RNA–Protein interactions for RNA: ENST00000379361.4

PTCHD1-201, Transcript of patched domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCHD1, Length 13,714 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1-201ENST00000379361 LYPD1Q8N2G4 141 aa9.21□□□□□ -0.94
PTCHD1-201ENST00000379361 MP68P56378 58 aa9.21□□□□□ -0.94
PTCHD1-201ENST00000379361 MPTX1A8MV57 137 aa9.21□□□□□ -0.94
PTCHD1-201ENST00000379361 CTHRC1Q96CG8 243 aa9.21□□□□□ -0.94
PTCHD1-201ENST00000379361 C1QL2Q7Z5L3 287 aa9.21□□□□□ -0.94
PTCHD1-201ENST00000379361 RPL23P62829 140 aaKnown RBP9.21□□□□□ -0.94
PTCHD1-201ENST00000379361 HAMPP81172 84 aa9.2□□□□□ -0.94
PTCHD1-201ENST00000379361 LINC00518Q8N0U6 118 aa9.2□□□□□ -0.94
PTCHD1-201ENST00000379361 TRACP01848 142 aa9.2□□□□□ -0.94
PTCHD1-201ENST00000379361 LIME1Q9H400 295 aa9.2□□□□□ -0.94
PTCHD1-201ENST00000379361 BCL6BQ8N143 479 aaPredicted RBP9.2□□□□□ -0.94
PTCHD1-201ENST00000379361 PDE6HQ13956 83 aa9.2□□□□□ -0.94
PTCHD1-201ENST00000379361 Q96MF0 132 aa9.2□□□□□ -0.94
PTCHD1-201ENST00000379361 CARHSP1Q9Y2V2 147 aaKnown RBP9.2□□□□□ -0.94
PTCHD1-201ENST00000379361 EXOC3-AS1Q8N2X6 119 aa9.2□□□□□ -0.94
PTCHD1-201ENST00000379361 NBL1P41271 181 aa9.2□□□□□ -0.94
PTCHD1-201ENST00000379361 CD200R1LQ6Q8B3 271 aa9.2□□□□□ -0.94
PTCHD1-201ENST00000379361 NDUFB1O75438 58 aa9.2□□□□□ -0.94
PTCHD1-201ENST00000379361 RTBDNQ9BSG5 229 aaPredicted RBP9.2□□□□□ -0.94
PTCHD1-201ENST00000379361 FUSP35637 526 aaKnown RBP eCLIP9.2□□□□□ -0.94
PTCHD1-201ENST00000379361 BRD3OSQ6XYD6 125 aa9.2□□□□□ -0.94
PTCHD1-201ENST00000379361 ZNF525Q8N782 197 aa9.2□□□□□ -0.94
PTCHD1-201ENST00000379361 PSG3Q16557 428 aa9.19□□□□□ -0.94
PTCHD1-201ENST00000379361 RPUSD1Q9UJJ7 312 aaKnown RBP9.19□□□□□ -0.94
PTCHD1-201ENST00000379361 GUSBP1Q15486 140 aa9.19□□□□□ -0.94
PTCHD1-201ENST00000379361 TMEM200BQ69YZ2 307 aa9.19□□□□□ -0.94
PTCHD1-201ENST00000379361 ETDCA0A1B0GVM5 59 aa9.19□□□□□ -0.94
PTCHD1-201ENST00000379361 EPOPA6NHQ4 379 aa9.19□□□□□ -0.94
PTCHD1-201ENST00000379361 IGHG4P01861 327 aa9.19□□□□□ -0.94
PTCHD1-201ENST00000379361 SYNJ2BPP57105 145 aa9.19□□□□□ -0.94
PTCHD1-201ENST00000379361 DEFB131AP59861 70 aa9.19□□□□□ -0.94
PTCHD1-201ENST00000379361 NDPQ00604 133 aa9.19□□□□□ -0.94
PTCHD1-201ENST00000379361 NHLRC3Q5JS37 347 aa9.19□□□□□ -0.94
PTCHD1-201ENST00000379361 HEPN1Q6WQI6 88 aa9.19□□□□□ -0.94
PTCHD1-201ENST00000379361 AMELYQ99218 206 aa9.19□□□□□ -0.94
PTCHD1-201ENST00000379361 KLRD1Q13241 179 aa9.19□□□□□ -0.94
PTCHD1-201ENST00000379361 IGHV1-24A0A0C4DH33 117 aa9.19□□□□□ -0.94
PTCHD1-201ENST00000379361 SH2D1AO60880 128 aa9.19□□□□□ -0.94
PTCHD1-201ENST00000379361 GAGE12JA6NER3 117 aa9.19□□□□□ -0.94
PTCHD1-201ENST00000379361 GAGE1Q13065 139 aa9.19□□□□□ -0.94
PTCHD1-201ENST00000379361 GAGE4Q13068 117 aa9.19□□□□□ -0.94
PTCHD1-201ENST00000379361 GAGE5Q13069 117 aa9.19□□□□□ -0.94
PTCHD1-201ENST00000379361 LYZL1Q6UWQ5 148 aa9.19□□□□□ -0.94
PTCHD1-201ENST00000379361 IGKV2D-24A0A075B6R9 120 aa9.19□□□□□ -0.94
PTCHD1-201ENST00000379361 IGKV1-5P01602 117 aa9.19□□□□□ -0.94
PTCHD1-201ENST00000379361 SH2D6Q7Z4S9 175 aa9.19□□□□□ -0.94
PTCHD1-201ENST00000379361 SPANXCQ9NY87 97 aa9.19□□□□□ -0.94
PTCHD1-201ENST00000379361 PRDM6Q9NQX0 595 aa9.19□□□□□ -0.94
PTCHD1-201ENST00000379361 PFN2P35080 140 aa9.18□□□□□ -0.94
PTCHD1-201ENST00000379361 BAALCQ8WXS3 180 aa9.18□□□□□ -0.94
PTCHD1-201ENST00000379361 J3QLI3 93 aa9.18□□□□□ -0.94
PTCHD1-201ENST00000379361 SMIM10L1P0DMW3 83 aa9.18□□□□□ -0.94
PTCHD1-201ENST00000379361 GZMMP51124 257 aa9.18□□□□□ -0.94
PTCHD1-201ENST00000379361 SMIM10Q96HG1 83 aa9.18□□□□□ -0.94
PTCHD1-201ENST00000379361 SRP19P09132 144 aaKnown RBP9.18□□□□□ -0.94
PTCHD1-201ENST00000379361 PLPPR1Q8TBJ4 325 aa9.18□□□□□ -0.94
PTCHD1-201ENST00000379361 PFN1P07737 140 aaKnown RBP9.18□□□□□ -0.94
PTCHD1-201ENST00000379361 PLSCR4Q9NRQ2 329 aa9.18□□□□□ -0.94
PTCHD1-201ENST00000379361 I3L3M4 83 aa9.18□□□□□ -0.94
PTCHD1-201ENST00000379361 ERVH48-1M5A8F1 160 aa9.18□□□□□ -0.94
PTCHD1-201ENST00000379361 ANGP03950 147 aaKnown RBP9.18□□□□□ -0.94
PTCHD1-201ENST00000379361 SIGLEC9Q9Y336 463 aa9.18□□□□□ -0.94
PTCHD1-201ENST00000379361 TIRAPP58753 221 aa9.18□□□□□ -0.94
PTCHD1-201ENST00000379361 RPL18AQ02543 176 aaKnown RBP9.18□□□□□ -0.94
PTCHD1-201ENST00000379361 RHPN1-AS1Q9BWJ2 59 aa9.18□□□□□ -0.94
PTCHD1-201ENST00000379361 ADAMTS20P59510 1910 aa9.18□□□□□ -0.94
PTCHD1-201ENST00000379361 TRBV6-7A0A0A0MS04 114 aa9.18□□□□□ -0.94
PTCHD1-201ENST00000379361 A0A1W2PPI3 338 aa9.18□□□□□ -0.94
PTCHD1-201ENST00000379361 ZNF329Q86UD4 541 aa9.18□□□□□ -0.94
PTCHD1-201ENST00000379361 GAS1P54826 345 aa9.18□□□□□ -0.94
PTCHD1-201ENST00000379361 FOXG1P55316 489 aaPredicted RBP9.18□□□□□ -0.94
PTCHD1-201ENST00000379361 H2BFSP57053 126 aa9.18□□□□□ -0.94
PTCHD1-201ENST00000379361 C9JAW5 83 aa9.17□□□□□ -0.94
PTCHD1-201ENST00000379361 A0A1B0GTI1 187 aa9.17□□□□□ -0.94
PTCHD1-201ENST00000379361 BUB1B-PAK6H3BSN5 160 aa9.17□□□□□ -0.94
PTCHD1-201ENST00000379361 RAMP1O60894 148 aa9.17□□□□□ -0.94
PTCHD1-201ENST00000379361 C5orf47Q569G3 176 aa9.17□□□□□ -0.94
PTCHD1-201ENST00000379361 IGF2BP2-AS1Q96M15 143 aa9.17□□□□□ -0.94
PTCHD1-201ENST00000379361 C9orf153Q5TBE3 101 aa9.17□□□□□ -0.94
PTCHD1-201ENST00000379361 SELENOKQ9Y6D0 94 aa9.17□□□□□ -0.94
PTCHD1-201ENST00000379361 HERVK_113P63121 156 aa9.17□□□□□ -0.94
PTCHD1-201ENST00000379361 BPESC1Q9GZL8 116 aa9.17□□□□□ -0.94
PTCHD1-201ENST00000379361 CD55P08174 381 aa9.17□□□□□ -0.94
PTCHD1-201ENST00000379361 SPINK8P0C7L1 97 aa9.17□□□□□ -0.94
PTCHD1-201ENST00000379361 IGHV1-18A0A0C4DH31 117 aa9.17□□□□□ -0.94
PTCHD1-201ENST00000379361 C1orf194Q5T5A4 169 aa9.17□□□□□ -0.94
PTCHD1-201ENST00000379361 CFHR3Q02985 330 aa9.17□□□□□ -0.94
PTCHD1-201ENST00000379361 MRPL36Q9P0J6 103 aaKnown RBP9.17□□□□□ -0.94
PTCHD1-201ENST00000379361 A0A1W2PR77 199 aa9.16□□□□□ -0.94
PTCHD1-201ENST00000379361 SCRT1Q9BWW7 348 aa9.16□□□□□ -0.94
PTCHD1-201ENST00000379361 GAGE12BA1L429 117 aa9.16□□□□□ -0.94
PTCHD1-201ENST00000379361 GAGE7O76087 117 aa9.16□□□□□ -0.94
PTCHD1-201ENST00000379361 GAGE12FP0CL80 117 aa9.16□□□□□ -0.94
PTCHD1-201ENST00000379361 GAGE12GP0CL81 117 aa9.16□□□□□ -0.94
PTCHD1-201ENST00000379361 GAGE12IP0CL82 117 aa9.16□□□□□ -0.94
PTCHD1-201ENST00000379361 LYNX1G3V0Z9 82 aa9.16□□□□□ -0.94
PTCHD1-201ENST00000379361 LYNX1P0DP58 116 aa9.16□□□□□ -0.94
PTCHD1-201ENST00000379361 EPG5Q9HCE0 2579 aa9.16□□□□□ -0.94
PTCHD1-201ENST00000379361 OCC1Q8TAD7 63 aa9.16□□□□□ -0.94
PTCHD1-201ENST00000379361 DEPPQ9NTK1 212 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms