RNA–Protein interactions for RNA: ENST00000376228.9

HLA-C-201, Transcript of major histocompatibility complex, class I, C, humanhuman

APPRIS P2 BASIC

Gene HLA-C, Length 1,536 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-201ENST00000376228 MGAM2Q2M2H8 2515 aa16.11■□□□□ 0.17
HLA-C-201ENST00000376228 PFN1P07737 140 aaKnown RBP16.11■□□□□ 0.17
HLA-C-201ENST00000376228 FOLR2P14207 255 aa16.11■□□□□ 0.17
HLA-C-201ENST00000376228 BAGE2Q86Y30 109 aa16.11■□□□□ 0.17
HLA-C-201ENST00000376228 WIPF2Q8TF74 440 aaPredicted RBP16.11■□□□□ 0.17
HLA-C-201ENST00000376228 SLC50A1Q9BRV3 221 aa16.11■□□□□ 0.17
HLA-C-201ENST00000376228 ZNF331Q9NQX6 463 aaPredicted RBP16.11■□□□□ 0.17
HLA-C-201ENST00000376228 AURKAIP1Q9NWT8 199 aaPredicted RBP16.11■□□□□ 0.17
HLA-C-201ENST00000376228 ZNF785A8K8V0 405 aa16.1■□□□□ 0.17
HLA-C-201ENST00000376228 TMEM75Q8N9X5 138 aa16.1■□□□□ 0.17
HLA-C-201ENST00000376228 OR10G8Q8NGN5 311 aa16.1■□□□□ 0.17
HLA-C-201ENST00000376228 GRAMD2BQ96HH9 432 aa16.1■□□□□ 0.17
HLA-C-201ENST00000376228 OSTCQ9NRP0 149 aa16.1■□□□□ 0.17
HLA-C-201ENST00000376228 DIRC3C9JPN6 131 aa16.09■□□□□ 0.17
HLA-C-201ENST00000376228 K7EQM0 130 aa16.09■□□□□ 0.17
HLA-C-201ENST00000376228 ZNF207O43670 478 aaKnown RBP16.09■□□□□ 0.17
HLA-C-201ENST00000376228 LTAP01374 205 aa16.09■□□□□ 0.17
HLA-C-201ENST00000376228 CDX1P47902 265 aaPredicted RBP16.09■□□□□ 0.17
HLA-C-201ENST00000376228 NSUN5P1Q3KNT7 163 aa16.09■□□□□ 0.17
HLA-C-201ENST00000376228 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa16.09■□□□□ 0.17
HLA-C-201ENST00000376228 MLST8Q9BVC4 326 aa16.09■□□□□ 0.17
HLA-C-201ENST00000376228 DAZ1Q9NQZ3 744 aaKnown RBP16.09■□□□□ 0.17
HLA-C-201ENST00000376228 CLEC5AQ9NY25 188 aa16.09■□□□□ 0.17
HLA-C-201ENST00000376228 TRBV24-1A0A075B6N3 115 aa16.09■□□□□ 0.17
HLA-C-201ENST00000376228 TRAV34A0A0B4J273 112 aa16.09■□□□□ 0.17
HLA-C-201ENST00000376228 FBLL1A6NHQ2 334 aaKnown RBP16.09■□□□□ 0.17
HLA-C-201ENST00000376228 CSN1S1P47710 185 aa16.09■□□□□ 0.17
HLA-C-201ENST00000376228 OR5B12Q96R08 314 aa16.09■□□□□ 0.17
HLA-C-201ENST00000376228 CITED2Q99967 270 aaPredicted RBP16.09■□□□□ 0.17
HLA-C-201ENST00000376228 PYGO2Q9BRQ0 406 aa16.09■□□□□ 0.17
HLA-C-201ENST00000376228 TMA7Q9Y2S6 64 aaKnown RBP16.09■□□□□ 0.17
HLA-C-201ENST00000376228 IGHV7-4-1A0A0J9YVY3 117 aa16.08■□□□□ 0.16
HLA-C-201ENST00000376228 LGALS9O00182 355 aa16.08■□□□□ 0.16
HLA-C-201ENST00000376228 IGLV2-11P01706 119 aa16.08■□□□□ 0.16
HLA-C-201ENST00000376228 FAM231DQ6ZW35 169 aa16.08■□□□□ 0.16
HLA-C-201ENST00000376228 REC114Q7Z4M0 266 aa16.08■□□□□ 0.16
HLA-C-201ENST00000376228 UFC1Q9Y3C8 167 aa16.08■□□□□ 0.16
HLA-C-201ENST00000376228 RAB5AP20339 215 aa16.07■□□□□ 0.16
HLA-C-201ENST00000376228 S100PP25815 95 aa16.07■□□□□ 0.16
HLA-C-201ENST00000376228 RPEL1Q2QD12 228 aa16.07■□□□□ 0.16
HLA-C-201ENST00000376228 GOLT1AQ6ZVE7 132 aa16.07■□□□□ 0.16
HLA-C-201ENST00000376228 MRPL53Q96EL3 112 aaKnown RBP16.07■□□□□ 0.16
HLA-C-201ENST00000376228 BIN3Q9NQY0 253 aa16.07■□□□□ 0.16
HLA-C-201ENST00000376228 SMPXQ9UHP9 88 aa16.07■□□□□ 0.16
HLA-C-201ENST00000376228 RPH3ALQ9UNE2 315 aa16.07■□□□□ 0.16
HLA-C-201ENST00000376228 ZNF320A2RRD8 509 aa16.06■□□□□ 0.16
HLA-C-201ENST00000376228 A8MWP6 167 aa16.06■□□□□ 0.16
HLA-C-201ENST00000376228 ZFP30Q9Y2G7 519 aa16.06■□□□□ 0.16
HLA-C-201ENST00000376228 IGHV3-66A0A0C4DH42 116 aa16.05■□□□□ 0.16
HLA-C-201ENST00000376228 A0A1W2PRX2 142 aa16.05■□□□□ 0.16
HLA-C-201ENST00000376228 M0R3E3 92 aa16.05■□□□□ 0.16
HLA-C-201ENST00000376228 OR5I1Q13606 314 aa16.05■□□□□ 0.16
HLA-C-201ENST00000376228 PSG3Q16557 428 aa16.05■□□□□ 0.16
HLA-C-201ENST00000376228 Q86TA4 180 aa16.05■□□□□ 0.16
HLA-C-201ENST00000376228 URGCP-MRPS24S4R325 110 aa16.05■□□□□ 0.16
HLA-C-201ENST00000376228 IGHV3OR16-13A0A075B7E8 117 aa16.04■□□□□ 0.16
HLA-C-201ENST00000376228 IGHV3-49A0A0A0MS15 119 aa16.04■□□□□ 0.16
HLA-C-201ENST00000376228 IGHV3-74A0A0B4J1X5 117 aa16.04■□□□□ 0.16
HLA-C-201ENST00000376228 BMI1P35226 326 aa16.04■□□□□ 0.16
HLA-C-201ENST00000376228 ERVFC1-1P60608 527 aa16.04■□□□□ 0.16
HLA-C-201ENST00000376228 FLI1Q01543 452 aaPredicted RBP16.04■□□□□ 0.16
HLA-C-201ENST00000376228 TCTEX1D4Q5JR98 221 aa16.04■□□□□ 0.16
HLA-C-201ENST00000376228 KCNIP4Q6PIL6 250 aa16.04■□□□□ 0.16
HLA-C-201ENST00000376228 TMEM183AQ8IXX5 376 aa16.04■□□□□ 0.16
HLA-C-201ENST00000376228 BTF3L4Q96K17 158 aa16.04■□□□□ 0.16
HLA-C-201ENST00000376228 V9GYV3 84 aa16.04■□□□□ 0.16
HLA-C-201ENST00000376228 ADARB2-AS1A8MUL3 147 aa16.04■□□□□ 0.16
HLA-C-201ENST00000376228 CHEK1O14757 476 aa16.04■□□□□ 0.16
HLA-C-201ENST00000376228 CXCL1P09341 107 aa16.04■□□□□ 0.16
HLA-C-201ENST00000376228 MGST1P10620 155 aaKnown RBP16.04■□□□□ 0.16
HLA-C-201ENST00000376228 TM4SF20Q53R12 229 aa16.04■□□□□ 0.16
HLA-C-201ENST00000376228 C4orf3Q8WVX3 66 aa16.04■□□□□ 0.16
HLA-C-201ENST00000376228 RHPN1-AS1Q9BWJ2 59 aa16.04■□□□□ 0.16
HLA-C-201ENST00000376228 ZNF492Q9P255 531 aa16.04■□□□□ 0.16
HLA-C-201ENST00000376228 TRAV9-1A0A075B6T8 112 aa16.03■□□□□ 0.16
HLA-C-201ENST00000376228 IGHV4OR15-8A0A075B7B6 117 aa16.03■□□□□ 0.16
HLA-C-201ENST00000376228 A0A087WW49 117 aa16.03■□□□□ 0.16
HLA-C-201ENST00000376228 RBAKDNA6NC62 111 aa16.03■□□□□ 0.16
HLA-C-201ENST00000376228 IBA57Q5T440 356 aaKnown RBP16.03■□□□□ 0.16
HLA-C-201ENST00000376228 C8orf86Q6ZUL3 223 aa16.03■□□□□ 0.16
HLA-C-201ENST00000376228 NDUFA11Q86Y39 141 aa16.03■□□□□ 0.16
HLA-C-201ENST00000376228 C1QL4Q86Z23 238 aa16.03■□□□□ 0.16
HLA-C-201ENST00000376228 IL36BQ9NZH7 164 aa16.03■□□□□ 0.16
HLA-C-201ENST00000376228 PSG8Q9UQ74 426 aa16.03■□□□□ 0.16
HLA-C-201ENST00000376228 TGIF2-C20orf24A0A0A6YYL0 155 aa16.02■□□□□ 0.15
HLA-C-201ENST00000376228 KHDC1LQ5JSQ8 128 aa16.02■□□□□ 0.15
HLA-C-201ENST00000376228 LCN12Q6JVE5 192 aa16.02■□□□□ 0.15
HLA-C-201ENST00000376228 FAM210BQ96KR6 192 aa16.02■□□□□ 0.15
HLA-C-201ENST00000376228 TRAV8-1A0A0A6YYK1 113 aa16.01■□□□□ 0.15
HLA-C-201ENST00000376228 TRAV8-2A0A0B4J237 113 aa16.01■□□□□ 0.15
HLA-C-201ENST00000376228 COX8CQ7Z4L0 72 aa16.01■□□□□ 0.15
HLA-C-201ENST00000376228 SGK494Q96LW2 274 aa16.01■□□□□ 0.15
HLA-C-201ENST00000376228 MLXQ9UH92 298 aa16.01■□□□□ 0.15
HLA-C-201ENST00000376228 TMEM213A2RRL7 107 aa16■□□□□ 0.15
HLA-C-201ENST00000376228 HOXD3P31249 432 aaPredicted RBP16■□□□□ 0.15
HLA-C-201ENST00000376228 KLF5Q13887 457 aaPredicted RBP16■□□□□ 0.15
HLA-C-201ENST00000376228 NHLRC2Q8NBF2 726 aa16■□□□□ 0.15
HLA-C-201ENST00000376228 RNASE7Q9H1E1 156 aaKnown RBP16■□□□□ 0.15
HLA-C-201ENST00000376228 MEGF8Q7Z7M0 2845 aa16■□□□□ 0.15
HLA-C-201ENST00000376228 SOCS3O14543 225 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms