RNA–Protein interactions for RNA: ENST00000376491.7

CLCN6-204, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 1 (best)

Gene CLCN6, Length 927 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-204ENST00000376491 J3KRW8 73 aa10.34□□□□□ -0.75
CLCN6-204ENST00000376491 GAGE7O76087 117 aa10.34□□□□□ -0.75
CLCN6-204ENST00000376491 MBPP02686 304 aaPredicted RBP10.34□□□□□ -0.75
CLCN6-204ENST00000376491 GAGE12FP0CL80 117 aa10.34□□□□□ -0.75
CLCN6-204ENST00000376491 GAGE12GP0CL81 117 aa10.34□□□□□ -0.75
CLCN6-204ENST00000376491 GAGE12IP0CL82 117 aa10.34□□□□□ -0.75
CLCN6-204ENST00000376491 CT45A10P0DMU9 189 aa10.34□□□□□ -0.75
CLCN6-204ENST00000376491 M6PRP20645 277 aa10.34□□□□□ -0.75
CLCN6-204ENST00000376491 ESRGQ1W209 222 aa10.34□□□□□ -0.75
CLCN6-204ENST00000376491 SPANXN2Q5MJ10 180 aa10.34□□□□□ -0.75
CLCN6-204ENST00000376491 ZNF503Q96F45 646 aa10.34□□□□□ -0.75
CLCN6-204ENST00000376491 RBM38Q9H0Z9 239 aaKnown RBP10.34□□□□□ -0.75
CLCN6-204ENST00000376491 TRAV5A0A0B4J249 113 aa10.33□□□□□ -0.76
CLCN6-204ENST00000376491 COX7A2P2O60397 106 aa10.33□□□□□ -0.76
CLCN6-204ENST00000376491 INPP1P49441 399 aa10.33□□□□□ -0.76
CLCN6-204ENST00000376491 TRIQKQ629K1 86 aa10.33□□□□□ -0.76
CLCN6-204ENST00000376491 CCDC28AQ8IWP9 274 aa10.33□□□□□ -0.76
CLCN6-204ENST00000376491 ZNF431Q8TF32 576 aaPredicted RBP10.33□□□□□ -0.76
CLCN6-204ENST00000376491 MITD1Q8WV92 249 aa10.33□□□□□ -0.76
CLCN6-204ENST00000376491 UPK3BQ9BT76 320 aa10.33□□□□□ -0.76
CLCN6-204ENST00000376491 GGACTQ9BVM4 153 aa10.33□□□□□ -0.76
CLCN6-204ENST00000376491 TRAV12-3A0A0B4J271 114 aa10.32□□□□□ -0.76
CLCN6-204ENST00000376491 RLN2P04090 185 aa10.32□□□□□ -0.76
CLCN6-204ENST00000376491 KRTAP10-2P60368 255 aa10.32□□□□□ -0.76
CLCN6-204ENST00000376491 C10orf113Q5VZT2 155 aa10.32□□□□□ -0.76
CLCN6-204ENST00000376491 Q9H3A6 140 aa10.32□□□□□ -0.76
CLCN6-204ENST00000376491 PXMP4Q9Y6I8 212 aa10.32□□□□□ -0.76
CLCN6-204ENST00000376491 SNURFLB1AK76 121 aa10.31□□□□□ -0.76
CLCN6-204ENST00000376491 NPIPB6E9PJ23 425 aa10.31□□□□□ -0.76
CLCN6-204ENST00000376491 H3BNG1 76 aa10.31□□□□□ -0.76
CLCN6-204ENST00000376491 CCSO14618 274 aa10.31□□□□□ -0.76
CLCN6-204ENST00000376491 TTC32Q5I0X7 151 aa10.31□□□□□ -0.76
CLCN6-204ENST00000376491 MIC13Q5XKP0 118 aa10.31□□□□□ -0.76
CLCN6-204ENST00000376491 Q6ZTI0 123 aa10.31□□□□□ -0.76
CLCN6-204ENST00000376491 NRARPQ7Z6K4 114 aa10.31□□□□□ -0.76
CLCN6-204ENST00000376491 Q8N1X5 172 aa10.31□□□□□ -0.76
CLCN6-204ENST00000376491 ODF3Q96PU9 254 aa10.31□□□□□ -0.76
CLCN6-204ENST00000376491 TMPRSS5Q9H3S3 457 aa10.31□□□□□ -0.76
CLCN6-204ENST00000376491 C11orf1Q9H5F2 150 aa10.31□□□□□ -0.76
CLCN6-204ENST00000376491 DNAJC4Q9NNZ3 241 aa10.31□□□□□ -0.76
CLCN6-204ENST00000376491 ZNF586Q9NXT0 402 aa10.31□□□□□ -0.76
CLCN6-204ENST00000376491 MRPS16Q9Y3D3 137 aaKnown RBP10.31□□□□□ -0.76
CLCN6-204ENST00000376491 LEPP41159 167 aa10.3□□□□□ -0.76
CLCN6-204ENST00000376491 CAMLGP49069 296 aa10.3□□□□□ -0.76
CLCN6-204ENST00000376491 DAZ2Q13117 558 aaKnown RBP10.3□□□□□ -0.76
CLCN6-204ENST00000376491 VSIG2Q96IQ7 327 aa10.3□□□□□ -0.76
CLCN6-204ENST00000376491 PYGO2Q9BRQ0 406 aa10.3□□□□□ -0.76
CLCN6-204ENST00000376491 A0A1W2PPQ1 181 aa10.29□□□□□ -0.76
CLCN6-204ENST00000376491 FAM24AA6NFZ4 105 aa10.29□□□□□ -0.76
CLCN6-204ENST00000376491 M0R3E3 92 aa10.29□□□□□ -0.76
CLCN6-204ENST00000376491 CST7O76096 145 aa10.29□□□□□ -0.76
CLCN6-204ENST00000376491 BTF3P20290 206 aaKnown RBP10.29□□□□□ -0.76
CLCN6-204ENST00000376491 Q6ZRG5 221 aa10.29□□□□□ -0.76
CLCN6-204ENST00000376491 C11orf72Q8NBR9 251 aa10.29□□□□□ -0.76
CLCN6-204ENST00000376491 WDR83OSQ9Y284 106 aa10.29□□□□□ -0.76
CLCN6-204ENST00000376491 LSM5Q9Y4Y9 91 aaKnown RBP10.29□□□□□ -0.76
CLCN6-204ENST00000376491 A0A096LPF7 62 aa10.28□□□□□ -0.76
CLCN6-204ENST00000376491 CENPXA8MT69 81 aa10.28□□□□□ -0.76
CLCN6-204ENST00000376491 L7N2F9 121 aa10.28□□□□□ -0.76
CLCN6-204ENST00000376491 ZNF253O75346 499 aa10.28□□□□□ -0.76
CLCN6-204ENST00000376491 IL7P13232 177 aa10.28□□□□□ -0.76
CLCN6-204ENST00000376491 BCAP31P51572 246 aa10.28□□□□□ -0.76
CLCN6-204ENST00000376491 VAMP2P63027 116 aa10.28□□□□□ -0.76
CLCN6-204ENST00000376491 ERCC8Q13216 396 aa10.28□□□□□ -0.76
CLCN6-204ENST00000376491 GUK1Q16774 197 aa10.28□□□□□ -0.76
CLCN6-204ENST00000376491 SCRT2Q9NQ03 307 aa10.28□□□□□ -0.76
CLCN6-204ENST00000376491 GSN-AS1Q9NRJ2 163 aa10.28□□□□□ -0.76
CLCN6-204ENST00000376491 C7orf71A4D174 169 aa10.27□□□□□ -0.77
CLCN6-204ENST00000376491 PLA2G10O15496 165 aa10.27□□□□□ -0.77
CLCN6-204ENST00000376491 ZNF324O75467 553 aaPredicted RBP10.27□□□□□ -0.77
CLCN6-204ENST00000376491 CAV2P51636 162 aa10.27□□□□□ -0.77
CLCN6-204ENST00000376491 CD300CQ08708 224 aa10.27□□□□□ -0.77
CLCN6-204ENST00000376491 VWC2Q2TAL6 325 aa10.27□□□□□ -0.77
CLCN6-204ENST00000376491 OR1L4Q8NGR5 311 aa10.27□□□□□ -0.77
CLCN6-204ENST00000376491 FAM19A4Q96LR4 140 aa10.27□□□□□ -0.77
CLCN6-204ENST00000376491 C18orf15Q96N68 181 aa10.27□□□□□ -0.77
CLCN6-204ENST00000376491 C20orf85Q9H1P6 137 aa10.27□□□□□ -0.77
CLCN6-204ENST00000376491 SLC39A9Q9NUM3 307 aa10.27□□□□□ -0.77
CLCN6-204ENST00000376491 TRBV19A0A075B6N1 114 aa10.26□□□□□ -0.77
CLCN6-204ENST00000376491 FAM25EA8MYX2 175 aa10.26□□□□□ -0.77
CLCN6-204ENST00000376491 KLLNB2CW77 178 aa10.26□□□□□ -0.77
CLCN6-204ENST00000376491 NDUFB4O95168 129 aa10.26□□□□□ -0.77
CLCN6-204ENST00000376491 SLC25A5P05141 298 aaKnown RBP10.26□□□□□ -0.77
CLCN6-204ENST00000376491 RPL29P47914 159 aaKnown RBP10.26□□□□□ -0.77
CLCN6-204ENST00000376491 LINC00315P59091 139 aa10.26□□□□□ -0.77
CLCN6-204ENST00000376491 BTN1A1Q13410 526 aa10.26□□□□□ -0.77
CLCN6-204ENST00000376491 RAB31Q13636 194 aa10.26□□□□□ -0.77
CLCN6-204ENST00000376491 ZNF846Q147U1 533 aa10.26□□□□□ -0.77
CLCN6-204ENST00000376491 CNPY1Q3B7I2 92 aa10.26□□□□□ -0.77
CLCN6-204ENST00000376491 Q6ZRN7 208 aaPredicted RBP10.26□□□□□ -0.77
CLCN6-204ENST00000376491 MRPL53Q96EL3 112 aaKnown RBP10.26□□□□□ -0.77
CLCN6-204ENST00000376491 PFDN5Q99471 154 aa10.26□□□□□ -0.77
CLCN6-204ENST00000376491 UQCC1Q9NVA1 299 aa10.26□□□□□ -0.77
CLCN6-204ENST00000376491 TRGV2A0A075B6R0 118 aa10.25□□□□□ -0.77
CLCN6-204ENST00000376491 UBE2L5PA0A1B0GUS4 154 aa10.25□□□□□ -0.77
CLCN6-204ENST00000376491 SEC22CQ9BRL7 303 aa10.25□□□□□ -0.77
CLCN6-204ENST00000376491 LINC00467Q9BRT7 94 aa10.25□□□□□ -0.77
CLCN6-204ENST00000376491 AGPAT4-IT1Q9H0P7 198 aa10.25□□□□□ -0.77
CLCN6-204ENST00000376491 FUT9Q9Y231 359 aa10.25□□□□□ -0.77
CLCN6-204ENST00000376491 KLF12Q9Y4X4 402 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms