNX1-202ENST00000380285 F8VRH5 84 aa7.75□□□□□ -1.17
SNX1-202ENST00000380285 ZNF833PQ6ZTB9 187 aa7.75□□□□□ -1.17
SNX1-202ENST00000380285 LINC00311Q8N616 119 aa7.75□□□□□ -1.17
SNX1-202ENST00000380285 C20orf78Q9BR46 151 aa7.75□□□□□ -1.17
SNX1-202ENST00000380285 IGHG4P01861 327 aa7.75□□□□□ -1.17
SNX1-202ENST00000380285 BVES-AS1Q5T3Y7 98 aa7.75□□□□□ -1.17
SNX1-202ENST00000380285 STPG4Q8N801 248 aa7.75□□□□□ -1.17
SNX1-202ENST00000380285 MDS2Q8NDY4 140 aa7.75□□□□□ -1.17
SNX1-202ENST00000380285 PRO1854Q9UHT4 67 aa7.75□□□□□ -1.17
SNX1-202ENST00000380285 CACNA1EQ15878 2313 aa7.74□□□□□ -1.17
SNX1-202ENST00000380285 NOTCH3Q9UM47 2321 aa7.74□□□□□ -1.17
SNX1-202ENST00000380285 F8WEM9 126 aa7.74□□□□□ -1.17
SNX1-202ENST00000380285 A0A1W2PPI3 338 aa7.74□□□□□ -1.17
SNX1-202ENST00000380285 IGHG3P01860 377 aa7.74□□□□□ -1.17
SNX1-202ENST00000380285 SPXQ9BT56 116 aa7.74□□□□□ -1.17
SNX1-202ENST00000380285 C2orf66Q6UXQ4 117 aa7.74□□□□□ -1.17
SNX1-202ENST00000380285 C1orf147Q96MC9 270 aaPredicted RBP7.74□□□□□ -1.17
SNX1-202ENST00000380285 ACYP1P07311 99 aa7.74□□□□□ -1.17
SNX1-202ENST00000380285 NPSP0C0P6 89 aa7.74□□□□□ -1.17
SNX1-202ENST00000380285 IGLL1P15814 213 aa7.74□□□□□ -1.17
SNX1-202ENST00000380285 THAP8Q8NA92 274 aa7.74□□□□□ -1.17
SNX1-202ENST00000380285 UBL5Q9BZL1 73 aa7.74□□□□□ -1.17
SNX1-202ENST00000380285 TSSC4Q9Y5U2 329 aaPredicted RBP7.74□□□□□ -1.17
SNX1-202ENST00000380285 TICRRQ7Z2Z1 1910 aa7.73□□□□□ -1.17
SNX1-202ENST00000380285 Q8TAT8 98 aa7.73□□□□□ -1.17
SNX1-202ENST00000380285 SLX1AQ9BQ83 275 aa7.73□□□□□ -1.17
SNX1-202ENST00000380285 NUP210Q8TEM1 1887 aaPredicted RBP7.73□□□□□ -1.17
SNX1-202ENST00000380285 IGKV1-6A0A0C4DH72 117 aa7.73□□□□□ -1.17
SNX1-202ENST00000380285 SHISA9B4DS77 424 aa7.73□□□□□ -1.17
SNX1-202ENST00000380285 LTBRP36941 435 aa7.73□□□□□ -1.17
SNX1-202ENST00000380285 NCOR1O75376 2440 aa7.73□□□□□ -1.17
SNX1-202ENST00000380285 MRPL51Q4U2R6 128 aaKnown RBP7.73□□□□□ -1.17
SNX1-202ENST00000380285 FAM110DQ8TAY7 271 aaPredicted RBP7.73□□□□□ -1.17
SNX1-202ENST00000380285 C1orf43Q9BWL3 253 aa7.73□□□□□ -1.17
SNX1-202ENST00000380285 TRAV13-2A0A0B4J235 113 aa7.73□□□□□ -1.17
SNX1-202ENST00000380285 CD33P20138 364 aa7.73□□□□□ -1.17
SNX1-202ENST00000380285 METRNQ9UJH8 293 aa7.73□□□□□ -1.17
SNX1-202ENST00000380285 COLQQ9Y215 455 aaPredicted RBP7.73□□□□□ -1.17
SNX1-202ENST00000380285 TP53TG1Q9Y2A0 90 aa7.73□□□□□ -1.17
SNX1-202ENST00000380285 ZNF726P1Q15940 193 aa7.72□□□□□ -1.17
SNX1-202ENST00000380285 K7EM74 188 aa7.72□□□□□ -1.17
SNX1-202ENST00000380285 TFF1P04155 84 aa7.72□□□□□ -1.17
SNX1-202ENST00000380285 CFHR2P36980 270 aa7.72□□□□□ -1.17
SNX1-202ENST00000380285 TRACP01848 142 aa7.72□□□□□ -1.17
SNX1-202ENST00000380285 GATA3P23771 443 aa7.72□□□□□ -1.17
SNX1-202ENST00000380285 IL15RAQ13261 267 aa7.72□□□□□ -1.17
SNX1-202ENST00000380285 SMKR1H3BMG3 65 aa7.72□□□□□ -1.17
SNX1-202ENST00000380285 POU2AF1Q16633 256 aa7.72□□□□□ -1.17
SNX1-202ENST00000380285 ARHGAP21Q5T5U3 1957 aa7.72□□□□□ -1.17
SNX1-202ENST00000380285 DENND4AQ7Z401 1863 aa7.72□□□□□ -1.17
SNX1-202ENST00000380285 IGKV1-16P04430 117 aa7.72□□□□□ -1.17
SNX1-202ENST00000380285 HS3ST6Q96QI5 342 aa7.72□□□□□ -1.17
SNX1-202ENST00000380285 TRGV1A0A0A0MS02 117 aa7.72□□□□□ -1.17
SNX1-202ENST00000380285 CD24P25063 80 aa7.72□□□□□ -1.17
SNX1-202ENST00000380285 VWC2Q2TAL6 325 aa7.72□□□□□ -1.17
SNX1-202ENST00000380285 OBSL1O75147 1896 aa7.71□□□□□ -1.17
SNX1-202ENST00000380285 H3BRN7 92 aa7.71□□□□□ -1.17
SNX1-202ENST00000380285 KLHDC3Q9BQ90 382 aa7.71□□□□□ -1.17
SNX1-202ENST00000380285 C8orf31Q8N9H6 132 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms