RNA–Protein interactions for RNA: ENST00000376724.6

TRIM40-206, Transcript of tripartite motif containing 40, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TRIM40, Length 2,006 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-206ENST00000376724 PYGO2Q9BRQ0 406 aa9.95□□□□□ -0.82
TRIM40-206ENST00000376724 NPFFR1Q9GZQ6 430 aa9.95□□□□□ -0.82
TRIM40-206ENST00000376724 ZNF320A2RRD8 509 aa9.94□□□□□ -0.82
TRIM40-206ENST00000376724 GGCTO75223 188 aaKnown RBP9.94□□□□□ -0.82
TRIM40-206ENST00000376724 IGHG4P01861 327 aa9.94□□□□□ -0.82
TRIM40-206ENST00000376724 ZNF25P17030 456 aaPredicted RBP9.94□□□□□ -0.82
TRIM40-206ENST00000376724 PRNTQ86SH4 94 aa9.94□□□□□ -0.82
TRIM40-206ENST00000376724 ASCL2Q99929 193 aa9.94□□□□□ -0.82
TRIM40-206ENST00000376724 SNHG12Q9BXW3 62 aa9.94□□□□□ -0.82
TRIM40-206ENST00000376724 ZNF702PQ9H963 129 aa9.94□□□□□ -0.82
TRIM40-206ENST00000376724 IL36BQ9NZH7 164 aa9.94□□□□□ -0.82
TRIM40-206ENST00000376724 ITPR2Q14571 2701 aa9.94□□□□□ -0.82
TRIM40-206ENST00000376724 ZNF705GA8MUZ8 300 aaPredicted RBP9.94□□□□□ -0.82
TRIM40-206ENST00000376724 M0R143 59 aa9.94□□□□□ -0.82
TRIM40-206ENST00000376724 AMBPP02760 352 aa9.94□□□□□ -0.82
TRIM40-206ENST00000376724 PSMB8P28062 276 aa9.94□□□□□ -0.82
TRIM40-206ENST00000376724 PSG9Q00887 426 aa9.94□□□□□ -0.82
TRIM40-206ENST00000376724 FOXL1Q12952 345 aa9.94□□□□□ -0.82
TRIM40-206ENST00000376724 RPEL1Q2QD12 228 aa9.94□□□□□ -0.82
TRIM40-206ENST00000376724 IMMP2LQ96T52 175 aa9.94□□□□□ -0.82
TRIM40-206ENST00000376724 YAE1D1Q9NRH1 226 aa9.94□□□□□ -0.82
TRIM40-206ENST00000376724 OSTCQ9NRP0 149 aa9.94□□□□□ -0.82
TRIM40-206ENST00000376724 FLNAP21333 2647 aaKnown RBP9.93□□□□□ -0.82
TRIM40-206ENST00000376724 TLN2Q9Y4G6 2542 aa9.93□□□□□ -0.82
TRIM40-206ENST00000376724 UNC79Q9P2D8 2635 aa9.93□□□□□ -0.82
TRIM40-206ENST00000376724 DIRC3C9JPN6 131 aa9.93□□□□□ -0.82
TRIM40-206ENST00000376724 CA1P00915 261 aaPredicted RBP9.93□□□□□ -0.82
TRIM40-206ENST00000376724 LTAP01374 205 aa9.93□□□□□ -0.82
TRIM40-206ENST00000376724 GAGE1Q13065 139 aa9.93□□□□□ -0.82
TRIM40-206ENST00000376724 ZNF580Q9UK33 172 aa9.93□□□□□ -0.82
TRIM40-206ENST00000376724 GOLT1BQ9Y3E0 138 aa9.93□□□□□ -0.82
TRIM40-206ENST00000376724 K7EQM0 130 aa9.92□□□□□ -0.82
TRIM40-206ENST00000376724 NDUFA4O00483 81 aa9.92□□□□□ -0.82
TRIM40-206ENST00000376724 DLEU1O43261 78 aa9.92□□□□□ -0.82
TRIM40-206ENST00000376724 IGLV2-11P01706 119 aa9.92□□□□□ -0.82
TRIM40-206ENST00000376724 RPLP1P05386 114 aaKnown RBP9.92□□□□□ -0.82
TRIM40-206ENST00000376724 HLA-DMBP28068 263 aa9.92□□□□□ -0.82
TRIM40-206ENST00000376724 CSN1S1P47710 185 aa9.92□□□□□ -0.82
TRIM40-206ENST00000376724 TCL1AP56279 114 aa9.92□□□□□ -0.82
TRIM40-206ENST00000376724 Q71RC1 249 aaPredicted RBP9.92□□□□□ -0.82
TRIM40-206ENST00000376724 Q86TA4 180 aa9.92□□□□□ -0.82
TRIM40-206ENST00000376724 SRD5A3Q9H8P0 318 aa9.92□□□□□ -0.82
TRIM40-206ENST00000376724 SLC35B1P78383 322 aa9.92□□□□□ -0.82
TRIM40-206ENST00000376724 KRTAP1-1Q07627 177 aa9.92□□□□□ -0.82
TRIM40-206ENST00000376724 TEX29Q8N6K0 151 aa9.92□□□□□ -0.82
TRIM40-206ENST00000376724 NUDT10Q8NFP7 164 aa9.92□□□□□ -0.82
TRIM40-206ENST00000376724 NUDT11Q96G61 164 aa9.92□□□□□ -0.82
TRIM40-206ENST00000376724 PEF1Q9UBV8 284 aaKnown RBP9.92□□□□□ -0.82
TRIM40-206ENST00000376724 ZNF705FA8MVS1 300 aaPredicted RBP9.91□□□□□ -0.82
TRIM40-206ENST00000376724 SPINK4O60575 86 aa9.91□□□□□ -0.82
TRIM40-206ENST00000376724 LINC00614P0C842 121 aa9.91□□□□□ -0.82
TRIM40-206ENST00000376724 PSG3Q16557 428 aa9.91□□□□□ -0.82
TRIM40-206ENST00000376724 COA6Q5JTJ3 125 aaKnown RBP9.91□□□□□ -0.82
TRIM40-206ENST00000376724 C1orf194Q5T5A4 169 aa9.91□□□□□ -0.82
TRIM40-206ENST00000376724 MLST8Q9BVC4 326 aa9.91□□□□□ -0.82
TRIM40-206ENST00000376724 IGKV2-40A0A087WW87 121 aaPredicted RBP9.9□□□□□ -0.82
TRIM40-206ENST00000376724 CD5LO43866 347 aa9.9□□□□□ -0.82
TRIM40-206ENST00000376724 IGKV2D-40P01614 121 aaPredicted RBP9.9□□□□□ -0.82
TRIM40-206ENST00000376724 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.9□□□□□ -0.82
TRIM40-206ENST00000376724 LINC00322Q6ZN03 302 aaPredicted RBP9.9□□□□□ -0.82
TRIM40-206ENST00000376724 RNF182Q8N6D2 247 aa9.9□□□□□ -0.82
TRIM40-206ENST00000376724 TMEM75Q8N9X5 138 aa9.9□□□□□ -0.82
TRIM40-206ENST00000376724 ZNF331Q9NQX6 463 aaPredicted RBP9.9□□□□□ -0.82
TRIM40-206ENST00000376724 PSG8Q9UQ74 426 aa9.9□□□□□ -0.82
TRIM40-206ENST00000376724 U3KQE9 123 aa9.9□□□□□ -0.82
TRIM40-206ENST00000376724 HECTD1Q9ULT8 2610 aa9.9□□□□□ -0.82
TRIM40-206ENST00000376724 SONP18583 2426 aaKnown RBP9.9□□□□□ -0.82
TRIM40-206ENST00000376724 SMIM12Q96EX1 92 aa9.9□□□□□ -0.82
TRIM40-206ENST00000376724 TMEM208Q9BTX3 173 aa9.9□□□□□ -0.82
TRIM40-206ENST00000376724 AKAP9Q99996 3911 aa9.89□□□□□ -0.83
TRIM40-206ENST00000376724 CHEK1O14757 476 aa9.89□□□□□ -0.83
TRIM40-206ENST00000376724 ZNF253O75346 499 aa9.89□□□□□ -0.83
TRIM40-206ENST00000376724 TYMSP04818 313 aa9.89□□□□□ -0.83
TRIM40-206ENST00000376724 TM4SF20Q53R12 229 aa9.89□□□□□ -0.83
TRIM40-206ENST00000376724 FAM231DQ6ZW35 169 aa9.89□□□□□ -0.83
TRIM40-206ENST00000376724 SELENOKQ9Y6D0 94 aa9.89□□□□□ -0.83
TRIM40-206ENST00000376724 FASNP49327 2511 aaKnown RBP9.89□□□□□ -0.83
TRIM40-206ENST00000376724 A0A087X0K7 114 aa9.89□□□□□ -0.83
TRIM40-206ENST00000376724 C16orf54Q6UWD8 224 aa9.89□□□□□ -0.83
TRIM40-206ENST00000376724 MRPL52Q86TS9 123 aaKnown RBP9.89□□□□□ -0.83
TRIM40-206ENST00000376724 TMEM190Q8WZ59 177 aa9.89□□□□□ -0.83
TRIM40-206ENST00000376724 DAZAP1Q96EP5 407 aaKnown RBP9.89□□□□□ -0.83
TRIM40-206ENST00000376724 BTF3L4Q96K17 158 aa9.89□□□□□ -0.83
TRIM40-206ENST00000376724 TMEM89A2RUT3 159 aa9.88□□□□□ -0.83
TRIM40-206ENST00000376724 FAM181BA6NEQ2 426 aa9.88□□□□□ -0.83
TRIM40-206ENST00000376724 DNAJC9-AS1A6NH13 148 aa9.88□□□□□ -0.83
TRIM40-206ENST00000376724 FRMD6-AS1P0C7T7 363 aa9.88□□□□□ -0.83
TRIM40-206ENST00000376724 FOXE3Q13461 319 aa9.88□□□□□ -0.83
TRIM40-206ENST00000376724 LCN12Q6JVE5 192 aa9.88□□□□□ -0.83
TRIM40-206ENST00000376724 GRAMD2BQ96HH9 432 aa9.88□□□□□ -0.83
TRIM40-206ENST00000376724 TRAPPC1Q9Y5R8 145 aa9.88□□□□□ -0.83
TRIM40-206ENST00000376724 SMIM27A0A1W2PRY6 76 aa9.87□□□□□ -0.83
TRIM40-206ENST00000376724 P01737 135 aa9.87□□□□□ -0.83
TRIM40-206ENST00000376724 RPL11P62913 178 aaKnown RBP9.87□□□□□ -0.83
TRIM40-206ENST00000376724 IQCJQ1A5X6 159 aa9.87□□□□□ -0.83
TRIM40-206ENST00000376724 FAM106AQ4KMX7 169 aa9.87□□□□□ -0.83
TRIM40-206ENST00000376724 C8orf86Q6ZUL3 223 aa9.87□□□□□ -0.83
TRIM40-206ENST00000376724 GBGT1Q8N5D6 347 aa9.87□□□□□ -0.83
TRIM40-206ENST00000376724 GLMPQ8WWB7 406 aa9.87□□□□□ -0.83
TRIM40-206ENST00000376724 ZC2HC1AQ96GY0 325 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms