RNA–Protein interactions for RNA: ENST00000377808.8

SMARCE1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 1,307 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-203ENST00000377808 C17orf112F2Z3M2 114 aa8.29□□□□□ -1.08
SMARCE1-203ENST00000377808 J3KRW8 73 aa8.29□□□□□ -1.08
SMARCE1-203ENST00000377808 CRXO43186 299 aaPredicted RBP8.29□□□□□ -1.08
SMARCE1-203ENST00000377808 PYYP10082 97 aa8.29□□□□□ -1.08
SMARCE1-203ENST00000377808 GUK1Q16774 197 aa8.29□□□□□ -1.08
SMARCE1-203ENST00000377808 CHAC2Q8WUX2 184 aa8.29□□□□□ -1.08
SMARCE1-203ENST00000377808 LINC01587Q99440 93 aa8.29□□□□□ -1.08
SMARCE1-203ENST00000377808 ATP5SQ99766 215 aa8.29□□□□□ -1.08
SMARCE1-203ENST00000377808 WDR61Q9GZS3 305 aaKnown RBP8.29□□□□□ -1.08
SMARCE1-203ENST00000377808 ZNF586Q9NXT0 402 aa8.29□□□□□ -1.08
SMARCE1-203ENST00000377808 TIMM9Q9Y5J7 89 aa8.29□□□□□ -1.08
SMARCE1-203ENST00000377808 KMT2AQ03164 3969 aa8.29□□□□□ -1.08
SMARCE1-203ENST00000377808 TEX48A0A1B0GUV7 120 aa8.29□□□□□ -1.08
SMARCE1-203ENST00000377808 PTTG1O95997 202 aa8.29□□□□□ -1.08
SMARCE1-203ENST00000377808 IFNA5P01569 189 aa8.29□□□□□ -1.08
SMARCE1-203ENST00000377808 PRM2P04554 102 aa8.29□□□□□ -1.08
SMARCE1-203ENST00000377808 RPL12P30050 165 aaKnown RBP8.29□□□□□ -1.08
SMARCE1-203ENST00000377808 CDKN1BP46527 198 aa8.29□□□□□ -1.08
SMARCE1-203ENST00000377808 TCTAP57738 103 aa8.29□□□□□ -1.08
SMARCE1-203ENST00000377808 LGALS9CQ6DKI2 356 aa8.29□□□□□ -1.08
SMARCE1-203ENST00000377808 MIR17HGQ75NE6 70 aa8.29□□□□□ -1.08
SMARCE1-203ENST00000377808 RPP25LQ8N5L8 163 aaKnown RBP8.29□□□□□ -1.08
SMARCE1-203ENST00000377808 SCGB1C1Q8TD33 95 aa8.29□□□□□ -1.08
SMARCE1-203ENST00000377808 NIPSNAP3BQ9BS92 247 aa8.29□□□□□ -1.08
SMARCE1-203ENST00000377808 RNF126Q9BV68 326 aa8.29□□□□□ -1.08
SMARCE1-203ENST00000377808 PARD6GQ9BYG4 376 aaPredicted RBP8.29□□□□□ -1.08
SMARCE1-203ENST00000377808 DKK2Q9UBU2 259 aa8.29□□□□□ -1.08
SMARCE1-203ENST00000377808 HSPB11Q9Y547 144 aa8.29□□□□□ -1.08
SMARCE1-203ENST00000377808 TRBV19A0A075B6N1 114 aa8.28□□□□□ -1.08
SMARCE1-203ENST00000377808 HIST1H1EP10412 219 aaKnown RBP8.28□□□□□ -1.08
SMARCE1-203ENST00000377808 DAD1P61803 113 aa8.28□□□□□ -1.08
SMARCE1-203ENST00000377808 SAT2Q96F10 170 aaPredicted RBP8.28□□□□□ -1.08
SMARCE1-203ENST00000377808 SLC25A2Q9BXI2 301 aa8.28□□□□□ -1.08
SMARCE1-203ENST00000377808 MED28Q9H204 178 aa8.28□□□□□ -1.08
SMARCE1-203ENST00000377808 TMEM14CQ9P0S9 112 aa8.28□□□□□ -1.08
SMARCE1-203ENST00000377808 APLNQ9ULZ1 77 aa8.28□□□□□ -1.08
SMARCE1-203ENST00000377808 EPPK1P58107 5090 aaKnown RBP8.28□□□□□ -1.08
SMARCE1-203ENST00000377808 OR10J4P0C629 311 aa8.27□□□□□ -1.09
SMARCE1-203ENST00000377808 TSPOP30536 169 aa8.27□□□□□ -1.09
SMARCE1-203ENST00000377808 FFAR4Q5NUL3 377 aa8.27□□□□□ -1.09
SMARCE1-203ENST00000377808 EXOC3-AS1Q8N2X6 119 aa8.27□□□□□ -1.09
SMARCE1-203ENST00000377808 NDUFAF3Q9BU61 184 aa8.27□□□□□ -1.09
SMARCE1-203ENST00000377808 MRPL32Q9BYC8 188 aaKnown RBP8.27□□□□□ -1.09
SMARCE1-203ENST00000377808 OR51M1Q9H341 326 aa8.27□□□□□ -1.09
SMARCE1-203ENST00000377808 AAMDCQ9H7C9 122 aa8.27□□□□□ -1.09
SMARCE1-203ENST00000377808 M0R3E3 92 aa8.26□□□□□ -1.09
SMARCE1-203ENST00000377808 OR7C2O60412 319 aa8.26□□□□□ -1.09
SMARCE1-203ENST00000377808 ZNF253O75346 499 aa8.26□□□□□ -1.09
SMARCE1-203ENST00000377808 LEPP41159 167 aa8.26□□□□□ -1.09
SMARCE1-203ENST00000377808 ERCC8Q13216 396 aa8.26□□□□□ -1.09
SMARCE1-203ENST00000377808 FCN2Q15485 313 aa8.26□□□□□ -1.09
SMARCE1-203ENST00000377808 FAM122CQ6P4D5 195 aa8.26□□□□□ -1.09
SMARCE1-203ENST00000377808 TMEM256Q8N2U0 113 aa8.26□□□□□ -1.09
SMARCE1-203ENST00000377808 PAXXQ9BUH6 204 aa8.26□□□□□ -1.09
SMARCE1-203ENST00000377808 FUT9Q9Y231 359 aa8.26□□□□□ -1.09
SMARCE1-203ENST00000377808 NDUFB4O95168 129 aa8.25□□□□□ -1.09
SMARCE1-203ENST00000377808 DEFB130BP0DP73 79 aa8.25□□□□□ -1.09
SMARCE1-203ENST00000377808 DEFB130AP0DP74 79 aa8.25□□□□□ -1.09
SMARCE1-203ENST00000377808 AZU1P20160 251 aa8.25□□□□□ -1.09
SMARCE1-203ENST00000377808 TAS2R60P59551 318 aa8.25□□□□□ -1.09
SMARCE1-203ENST00000377808 PDE6HQ13956 83 aa8.25□□□□□ -1.09
SMARCE1-203ENST00000377808 ICAM4Q14773 271 aa8.25□□□□□ -1.09
SMARCE1-203ENST00000377808 KIR3DS1Q14943 382 aa8.25□□□□□ -1.09
SMARCE1-203ENST00000377808 GFI1BQ5VTD9 330 aa8.25□□□□□ -1.09
SMARCE1-203ENST00000377808 C16orf74Q96GX8 76 aa8.25□□□□□ -1.09
SMARCE1-203ENST00000377808 PRELID1Q9Y255 219 aa8.25□□□□□ -1.09
SMARCE1-203ENST00000377808 NPIPB6E9PJ23 425 aa8.24□□□□□ -1.09
SMARCE1-203ENST00000377808 H7BYZ3 331 aa8.24□□□□□ -1.09
SMARCE1-203ENST00000377808 EIF3GO75821 320 aaKnown RBP eCLIP8.24□□□□□ -1.09
SMARCE1-203ENST00000377808 NBEAP1P0C6P0 100 aa8.24□□□□□ -1.09
SMARCE1-203ENST00000377808 CT45A10P0DMU9 189 aa8.24□□□□□ -1.09
SMARCE1-203ENST00000377808 UBE2L3P68036 154 aaKnown RBP8.24□□□□□ -1.09
SMARCE1-203ENST00000377808 CCDC28AQ8IWP9 274 aa8.24□□□□□ -1.09
SMARCE1-203ENST00000377808 RNF141Q8WVD5 230 aa8.24□□□□□ -1.09
SMARCE1-203ENST00000377808 MRPL53Q96EL3 112 aaKnown RBP8.24□□□□□ -1.09
SMARCE1-203ENST00000377808 FAM167A-AS1Q96KT0 104 aa8.24□□□□□ -1.09
SMARCE1-203ENST00000377808 WFDC1Q9HC57 220 aa8.24□□□□□ -1.09
SMARCE1-203ENST00000377808 IGKV2-40A0A087WW87 121 aaPredicted RBP8.23□□□□□ -1.09
SMARCE1-203ENST00000377808 TRAV12-3A0A0B4J271 114 aa8.23□□□□□ -1.09
SMARCE1-203ENST00000377808 LYRM9A8MSI8 78 aa8.23□□□□□ -1.09
SMARCE1-203ENST00000377808 IGKV2D-40P01614 121 aaPredicted RBP8.23□□□□□ -1.09
SMARCE1-203ENST00000377808 TAS2R45P59539 299 aa8.23□□□□□ -1.09
SMARCE1-203ENST00000377808 KHDC3LQ587J8 217 aa8.23□□□□□ -1.09
SMARCE1-203ENST00000377808 FXYD5Q96DB9 178 aa8.23□□□□□ -1.09
SMARCE1-203ENST00000377808 PHYHIPLQ96FC7 376 aa8.23□□□□□ -1.09
SMARCE1-203ENST00000377808 BIRC6Q9NR09 4857 aa8.22□□□□□ -1.09
SMARCE1-203ENST00000377808 A0A1W2PPV4 95 aa8.22□□□□□ -1.09
SMARCE1-203ENST00000377808 CSN1S1P47710 185 aa8.22□□□□□ -1.09
SMARCE1-203ENST00000377808 RANP62826 216 aaKnown RBP8.22□□□□□ -1.09
SMARCE1-203ENST00000377808 OXA1LQ15070 435 aa8.22□□□□□ -1.09
SMARCE1-203ENST00000377808 RGS21Q2M5E4 152 aa8.22□□□□□ -1.09
SMARCE1-203ENST00000377808 ACOT6Q3I5F7 207 aaPredicted RBP8.22□□□□□ -1.09
SMARCE1-203ENST00000377808 TMEM78Q5T7P6 136 aa8.22□□□□□ -1.09
SMARCE1-203ENST00000377808 UBE2DNLQ8IWF7 75 aa8.22□□□□□ -1.09
SMARCE1-203ENST00000377808 TMEM263Q8WUH6 116 aaKnown RBP8.22□□□□□ -1.09
SMARCE1-203ENST00000377808 ODF3Q96PU9 254 aa8.22□□□□□ -1.09
SMARCE1-203ENST00000377808 C20orf144Q9BQM9 153 aa8.22□□□□□ -1.09
SMARCE1-203ENST00000377808 NOP10Q9NPE3 64 aaKnown RBP8.22□□□□□ -1.09
SMARCE1-203ENST00000377808 TIMM8BQ9Y5J9 83 aaPredicted RBP8.22□□□□□ -1.09
SMARCE1-203ENST00000377808 C7orf71A4D174 169 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms