RNA–Protein interactions for RNA: ENST00000375692.5

CLCNKA-202, Transcript of chloride voltage-gated channel Ka, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLCNKA, Length 2,581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-202ENST00000375692 FLNCQ14315 2725 aa11.11□□□□□ -0.63
CLCNKA-202ENST00000375692 PPBPP02775 128 aa11.11□□□□□ -0.63
CLCNKA-202ENST00000375692 GNLYP22749 145 aa11.11□□□□□ -0.63
CLCNKA-202ENST00000375692 KLF17Q5JT82 389 aaPredicted RBP11.11□□□□□ -0.63
CLCNKA-202ENST00000375692 LYZL1Q6UWQ5 148 aa11.11□□□□□ -0.63
CLCNKA-202ENST00000375692 AMN1Q8IY45 258 aa11.11□□□□□ -0.63
CLCNKA-202ENST00000375692 TMEM75Q8N9X5 138 aa11.11□□□□□ -0.63
CLCNKA-202ENST00000375692 RNASE6Q93091 150 aaKnown RBP11.11□□□□□ -0.63
CLCNKA-202ENST00000375692 SHANK2-AS3Q9BTD1 123 aa11.11□□□□□ -0.63
CLCNKA-202ENST00000375692 IGLV1-47P01700 117 aa11.11□□□□□ -0.63
CLCNKA-202ENST00000375692 PRB1P04280 392 aa11.11□□□□□ -0.63
CLCNKA-202ENST00000375692 FGF6P10767 208 aa11.11□□□□□ -0.63
CLCNKA-202ENST00000375692 FCGR2BP31994 310 aaPredicted RBP11.11□□□□□ -0.63
CLCNKA-202ENST00000375692 PEF1Q9UBV8 284 aaKnown RBP11.11□□□□□ -0.63
CLCNKA-202ENST00000375692 RABAC1Q9UI14 185 aa11.11□□□□□ -0.63
CLCNKA-202ENST00000375692 BUB1B-PAK6H3BSN5 160 aa11.1□□□□□ -0.63
CLCNKA-202ENST00000375692 K7EIM0 57 aa11.1□□□□□ -0.63
CLCNKA-202ENST00000375692 CNIH1O95406 144 aa11.1□□□□□ -0.63
CLCNKA-202ENST00000375692 DYNLRB1Q9NP97 96 aa11.1□□□□□ -0.63
CLCNKA-202ENST00000375692 DCHS2Q6V1P9 2916 aa11.1□□□□□ -0.63
CLCNKA-202ENST00000375692 IL4P05112 153 aa11.1□□□□□ -0.63
CLCNKA-202ENST00000375692 RPS20P60866 119 aaKnown RBP11.1□□□□□ -0.63
CLCNKA-202ENST00000375692 ZNF491Q8N8L2 437 aa11.1□□□□□ -0.63
CLCNKA-202ENST00000375692 ZNF414Q96IQ9 312 aa11.1□□□□□ -0.63
CLCNKA-202ENST00000375692 HILPDAQ9Y5L2 63 aa11.1□□□□□ -0.63
CLCNKA-202ENST00000375692 TRBV6-1A0A0K0K1D8 114 aa11.09□□□□□ -0.63
CLCNKA-202ENST00000375692 SMKR1H3BMG3 65 aa11.09□□□□□ -0.63
CLCNKA-202ENST00000375692 H3BRN7 92 aa11.09□□□□□ -0.63
CLCNKA-202ENST00000375692 CACNG7P62955 275 aa11.09□□□□□ -0.63
CLCNKA-202ENST00000375692 WFDC3Q8IUB2 231 aa11.09□□□□□ -0.63
CLCNKA-202ENST00000375692 GATD1Q8NB37 220 aa11.09□□□□□ -0.63
CLCNKA-202ENST00000375692 PRELID3AQ96N28 172 aa11.09□□□□□ -0.63
CLCNKA-202ENST00000375692 BBC3Q96PG8 261 aaPredicted RBP11.09□□□□□ -0.63
CLCNKA-202ENST00000375692 K7EQM0 130 aa11.09□□□□□ -0.63
CLCNKA-202ENST00000375692 PAX2Q02962 417 aa11.09□□□□□ -0.63
CLCNKA-202ENST00000375692 KAAG1Q9UBP8 84 aa11.09□□□□□ -0.63
CLCNKA-202ENST00000375692 GAGE10A6NGK3 116 aa11.08□□□□□ -0.64
CLCNKA-202ENST00000375692 SAP30O75446 220 aa11.08□□□□□ -0.64
CLCNKA-202ENST00000375692 S100A7P31151 101 aa11.08□□□□□ -0.64
CLCNKA-202ENST00000375692 PRSS57Q6UWY2 283 aa11.08□□□□□ -0.64
CLCNKA-202ENST00000375692 ZNF462Q96JM2 2506 aa11.08□□□□□ -0.64
CLCNKA-202ENST00000375692 MRPS12O15235 138 aaKnown RBP11.08□□□□□ -0.64
CLCNKA-202ENST00000375692 APOBEC3AP31941 199 aaPredicted RBP11.08□□□□□ -0.64
CLCNKA-202ENST00000375692 ARL6IP6Q8N6S5 226 aa11.08□□□□□ -0.64
CLCNKA-202ENST00000375692 RPEQ96AT9 228 aa11.08□□□□□ -0.64
CLCNKA-202ENST00000375692 RNF125Q96EQ8 232 aa11.08□□□□□ -0.64
CLCNKA-202ENST00000375692 JMJD8Q96S16 334 aa11.08□□□□□ -0.64
CLCNKA-202ENST00000375692 THYN1Q9P016 225 aa11.08□□□□□ -0.64
CLCNKA-202ENST00000375692 CT45A10P0DMU9 189 aa11.07□□□□□ -0.64
CLCNKA-202ENST00000375692 FAM104BQ5XKR9 115 aa11.07□□□□□ -0.64
CLCNKA-202ENST00000375692 ARHGAP32A7KAX9 2087 aa11.07□□□□□ -0.64
CLCNKA-202ENST00000375692 MYO18BQ8IUG5 2567 aa11.07□□□□□ -0.64
CLCNKA-202ENST00000375692 A0A1B0GW15 77 aa11.07□□□□□ -0.64
CLCNKA-202ENST00000375692 TMEM189A5PLL7 270 aa11.07□□□□□ -0.64
CLCNKA-202ENST00000375692 E7EQL1 145 aa11.07□□□□□ -0.64
CLCNKA-202ENST00000375692 SH2D1AO60880 128 aa11.07□□□□□ -0.64
CLCNKA-202ENST00000375692 SEC11AP67812 179 aa11.07□□□□□ -0.64
CLCNKA-202ENST00000375692 MRPL51Q4U2R6 128 aaKnown RBP11.07□□□□□ -0.64
CLCNKA-202ENST00000375692 ZNF493Q6ZR52 646 aa11.07□□□□□ -0.64
CLCNKA-202ENST00000375692 SVEP1Q4LDE5 3571 aa11.06□□□□□ -0.64
CLCNKA-202ENST00000375692 IGKV2-40A0A087WW87 121 aaPredicted RBP11.06□□□□□ -0.64
CLCNKA-202ENST00000375692 H3BUT2 72 aa11.06□□□□□ -0.64
CLCNKA-202ENST00000375692 IGKV2D-40P01614 121 aaPredicted RBP11.06□□□□□ -0.64
CLCNKA-202ENST00000375692 RAB37Q96AX2 223 aa11.06□□□□□ -0.64
CLCNKA-202ENST00000375692 HRNRQ86YZ3 2850 aaPredicted RBP11.06□□□□□ -0.64
CLCNKA-202ENST00000375692 PCP2Q8IVA1 136 aa11.06□□□□□ -0.64
CLCNKA-202ENST00000375692 ORMDL3Q8N138 153 aa11.06□□□□□ -0.64
CLCNKA-202ENST00000375692 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.05□□□□□ -0.64
CLCNKA-202ENST00000375692 TIMM23O14925 209 aa11.05□□□□□ -0.64
CLCNKA-202ENST00000375692 IGFL4Q6B9Z1 124 aa11.05□□□□□ -0.64
CLCNKA-202ENST00000375692 BOD1L2Q8IYS8 172 aa11.05□□□□□ -0.64
CLCNKA-202ENST00000375692 TNFRSF14Q92956 283 aa11.05□□□□□ -0.64
CLCNKA-202ENST00000375692 U3KQK5 164 aa11.05□□□□□ -0.64
CLCNKA-202ENST00000375692 USP9XQ93008 2570 aaPredicted RBP11.05□□□□□ -0.64
CLCNKA-202ENST00000375692 Q6AWC8 147 aa11.05□□□□□ -0.64
CLCNKA-202ENST00000375692 LYPD1Q8N2G4 141 aa11.05□□□□□ -0.64
CLCNKA-202ENST00000375692 MEGF9Q9H1U4 602 aa11.05□□□□□ -0.64
CLCNKA-202ENST00000375692 C9orf118A6NHY6 69 aa11.04□□□□□ -0.64
CLCNKA-202ENST00000375692 SHISA9B4DS77 424 aa11.04□□□□□ -0.64
CLCNKA-202ENST00000375692 NPYP01303 97 aa11.04□□□□□ -0.64
CLCNKA-202ENST00000375692 NMUP48645 174 aa11.04□□□□□ -0.64
CLCNKA-202ENST00000375692 KIR3DS1Q14943 382 aa11.04□□□□□ -0.64
CLCNKA-202ENST00000375692 LGALS9BQ3B8N2 356 aa11.04□□□□□ -0.64
CLCNKA-202ENST00000375692 FBXL19-AS1Q494R0 122 aa11.04□□□□□ -0.64
CLCNKA-202ENST00000375692 LGALS9CQ6DKI2 356 aa11.04□□□□□ -0.64
CLCNKA-202ENST00000375692 Q8TAT8 98 aa11.04□□□□□ -0.64
CLCNKA-202ENST00000375692 AP1S3Q96PC3 154 aa11.04□□□□□ -0.64
CLCNKA-202ENST00000375692 DKK2Q9UBU2 259 aa11.04□□□□□ -0.64
CLCNKA-202ENST00000375692 PPIAL4CA0A0B4J2A2 164 aa11.04□□□□□ -0.64
CLCNKA-202ENST00000375692 A1L4Q6 167 aa11.04□□□□□ -0.64
CLCNKA-202ENST00000375692 K7ERU9 68 aa11.04□□□□□ -0.64
CLCNKA-202ENST00000375692 SMAD7O15105 426 aaKnown RBP11.04□□□□□ -0.64
CLCNKA-202ENST00000375692 IGHV3-23P01764 117 aa11.04□□□□□ -0.64
CLCNKA-202ENST00000375692 PPIAL4GP0DN37 164 aa11.04□□□□□ -0.64
CLCNKA-202ENST00000375692 EGR2P11161 476 aaPredicted RBP11.04□□□□□ -0.64
CLCNKA-202ENST00000375692 CKS2P33552 79 aa11.04□□□□□ -0.64
CLCNKA-202ENST00000375692 TWIST1Q15672 202 aa11.04□□□□□ -0.64
CLCNKA-202ENST00000375692 UFSP1Q6NVU6 142 aa11.04□□□□□ -0.64
CLCNKA-202ENST00000375692 C18orf15Q96N68 181 aa11.04□□□□□ -0.64
CLCNKA-202ENST00000375692 AAMDCQ9H7C9 122 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 82.2 ms