RNA–Protein interactions for RNA: ENST00000377270.7

FXN-201, Transcript of frataxin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FXN, Length 2,608 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-201ENST00000377270 RNF7Q9UBF6 113 aa12.36□□□□□ -0.43
FXN-201ENST00000377270 NPIPB6E9PJ23 425 aa12.36□□□□□ -0.43
FXN-201ENST00000377270 J3KT08 172 aa12.36□□□□□ -0.43
FXN-201ENST00000377270 CD40P25942 277 aa12.36□□□□□ -0.43
FXN-201ENST00000377270 PRR20EP86478 221 aa12.36□□□□□ -0.43
FXN-201ENST00000377270 PRR20CP86479 221 aa12.36□□□□□ -0.43
FXN-201ENST00000377270 PRR20DP86480 221 aa12.36□□□□□ -0.43
FXN-201ENST00000377270 PRR20BP86481 221 aa12.36□□□□□ -0.43
FXN-201ENST00000377270 PRR20AP86496 221 aa12.36□□□□□ -0.43
FXN-201ENST00000377270 DUX4L9Q6RFH8 374 aaPredicted RBP12.36□□□□□ -0.43
FXN-201ENST00000377270 CFHR4Q92496 578 aa12.36□□□□□ -0.43
FXN-201ENST00000377270 PLEKHA3Q9HB20 300 aa12.36□□□□□ -0.43
FXN-201ENST00000377270 IGHV1-46P01743 117 aa12.35□□□□□ -0.43
FXN-201ENST00000377270 RRN3P1Q2M238 152 aa12.35□□□□□ -0.43
FXN-201ENST00000377270 Q6ZQT7 251 aa12.35□□□□□ -0.43
FXN-201ENST00000377270 ATP5L2Q7Z4Y8 100 aa12.35□□□□□ -0.43
FXN-201ENST00000377270 LRRC75A-AS1Q8N1F1 130 aa12.35□□□□□ -0.43
FXN-201ENST00000377270 KIR2DL5BQ8NHK3 375 aa12.35□□□□□ -0.43
FXN-201ENST00000377270 SNRNP40Q96DI7 357 aaKnown RBP12.35□□□□□ -0.43
FXN-201ENST00000377270 IFI27L2Q9H2X8 130 aa12.35□□□□□ -0.43
FXN-201ENST00000377270 CEND1Q8N111 149 aa12.35□□□□□ -0.43
FXN-201ENST00000377270 ZNF503Q96F45 646 aa12.35□□□□□ -0.43
FXN-201ENST00000377270 S1PR3Q99500 378 aa12.35□□□□□ -0.43
FXN-201ENST00000377270 RASL11BQ9BPW5 248 aa12.35□□□□□ -0.43
FXN-201ENST00000377270 EDA2RQ9HAV5 297 aa12.35□□□□□ -0.43
FXN-201ENST00000377270 MUC6Q6W4X9 2439 aa12.34□□□□□ -0.43
FXN-201ENST00000377270 PTPRZ1P23471 2315 aaPredicted RBP12.34□□□□□ -0.43
FXN-201ENST00000377270 DSCAMO60469 2012 aa12.34□□□□□ -0.43
FXN-201ENST00000377270 LTAP01374 205 aa12.34□□□□□ -0.43
FXN-201ENST00000377270 C17orf58Q2M2W7 97 aa12.34□□□□□ -0.43
FXN-201ENST00000377270 C12orf74Q32Q52 190 aa12.34□□□□□ -0.43
FXN-201ENST00000377270 SGK494Q96LW2 274 aa12.34□□□□□ -0.43
FXN-201ENST00000377270 LINC00479Q96M42 142 aa12.34□□□□□ -0.43
FXN-201ENST00000377270 MSRB2Q9Y3D2 182 aa12.34□□□□□ -0.43
FXN-201ENST00000377270 PIEZO2Q9H5I5 2752 aa12.34□□□□□ -0.43
FXN-201ENST00000377270 ATMQ13315 3056 aa12.34□□□□□ -0.43
FXN-201ENST00000377270 ACACAQ13085 2346 aa12.34□□□□□ -0.43
FXN-201ENST00000377270 CGB3P0DN86 165 aa12.34□□□□□ -0.43
FXN-201ENST00000377270 CGB7P0DN87 165 aa12.34□□□□□ -0.43
FXN-201ENST00000377270 UCNP55089 124 aa12.34□□□□□ -0.43
FXN-201ENST00000377270 C1orf229Q6ZS94 237 aaPredicted RBP12.34□□□□□ -0.43
FXN-201ENST00000377270 TEN1Q86WV5 123 aa12.34□□□□□ -0.43
FXN-201ENST00000377270 OR8A1Q8NGG7 326 aa12.34□□□□□ -0.43
FXN-201ENST00000377270 MRPL32Q9BYC8 188 aaKnown RBP12.34□□□□□ -0.43
FXN-201ENST00000377270 C21orf62Q9NYP8 219 aa12.34□□□□□ -0.43
FXN-201ENST00000377270 TANC2Q9HCD6 1990 aa12.33□□□□□ -0.44
FXN-201ENST00000377270 A0A1B0GXF2 115 aa12.33□□□□□ -0.44
FXN-201ENST00000377270 HIGD1CA8MV81 97 aa12.33□□□□□ -0.44
FXN-201ENST00000377270 EMP1P54849 157 aa12.33□□□□□ -0.44
FXN-201ENST00000377270 ERVK-16P61578 105 aa12.33□□□□□ -0.44
FXN-201ENST00000377270 Q6Q795 121 aa12.33□□□□□ -0.44
FXN-201ENST00000377270 CCL13Q99616 98 aa12.33□□□□□ -0.44
FXN-201ENST00000377270 HIGD1BQ9P298 99 aa12.33□□□□□ -0.44
FXN-201ENST00000377270 KLF12Q9Y4X4 402 aa12.33□□□□□ -0.44
FXN-201ENST00000377270 TRAV3A0A0B4J244 114 aa12.32□□□□□ -0.44
FXN-201ENST00000377270 A0A0G2JNJ9 132 aa12.32□□□□□ -0.44
FXN-201ENST00000377270 NBL1P41271 181 aa12.32□□□□□ -0.44
FXN-201ENST00000377270 Q9UFV3 132 aa12.32□□□□□ -0.44
FXN-201ENST00000377270 NPFFO15130 113 aa12.32□□□□□ -0.44
FXN-201ENST00000377270 ASCL2Q99929 193 aa12.32□□□□□ -0.44
FXN-201ENST00000377270 NABP2Q9BQ15 211 aa12.32□□□□□ -0.44
FXN-201ENST00000377270 TTTY13Q9BZ97 58 aa12.32□□□□□ -0.44
FXN-201ENST00000377270 GAFA1Q96PS6 74 aa12.31□□□□□ -0.44
FXN-201ENST00000377270 APC2O95996 2303 aa12.31□□□□□ -0.44
FXN-201ENST00000377270 ZGRF1Q86YA3 2104 aa12.31□□□□□ -0.44
FXN-201ENST00000377270 HBBP68871 147 aa12.31□□□□□ -0.44
FXN-201ENST00000377270 CCL8P80075 99 aa12.31□□□□□ -0.44
FXN-201ENST00000377270 FAM216BQ8N7L0 139 aa12.31□□□□□ -0.44
FXN-201ENST00000377270 OR10J6PQ8NGY7 276 aa12.31□□□□□ -0.44
FXN-201ENST00000377270 MRAPQ8TCY5 172 aa12.31□□□□□ -0.44
FXN-201ENST00000377270 DMXL2Q8TDJ6 3036 aa12.31□□□□□ -0.44
FXN-201ENST00000377270 ROS1P08922 2347 aa12.3□□□□□ -0.44
FXN-201ENST00000377270 SAA2P0DJI9 122 aaPredicted RBP12.3□□□□□ -0.44
FXN-201ENST00000377270 CACNG7P62955 275 aa12.3□□□□□ -0.44
FXN-201ENST00000377270 SRSF2Q01130 221 aaKnown RBP12.3□□□□□ -0.44
FXN-201ENST00000377270 SMG1Q96Q15 3661 aaKnown RBP12.3□□□□□ -0.44
FXN-201ENST00000377270 TMSB15BA0A087X1C1 80 aa12.3□□□□□ -0.44
FXN-201ENST00000377270 KIR2DS2P43631 304 aa12.3□□□□□ -0.44
FXN-201ENST00000377270 PRADC1Q9BSG0 188 aa12.3□□□□□ -0.44
FXN-201ENST00000377270 CUL9Q8IWT3 2517 aa12.3□□□□□ -0.44
FXN-201ENST00000377270 PCNX1Q96RV3 2341 aa12.3□□□□□ -0.44
FXN-201ENST00000377270 BSNQ9UPA5 3926 aa12.29□□□□□ -0.44
FXN-201ENST00000377270 TRGV8A0A0C4DH27 118 aa12.29□□□□□ -0.44
FXN-201ENST00000377270 LGALS9BQ3B8N2 356 aa12.29□□□□□ -0.44
FXN-201ENST00000377270 LGALS9CQ6DKI2 356 aa12.29□□□□□ -0.44
FXN-201ENST00000377270 NUP37Q8NFH4 326 aa12.29□□□□□ -0.44
FXN-201ENST00000377270 DLX4Q92988 240 aaPredicted RBP12.29□□□□□ -0.44
FXN-201ENST00000377270 TCF19Q9Y242 345 aa12.29□□□□□ -0.44
FXN-201ENST00000377270 A0A1W2PPI3 338 aa12.29□□□□□ -0.44
FXN-201ENST00000377270 ZCCHC24Q8N2G6 241 aaKnown RBP12.29□□□□□ -0.44
FXN-201ENST00000377270 CHCHD5Q9BSY4 110 aa12.29□□□□□ -0.44
FXN-201ENST00000377270 AP5S1Q9NUS5 200 aa12.29□□□□□ -0.44
FXN-201ENST00000377270 GFRALQ6UXV0 394 aa12.28□□□□□ -0.44
FXN-201ENST00000377270 OR1L4Q8NGR5 311 aa12.28□□□□□ -0.44
FXN-201ENST00000377270 OOSP1A8MZH6 123 aa12.28□□□□□ -0.44
FXN-201ENST00000377270 DSCAML1Q8TD84 2053 aa12.28□□□□□ -0.44
FXN-201ENST00000377270 IGLC6P0CF74 106 aa12.27□□□□□ -0.44
FXN-201ENST00000377270 Q8NA96 180 aa12.27□□□□□ -0.44
FXN-201ENST00000377270 AMMECR1Q9Y4X0 333 aaPredicted RBP12.27□□□□□ -0.44
FXN-201ENST00000377270 RAI1Q7Z5J4 1906 aaPredicted RBP12.27□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 81.1 ms