RNA–Protein interactions for RNA: ENST00000376568.7

DDR1-225, Transcript of discoidin domain receptor tyrosine kinase 1, human

APPRIS ALT2 TSL 1 (best) BASIC

Gene DDR1, Length 3,894 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDR1-225	ENST00000376568	FAM159A	Q6UWV7	190 aa		10.52	□□□□□ -0.72
DDR1-225	ENST00000376568	CFHR3	Q02985	330 aa		10.52	□□□□□ -0.73
DDR1-225	ENST00000376568	IMMP2L	Q96T52	175 aa		10.52	□□□□□ -0.73
DDR1-225	ENST00000376568	PHLDA3	Q9Y5J5	127 aa		10.52	□□□□□ -0.73
DDR1-225	ENST00000376568	IGKV3OR2-268	A0A0C4DH90	116 aa		10.52	□□□□□ -0.73
DDR1-225	ENST00000376568	LY6L	H3BQJ8	138 aa		10.52	□□□□□ -0.73
DDR1-225	ENST00000376568	LCN12	Q6JVE5	192 aa		10.52	□□□□□ -0.73
DDR1-225	ENST00000376568	NPB	Q8NG41	125 aa		10.52	□□□□□ -0.73
DDR1-225	ENST00000376568		I3L2K1	104 aa		10.51	□□□□□ -0.73
DDR1-225	ENST00000376568	EDN2	P20800	178 aa		10.51	□□□□□ -0.73
DDR1-225	ENST00000376568	ADM	P35318	185 aa		10.51	□□□□□ -0.73
DDR1-225	ENST00000376568	PRSS57	Q6UWY2	283 aa		10.51	□□□□□ -0.73
DDR1-225	ENST00000376568		Q6YL49	198 aa		10.51	□□□□□ -0.73
DDR1-225	ENST00000376568	IGLV11-55	A0A075B6I3	123 aa		10.51	□□□□□ -0.73
DDR1-225	ENST00000376568	IGHG2	P01859	326 aa		10.51	□□□□□ -0.73
DDR1-225	ENST00000376568	RRN3P1	Q2M238	152 aa		10.51	□□□□□ -0.73
DDR1-225	ENST00000376568	SPSB3	Q6PJ21	355 aa		10.51	□□□□□ -0.73
DDR1-225	ENST00000376568	TTC9C	Q8N5M4	171 aa		10.51	□□□□□ -0.73
DDR1-225	ENST00000376568	SSBP4	Q9BWG4	385 aa	Predicted RBP	10.51	□□□□□ -0.73
DDR1-225	ENST00000376568	PSG8	Q9UQ74	426 aa		10.51	□□□□□ -0.73
DDR1-225	ENST00000376568	TOMM40	O96008	361 aa		10.51	□□□□□ -0.73
DDR1-225	ENST00000376568	PSG9	Q00887	426 aa		10.51	□□□□□ -0.73
DDR1-225	ENST00000376568	TMEM183B	Q1AE95	376 aa		10.51	□□□□□ -0.73
DDR1-225	ENST00000376568	TMEM183A	Q8IXX5	376 aa		10.51	□□□□□ -0.73
DDR1-225	ENST00000376568	LINC00518	Q8N0U6	118 aa		10.51	□□□□□ -0.73
DDR1-225	ENST00000376568	C8orf31	Q8N9H6	132 aa		10.51	□□□□□ -0.73
DDR1-225	ENST00000376568	KLK9	Q9UKQ9	250 aa		10.51	□□□□□ -0.73
DDR1-225	ENST00000376568	FAM223B	A6NKX1	122 aa		10.5	□□□□□ -0.73
DDR1-225	ENST00000376568	VWC2L	B2RUY7	222 aa		10.5	□□□□□ -0.73
DDR1-225	ENST00000376568	RNASEK	Q6P5S7	137 aa	Known RBP	10.5	□□□□□ -0.73
DDR1-225	ENST00000376568	UQCC3	Q6UW78	93 aa		10.5	□□□□□ -0.73
DDR1-225	ENST00000376568	FAM223A	Q8IWN6	122 aa		10.5	□□□□□ -0.73
DDR1-225	ENST00000376568	KIRREL3-AS3	Q8N7Y1	241 aa	Predicted RBP	10.5	□□□□□ -0.73
DDR1-225	ENST00000376568	SVEP1	Q4LDE5	3571 aa		10.5	□□□□□ -0.73
DDR1-225	ENST00000376568	CUBN	O60494	3623 aa		10.5	□□□□□ -0.73
DDR1-225	ENST00000376568	DMRTA1	Q5VZB9	504 aa		10.5	□□□□□ -0.73
DDR1-225	ENST00000376568	NSD1	Q96L73	2696 aa	Predicted RBP	10.5	□□□□□ -0.73
DDR1-225	ENST00000376568	PATE2	Q6UY27	113 aa		10.5	□□□□□ -0.73
DDR1-225	ENST00000376568	DLX4	Q92988	240 aa	Predicted RBP	10.5	□□□□□ -0.73
DDR1-225	ENST00000376568	SEC11C	Q9BY50	192 aa		10.5	□□□□□ -0.73
DDR1-225	ENST00000376568	LINC00574	Q9H8X3	128 aa		10.5	□□□□□ -0.73
DDR1-225	ENST00000376568	CBLN1	P23435	193 aa		10.49	□□□□□ -0.73
DDR1-225	ENST00000376568	NBEAL2	Q6ZNJ1	2754 aa		10.49	□□□□□ -0.73
DDR1-225	ENST00000376568	NDUFA3	O95167	84 aa		10.49	□□□□□ -0.73
DDR1-225	ENST00000376568	ZNF124	Q15973	351 aa		10.49	□□□□□ -0.73
DDR1-225	ENST00000376568	G0S2	P27469	103 aa		10.49	□□□□□ -0.73
DDR1-225	ENST00000376568	GTSCR1	Q86UQ5	136 aa		10.49	□□□□□ -0.73
DDR1-225	ENST00000376568	LINC01006	Q8NI28	216 aa		10.49	□□□□□ -0.73
DDR1-225	ENST00000376568	DEFB4A	O15263	64 aa		10.48	□□□□□ -0.73
DDR1-225	ENST00000376568	ZNF506	Q5JVG8	444 aa		10.48	□□□□□ -0.73
DDR1-225	ENST00000376568	SHANK2-AS3	Q9BTD1	123 aa		10.48	□□□□□ -0.73
DDR1-225	ENST00000376568	C19orf24	Q9BVV8	132 aa		10.48	□□□□□ -0.73
DDR1-225	ENST00000376568	NRN1	Q9NPD7	142 aa		10.48	□□□□□ -0.73
DDR1-225	ENST00000376568	GGTLC3	B5MD39	225 aa		10.48	□□□□□ -0.73
DDR1-225	ENST00000376568	ZNF586	Q9NXT0	402 aa		10.48	□□□□□ -0.73
DDR1-225	ENST00000376568	ELANE	P08246	267 aa		10.48	□□□□□ -0.73
DDR1-225	ENST00000376568	DPPA3	Q6W0C5	159 aa		10.48	□□□□□ -0.73
DDR1-225	ENST00000376568	OR11H12	B2RN74	326 aa		10.47	□□□□□ -0.73
DDR1-225	ENST00000376568	DEFB130B	P0DP73	79 aa		10.47	□□□□□ -0.73
DDR1-225	ENST00000376568	DEFB130A	P0DP74	79 aa		10.47	□□□□□ -0.73
DDR1-225	ENST00000376568	ZNF502	Q8TBZ5	544 aa		10.47	□□□□□ -0.73
DDR1-225	ENST00000376568	VGLL1	Q99990	258 aa		10.47	□□□□□ -0.73
DDR1-225	ENST00000376568	OR4C46	A6NHA9	309 aa		10.47	□□□□□ -0.73
DDR1-225	ENST00000376568		H3BVH4	76 aa		10.47	□□□□□ -0.73
DDR1-225	ENST00000376568	PRSS3P2	Q8NHM4	247 aa		10.47	□□□□□ -0.73
DDR1-225	ENST00000376568	CCDC140	Q96MF4	163 aa		10.47	□□□□□ -0.73
DDR1-225	ENST00000376568	TRGC2	P03986	189 aa		10.47	□□□□□ -0.73
DDR1-225	ENST00000376568	RPL23	P62829	140 aa	Known RBP	10.47	□□□□□ -0.73
DDR1-225	ENST00000376568	EIF4EBP1	Q13541	118 aa	Predicted RBP	10.47	□□□□□ -0.73
DDR1-225	ENST00000376568	C8orf49	Q96NF6	230 aa		10.47	□□□□□ -0.73
DDR1-225	ENST00000376568	MEGF9	Q9H1U4	602 aa		10.47	□□□□□ -0.73
DDR1-225	ENST00000376568	ESM1	Q9NQ30	184 aa		10.47	□□□□□ -0.73
DDR1-225	ENST00000376568	CELSR1	Q9NYQ6	3014 aa		10.47	□□□□□ -0.73
DDR1-225	ENST00000376568	ZNF253	O75346	499 aa		10.46	□□□□□ -0.73
DDR1-225	ENST00000376568	NDUFS6	O75380	124 aa	Known RBP	10.46	□□□□□ -0.73
DDR1-225	ENST00000376568	TCRA	P04437	139 aa		10.46	□□□□□ -0.73
DDR1-225	ENST00000376568	VN1R17P	Q8TDU5	208 aa		10.46	□□□□□ -0.73
DDR1-225	ENST00000376568	SLC25A2	Q9BXI2	301 aa		10.46	□□□□□ -0.73
DDR1-225	ENST00000376568	TRGV2	A0A075B6R0	118 aa		10.46	□□□□□ -0.73
DDR1-225	ENST00000376568		B4DEV8	164 aa		10.46	□□□□□ -0.73
DDR1-225	ENST00000376568	SFRP2	Q96HF1	295 aa		10.46	□□□□□ -0.73
DDR1-225	ENST00000376568	GPR82	Q96P67	336 aa		10.46	□□□□□ -0.73
DDR1-225	ENST00000376568	CLPSL1	A2RUU4	121 aa		10.46	□□□□□ -0.74
DDR1-225	ENST00000376568		A8MWL6	223 aa		10.46	□□□□□ -0.74
DDR1-225	ENST00000376568	HSBP1	O75506	76 aa		10.46	□□□□□ -0.74
DDR1-225	ENST00000376568	NUTF2	P61970	127 aa	Known RBP	10.46	□□□□□ -0.74
DDR1-225	ENST00000376568	ATG101	Q9BSB4	218 aa		10.46	□□□□□ -0.74
DDR1-225	ENST00000376568	TSSC4	Q9Y5U2	329 aa	Predicted RBP	10.46	□□□□□ -0.74
DDR1-225	ENST00000376568	SCGB1D1	O95968	90 aa		10.45	□□□□□ -0.74
DDR1-225	ENST00000376568	ZNF56	Q15929	161 aa		10.45	□□□□□ -0.74
DDR1-225	ENST00000376568	LURAP1L	Q8IV03	231 aa		10.45	□□□□□ -0.74
DDR1-225	ENST00000376568	ZNF114	Q8NC26	417 aa		10.45	□□□□□ -0.74
DDR1-225	ENST00000376568	NIT2	Q9NQR4	276 aa		10.45	□□□□□ -0.74
DDR1-225	ENST00000376568	CSMD1	Q96PZ7	3565 aa		10.45	□□□□□ -0.74
DDR1-225	ENST00000376568	PAX2	Q02962	417 aa		10.45	□□□□□ -0.74
DDR1-225	ENST00000376568	TMEM61	Q8N0U2	210 aa		10.45	□□□□□ -0.74
DDR1-225	ENST00000376568	OTOR	Q9NRC9	128 aa		10.45	□□□□□ -0.74
DDR1-225	ENST00000376568	ARL2-SNX15	V9GYD0	113 aa		10.45	□□□□□ -0.74
DDR1-225	ENST00000376568	TENM4	Q6N022	2769 aa		10.45	□□□□□ -0.74
DDR1-225	ENST00000376568	LGALS1	P09382	135 aa	Known RBP	10.45	□□□□□ -0.74

Retrieved 100 of 20,778 RNA–protein pairs in 109.5 ms