RNA–Protein interactions for RNA: ENST00000375755.7

MSH5-204, Transcript of mutS homolog 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MSH5, Length 3,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-204ENST00000375755 SAMD5Q5TGI4 173 aa10.23□□□□□ -0.77
MSH5-204ENST00000375755 TEX36Q5VZQ5 186 aa10.23□□□□□ -0.77
MSH5-204ENST00000375755 PRNTQ86SH4 94 aa10.23□□□□□ -0.77
MSH5-204ENST00000375755 SRSF12Q8WXF0 261 aaKnown RBP10.23□□□□□ -0.77
MSH5-204ENST00000375755 ASCL2Q99929 193 aa10.23□□□□□ -0.77
MSH5-204ENST00000375755 MRPL20Q9BYC9 149 aaKnown RBP10.23□□□□□ -0.77
MSH5-204ENST00000375755 DYNLRB1Q9NP97 96 aa10.23□□□□□ -0.77
MSH5-204ENST00000375755 TMEM178BH3BS89 294 aa10.23□□□□□ -0.77
MSH5-204ENST00000375755 SCGB2A2Q13296 93 aa10.23□□□□□ -0.77
MSH5-204ENST00000375755 SLC25A48Q6ZT89 311 aaKnown RBP10.23□□□□□ -0.77
MSH5-204ENST00000375755 IGLV2-11P01706 119 aa10.22□□□□□ -0.77
MSH5-204ENST00000375755 PRB4P10163 310 aaPredicted RBP10.22□□□□□ -0.77
MSH5-204ENST00000375755 TNFRSF1AP19438 455 aa10.22□□□□□ -0.77
MSH5-204ENST00000375755 FCGR2BP31994 310 aaPredicted RBP10.22□□□□□ -0.77
MSH5-204ENST00000375755 NMUP48645 174 aa10.22□□□□□ -0.77
MSH5-204ENST00000375755 C18orf15Q96N68 181 aa10.22□□□□□ -0.77
MSH5-204ENST00000375755 PRORYQ9H606 182 aa10.22□□□□□ -0.77
MSH5-204ENST00000375755 CTSZQ9UBR2 303 aa10.22□□□□□ -0.77
MSH5-204ENST00000375755 FLNCQ14315 2725 aa10.22□□□□□ -0.77
MSH5-204ENST00000375755 CD3EP07766 207 aa10.22□□□□□ -0.77
MSH5-204ENST00000375755 RIGQ13278 110 aa10.22□□□□□ -0.77
MSH5-204ENST00000375755 SIGMAR1Q99720 223 aa10.22□□□□□ -0.77
MSH5-204ENST00000375755 RAB9BQ9NP90 201 aa10.22□□□□□ -0.77
MSH5-204ENST00000375755 SIGLEC8Q9NYZ4 499 aa10.22□□□□□ -0.77
MSH5-204ENST00000375755 INS-IGF2F8WCM5 200 aa10.22□□□□□ -0.77
MSH5-204ENST00000375755 GOLT1AQ6ZVE7 132 aa10.22□□□□□ -0.77
MSH5-204ENST00000375755 OSR1Q8TAX0 266 aaPredicted RBP10.22□□□□□ -0.77
MSH5-204ENST00000375755 SMPXQ9UHP9 88 aa10.22□□□□□ -0.77
MSH5-204ENST00000375755 SPTAN1Q13813 2472 aaKnown RBP10.22□□□□□ -0.77
MSH5-204ENST00000375755 PLXNB1O43157 2135 aa10.21□□□□□ -0.77
MSH5-204ENST00000375755 SCGB1A1P11684 91 aa10.21□□□□□ -0.77
MSH5-204ENST00000375755 GATD1Q8NB37 220 aa10.21□□□□□ -0.77
MSH5-204ENST00000375755 RPUSD1Q9UJJ7 312 aaKnown RBP10.21□□□□□ -0.77
MSH5-204ENST00000375755 A0A1B0GV72 72 aa10.21□□□□□ -0.78
MSH5-204ENST00000375755 TMEM189A5PLL7 270 aa10.21□□□□□ -0.78
MSH5-204ENST00000375755 FXYD2P54710 66 aa10.21□□□□□ -0.78
MSH5-204ENST00000375755 PSG3Q16557 428 aa10.21□□□□□ -0.78
MSH5-204ENST00000375755 EXOC3-AS1Q8N2X6 119 aa10.21□□□□□ -0.78
MSH5-204ENST00000375755 TPPP3Q9BW30 176 aa10.21□□□□□ -0.78
MSH5-204ENST00000375755 TSSC4Q9Y5U2 329 aaPredicted RBP10.21□□□□□ -0.78
MSH5-204ENST00000375755 SMIM13P0DJ93 91 aa10.2□□□□□ -0.78
MSH5-204ENST00000375755 CRYBA4P53673 196 aa10.2□□□□□ -0.78
MSH5-204ENST00000375755 ACACBO00763 2458 aa10.2□□□□□ -0.78
MSH5-204ENST00000375755 D6R8Y8 96 aa10.2□□□□□ -0.78
MSH5-204ENST00000375755 TMEM200BQ69YZ2 307 aa10.2□□□□□ -0.78
MSH5-204ENST00000375755 ZNF414Q96IQ9 312 aa10.2□□□□□ -0.78
MSH5-204ENST00000375755 NGBQ9NPG2 151 aa10.2□□□□□ -0.78
MSH5-204ENST00000375755 IGHV3-21A0A0B4J1V1 117 aa10.2□□□□□ -0.78
MSH5-204ENST00000375755 K7ERJ3 54 aa10.2□□□□□ -0.78
MSH5-204ENST00000375755 GCSHP23434 173 aa10.2□□□□□ -0.78
MSH5-204ENST00000375755 SUB1P53999 127 aaKnown RBP eCLIP10.2□□□□□ -0.782e-7■■□□□ 14.2
MSH5-204ENST00000375755 ZNF833PQ6ZTB9 187 aa10.2□□□□□ -0.78
MSH5-204ENST00000375755 MALRD1Q5VYJ5 2156 aa10.19□□□□□ -0.78
MSH5-204ENST00000375755 CELSR2Q9HCU4 2923 aa10.19□□□□□ -0.78
MSH5-204ENST00000375755 CKS1BP61024 79 aa10.19□□□□□ -0.78
MSH5-204ENST00000375755 DIAPH2-AS1Q14236 149 aa10.19□□□□□ -0.78
MSH5-204ENST00000375755 MTURNQ8N3F0 131 aa10.19□□□□□ -0.78
MSH5-204ENST00000375755 TMEM167AQ8TBQ9 72 aa10.19□□□□□ -0.78
MSH5-204ENST00000375755 TMEM8BA6NDV4 472 aa10.19□□□□□ -0.78
MSH5-204ENST00000375755 HCP5Q6MZN7 132 aa10.19□□□□□ -0.78
MSH5-204ENST00000375755 ATP6V0BQ99437 205 aa10.19□□□□□ -0.78
MSH5-204ENST00000375755 OTORQ9NRC9 128 aa10.19□□□□□ -0.78
MSH5-204ENST00000375755 DKK2Q9UBU2 259 aa10.19□□□□□ -0.78
MSH5-204ENST00000375755 SERTM2A0A1B0GWG4 89 aa10.18□□□□□ -0.78
MSH5-204ENST00000375755 GAGE12HA6NDE8 117 aa10.18□□□□□ -0.78
MSH5-204ENST00000375755 TNFRSF13BO14836 293 aaPredicted RBP10.18□□□□□ -0.78
MSH5-204ENST00000375755 WFDC3Q8IUB2 231 aa10.18□□□□□ -0.78
MSH5-204ENST00000375755 BCL6BQ8N143 479 aaPredicted RBP10.18□□□□□ -0.78
MSH5-204ENST00000375755 VGLL1Q99990 258 aa10.18□□□□□ -0.78
MSH5-204ENST00000375755 TTTY13Q9BZ97 58 aa10.18□□□□□ -0.78
MSH5-204ENST00000375755 A0A1W2PPI3 338 aa10.18□□□□□ -0.78
MSH5-204ENST00000375755 HOXB4P17483 251 aaPredicted RBP10.18□□□□□ -0.78
MSH5-204ENST00000375755 LOXP28300 417 aaPredicted RBP10.18□□□□□ -0.78
MSH5-204ENST00000375755 CD300EQ496F6 205 aaPredicted RBP10.18□□□□□ -0.78
MSH5-204ENST00000375755 IFI27L1Q96BM0 104 aa10.18□□□□□ -0.78
MSH5-204ENST00000375755 PRELID3AQ96N28 172 aa10.18□□□□□ -0.78
MSH5-204ENST00000375755 LINC00574Q9H8X3 128 aa10.18□□□□□ -0.78
MSH5-204ENST00000375755 TPSG1Q9NRR2 321 aa10.18□□□□□ -0.78
MSH5-204ENST00000375755 ABCA1O95477 2261 aa10.18□□□□□ -0.78
MSH5-204ENST00000375755 PAX8Q06710 450 aa10.18□□□□□ -0.78
MSH5-204ENST00000375755 TRGV9Q99603 122 aa10.18□□□□□ -0.78
MSH5-204ENST00000375755 MED13LQ71F56 2210 aa10.17□□□□□ -0.78
MSH5-204ENST00000375755 ZFYVE26Q68DK2 2539 aa10.17□□□□□ -0.78
MSH5-204ENST00000375755 IGKV2D-26A0A0A0MRZ7 120 aa10.17□□□□□ -0.78
MSH5-204ENST00000375755 A0A1W2PPR1 153 aa10.17□□□□□ -0.78
MSH5-204ENST00000375755 TMEM213A2RRL7 107 aa10.17□□□□□ -0.78
MSH5-204ENST00000375755 K7EMI3 77 aa10.17□□□□□ -0.78
MSH5-204ENST00000375755 HBDP02042 147 aa10.17□□□□□ -0.78
MSH5-204ENST00000375755 CRYGCP07315 174 aa10.17□□□□□ -0.78
MSH5-204ENST00000375755 CRIP1P50238 77 aa10.17□□□□□ -0.78
MSH5-204ENST00000375755 WFDC2Q14508 124 aa10.17□□□□□ -0.78
MSH5-204ENST00000375755 FBXL19-AS1Q494R0 122 aa10.17□□□□□ -0.78
MSH5-204ENST00000375755 AMN1Q8IY45 258 aa10.17□□□□□ -0.78
MSH5-204ENST00000375755 PHLDA1Q8WV24 401 aaPredicted RBP10.17□□□□□ -0.78
MSH5-204ENST00000375755 ZNF672Q499Z4 452 aaPredicted RBP10.17□□□□□ -0.78
MSH5-204ENST00000375755 C8orf46Q8TAG6 207 aa10.17□□□□□ -0.78
MSH5-204ENST00000375755 SPANXB1Q9NS25 103 aaPredicted RBP10.17□□□□□ -0.78
MSH5-204ENST00000375755 A0A1B0GW15 77 aa10.16□□□□□ -0.78
MSH5-204ENST00000375755 B9A039 149 aa10.16□□□□□ -0.78
MSH5-204ENST00000375755 NDUFS7O75251 213 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms