RNA–Protein interactions for RNA: ENST00000378060.8

VPS36-201, Transcript of vacuolar protein sorting 36 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS36, Length 4,417 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-201ENST00000378060 TRAV8-1A0A0A6YYK1 113 aa6.8□□□□□ -1.32
VPS36-201ENST00000378060 BUB1B-PAK6H3BSN5 160 aa6.8□□□□□ -1.32
VPS36-201ENST00000378060 M0R1W7 72 aa6.8□□□□□ -1.32
VPS36-201ENST00000378060 SH2D1AO60880 128 aa6.8□□□□□ -1.32
VPS36-201ENST00000378060 IGLC2P0DOY2 106 aa6.8□□□□□ -1.32
VPS36-201ENST00000378060 IGLC3P0DOY3 106 aa6.8□□□□□ -1.32
VPS36-201ENST00000378060 GATA4P43694 442 aa6.8□□□□□ -1.32
VPS36-201ENST00000378060 COA6Q5JTJ3 125 aaKnown RBP6.8□□□□□ -1.32
VPS36-201ENST00000378060 SIGLEC15Q6ZMC9 328 aa6.8□□□□□ -1.32
VPS36-201ENST00000378060 KIR3DL3Q8N743 410 aa6.8□□□□□ -1.32
VPS36-201ENST00000378060 OR13C6PQ8NH95 151 aa6.8□□□□□ -1.32
VPS36-201ENST00000378060 LINC00477Q96M19 166 aa6.8□□□□□ -1.32
VPS36-201ENST00000378060 SHANK2-AS3Q9BTD1 123 aa6.8□□□□□ -1.32
VPS36-201ENST00000378060 NCR2O95944 276 aa6.79□□□□□ -1.32
VPS36-201ENST00000378060 MLANAQ16655 118 aa6.79□□□□□ -1.32
VPS36-201ENST00000378060 C3orf36Q3SXR2 165 aa6.79□□□□□ -1.32
VPS36-201ENST00000378060 LINC00479Q96M42 142 aa6.79□□□□□ -1.32
VPS36-201ENST00000378060 TRGV11A0A075B6L2 103 aa6.79□□□□□ -1.32
VPS36-201ENST00000378060 CNTFRP26992 372 aa6.79□□□□□ -1.32
VPS36-201ENST00000378060 RNF166Q96A37 237 aaPredicted RBP6.79□□□□□ -1.32
VPS36-201ENST00000378060 NDUFA4L2Q9NRX3 87 aa6.79□□□□□ -1.32
VPS36-201ENST00000378060 GTF3C1Q12789 2109 aa6.79□□□□□ -1.32
VPS36-201ENST00000378060 GTSCR1Q86UQ5 136 aa6.79□□□□□ -1.32
VPS36-201ENST00000378060 HAPLN4Q86UW8 402 aa6.79□□□□□ -1.32
VPS36-201ENST00000378060 V9GYV3 84 aa6.79□□□□□ -1.32
VPS36-201ENST00000378060 A0A1W2PPI3 338 aa6.79□□□□□ -1.32
VPS36-201ENST00000378060 PRB3Q04118 309 aaPredicted RBP6.79□□□□□ -1.32
VPS36-201ENST00000378060 ZC2HC1BQ5TFG8 222 aa6.79□□□□□ -1.32
VPS36-201ENST00000378060 LYPD6Q86Y78 171 aa6.79□□□□□ -1.32
VPS36-201ENST00000378060 DPH3P1Q9H4G8 78 aa6.79□□□□□ -1.32
VPS36-201ENST00000378060 PEMTQ9UBM1 199 aa6.79□□□□□ -1.32
VPS36-201ENST00000378060 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.78□□□□□ -1.32
VPS36-201ENST00000378060 TRAV41A0A0B4J266 112 aa6.78□□□□□ -1.32
VPS36-201ENST00000378060 GAGE12BA1L429 117 aa6.78□□□□□ -1.32
VPS36-201ENST00000378060 SMAD7O15105 426 aaKnown RBP6.78□□□□□ -1.32
VPS36-201ENST00000378060 Q6ZS92 163 aa6.78□□□□□ -1.32
VPS36-201ENST00000378060 VMO1Q7Z5L0 202 aa6.78□□□□□ -1.32
VPS36-201ENST00000378060 ERG28Q9UKR5 140 aa6.78□□□□□ -1.32
VPS36-201ENST00000378060 COL12A1Q99715 3063 aa6.78□□□□□ -1.32
VPS36-201ENST00000378060 MALRD1Q5VYJ5 2156 aa6.78□□□□□ -1.32
VPS36-201ENST00000378060 TRBV7-1A0A0A6YYK4 115 aa6.78□□□□□ -1.32
VPS36-201ENST00000378060 TMEM238C9JI98 176 aa6.78□□□□□ -1.32
VPS36-201ENST00000378060 KIR3DS1Q14943 382 aa6.78□□□□□ -1.32
VPS36-201ENST00000378060 POU2AF1Q16633 256 aa6.78□□□□□ -1.32
VPS36-201ENST00000378060 CD300EQ496F6 205 aaPredicted RBP6.78□□□□□ -1.32
VPS36-201ENST00000378060 DMRTC2Q8IXT2 367 aaPredicted RBP6.78□□□□□ -1.32
VPS36-201ENST00000378060 PYGO2Q9BRQ0 406 aa6.78□□□□□ -1.32
VPS36-201ENST00000378060 CDKN1AP38936 164 aa6.78□□□□□ -1.32
VPS36-201ENST00000378060 RPL15P61313 204 aaKnown RBP6.78□□□□□ -1.32
VPS36-201ENST00000378060 ZNF474Q6S9Z5 364 aaPredicted RBP6.78□□□□□ -1.32
VPS36-201ENST00000378060 Q6ZSR3 168 aa6.78□□□□□ -1.32
VPS36-201ENST00000378060 Q6ZWC4 215 aa6.78□□□□□ -1.32
VPS36-201ENST00000378060 Q8TCH9 128 aa6.78□□□□□ -1.32
VPS36-201ENST00000378060 PLEKHB2Q96CS7 222 aa6.78□□□□□ -1.32
VPS36-201ENST00000378060 LINC01587Q99440 93 aa6.78□□□□□ -1.32
VPS36-201ENST00000378060 EML6Q6ZMW3 1958 aa6.78□□□□□ -1.32
VPS36-201ENST00000378060 VCYO14598 125 aa6.77□□□□□ -1.33
VPS36-201ENST00000378060 GAGE1Q13065 139 aa6.77□□□□□ -1.33
VPS36-201ENST00000378060 AMN1Q8IY45 258 aa6.77□□□□□ -1.33
VPS36-201ENST00000378060 TMEM75Q8N9X5 138 aa6.77□□□□□ -1.33
VPS36-201ENST00000378060 SSC4DQ8WTU2 575 aa6.77□□□□□ -1.33
VPS36-201ENST00000378060 GLMPQ8WWB7 406 aa6.77□□□□□ -1.33
VPS36-201ENST00000378060 CYYR1Q96J86 154 aa6.77□□□□□ -1.33
VPS36-201ENST00000378060 PRSS22Q9GZN4 317 aa6.77□□□□□ -1.33
VPS36-201ENST00000378060 NOTCH2Q04721 2471 aa6.77□□□□□ -1.33
VPS36-201ENST00000378060 A0A1B0GUS0 222 aa6.77□□□□□ -1.33
VPS36-201ENST00000378060 GGTLC3B5MD39 225 aa6.77□□□□□ -1.33
VPS36-201ENST00000378060 ARMS2P0C7Q2 107 aa6.77□□□□□ -1.33
VPS36-201ENST00000378060 RIPPLY3P57055 190 aa6.77□□□□□ -1.33
VPS36-201ENST00000378060 LHFPL4Q7Z7J7 247 aa6.77□□□□□ -1.33
VPS36-201ENST00000378060 DTX1Q86Y01 620 aa6.77□□□□□ -1.33
VPS36-201ENST00000378060 IGKV3OR2-268A0A0C4DH90 116 aa6.77□□□□□ -1.33
VPS36-201ENST00000378060 SMIM27A0A1W2PRY6 76 aa6.77□□□□□ -1.33
VPS36-201ENST00000378060 TMEM158Q8WZ71 300 aa6.77□□□□□ -1.33
VPS36-201ENST00000378060 TRAV2A0A0B4J234 112 aa6.77□□□□□ -1.33
VPS36-201ENST00000378060 SFTA2Q6UW10 78 aa6.77□□□□□ -1.33
VPS36-201ENST00000378060 ZNF562Q6V9R5 426 aa6.77□□□□□ -1.33
VPS36-201ENST00000378060 LINC00311Q8N616 119 aa6.77□□□□□ -1.33
VPS36-201ENST00000378060 RNF138Q8WVD3 245 aa6.77□□□□□ -1.33
VPS36-201ENST00000378060 ITLN2Q8WWU7 325 aaPredicted RBP6.77□□□□□ -1.33
VPS36-201ENST00000378060 ACACBO00763 2458 aa6.76□□□□□ -1.33
VPS36-201ENST00000378060 TRBV7-9A0A0J9YWB2 115 aa6.76□□□□□ -1.33
VPS36-201ENST00000378060 NDUFB8O95169 186 aa6.76□□□□□ -1.33
VPS36-201ENST00000378060 GHRHP01286 108 aa6.76□□□□□ -1.33
VPS36-201ENST00000378060 PRTN3P24158 256 aa6.76□□□□□ -1.33
VPS36-201ENST00000378060 TMEM155Q4W5P6 130 aa6.76□□□□□ -1.33
VPS36-201ENST00000378060 TEX43Q6ZNM6 134 aa6.76□□□□□ -1.33
VPS36-201ENST00000378060 Q6ZR03 302 aa6.76□□□□□ -1.33
VPS36-201ENST00000378060 WDR86Q86TI4 376 aa6.76□□□□□ -1.33
VPS36-201ENST00000378060 DLX4Q92988 240 aaPredicted RBP6.76□□□□□ -1.33
VPS36-201ENST00000378060 RBMY1BA6NDE4 496 aaKnown RBP6.76□□□□□ -1.33
VPS36-201ENST00000378060 RBMY1EA6NEQ0 496 aaKnown RBP6.76□□□□□ -1.33
VPS36-201ENST00000378060 C15orf65H3BRN8 121 aa6.76□□□□□ -1.33
VPS36-201ENST00000378060 RBMY1DP0C7P1 496 aaKnown RBP6.76□□□□□ -1.33
VPS36-201ENST00000378060 RBMY1A1P0DJD3 496 aaKnown RBP6.76□□□□□ -1.33
VPS36-201ENST00000378060 RBMY1CP0DJD4 496 aa6.76□□□□□ -1.33
VPS36-201ENST00000378060 CD28P10747 220 aa6.76□□□□□ -1.33
VPS36-201ENST00000378060 EFNA4P52798 201 aa6.76□□□□□ -1.33
VPS36-201ENST00000378060 PAX2Q02962 417 aa6.76□□□□□ -1.33
VPS36-201ENST00000378060 FAM104BQ5XKR9 115 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms