RNA–Protein interactions for RNA: ENST00000375218.3

UBR4-201, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 4,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-201ENST00000375218 PFN4Q8NHR9 129 aa7□□□□□ -1.29
UBR4-201ENST00000375218 VGLL1Q99990 258 aa7□□□□□ -1.29
UBR4-201ENST00000375218 IGHV5-10-1A0A0J9YXX1 117 aa7□□□□□ -1.29
UBR4-201ENST00000375218 VDAC1P21796 283 aa7□□□□□ -1.29
UBR4-201ENST00000375218 LYPD4Q6UWN0 246 aa7□□□□□ -1.29
UBR4-201ENST00000375218 EIF5A2Q9GZV4 153 aaKnown RBP7□□□□□ -1.29
UBR4-201ENST00000375218 BCL2L10Q9HD36 194 aa7□□□□□ -1.29
UBR4-201ENST00000375218 TNFRSF19Q9NS68 423 aa7□□□□□ -1.29
UBR4-201ENST00000375218 CBLN1P23435 193 aa6.99□□□□□ -1.29
UBR4-201ENST00000375218 ORMDL2Q53FV1 153 aa6.99□□□□□ -1.29
UBR4-201ENST00000375218 KTN1-AS1Q86SY8 53 aa6.99□□□□□ -1.29
UBR4-201ENST00000375218 OR51H1Q8NH63 302 aa6.99□□□□□ -1.29
UBR4-201ENST00000375218 A8MWL6 223 aa6.99□□□□□ -1.29
UBR4-201ENST00000375218 K7N7A8 449 aa6.99□□□□□ -1.29
UBR4-201ENST00000375218 CSN1S1P47710 185 aa6.99□□□□□ -1.29
UBR4-201ENST00000375218 C6orf99Q4VX62 202 aa6.99□□□□□ -1.29
UBR4-201ENST00000375218 S100A7L2Q5SY68 101 aa6.99□□□□□ -1.29
UBR4-201ENST00000375218 C12orf73Q69YU5 71 aa6.99□□□□□ -1.29
UBR4-201ENST00000375218 SLC25A42Q86VD7 318 aa6.99□□□□□ -1.29
UBR4-201ENST00000375218 IMMP2LQ96T52 175 aa6.99□□□□□ -1.29
UBR4-201ENST00000375218 UBE2L6O14933 153 aa6.99□□□□□ -1.29
UBR4-201ENST00000375218 MED14OSP0DP75 135 aa6.99□□□□□ -1.29
UBR4-201ENST00000375218 NCBP2P52298 156 aaKnown RBP eCLIP6.99□□□□□ -1.29
UBR4-201ENST00000375218 SMIM11AP58511 58 aa6.99□□□□□ -1.29
UBR4-201ENST00000375218 RPS11P62280 158 aaKnown RBP eCLIP6.99□□□□□ -1.29
UBR4-201ENST00000375218 EBLN2Q6P2I7 272 aa6.99□□□□□ -1.29
UBR4-201ENST00000375218 ZNF645Q8N7E2 425 aa6.99□□□□□ -1.29
UBR4-201ENST00000375218 GEMIN6Q8WXD5 167 aaKnown RBP6.99□□□□□ -1.29
UBR4-201ENST00000375218 TRAV9-1A0A075B6T8 112 aa6.98□□□□□ -1.29
UBR4-201ENST00000375218 LOC389332A0A1B0GUA5 103 aa6.98□□□□□ -1.29
UBR4-201ENST00000375218 LINC00869P0C866 280 aa6.98□□□□□ -1.29
UBR4-201ENST00000375218 MP68P56378 58 aa6.98□□□□□ -1.29
UBR4-201ENST00000375218 LINC00303Q3SY05 128 aa6.98□□□□□ -1.29
UBR4-201ENST00000375218 BPIFA4PQ86YQ2 179 aa6.98□□□□□ -1.29
UBR4-201ENST00000375218 POLR2J2Q9GZM3 115 aaKnown RBP6.98□□□□□ -1.29
UBR4-201ENST00000375218 HHLA3Q9XRX5 114 aa6.98□□□□□ -1.29
UBR4-201ENST00000375218 ZANQ9Y493 2812 aa6.98□□□□□ -1.29
UBR4-201ENST00000375218 KIAA2026Q5HYC2 2103 aa6.98□□□□□ -1.29
UBR4-201ENST00000375218 ANK2Q01484 3957 aa6.98□□□□□ -1.29
UBR4-201ENST00000375218 CEP250Q9BV73 2442 aa6.98□□□□□ -1.29
UBR4-201ENST00000375218 IGLV3-12A0A075B6K2 115 aa6.98□□□□□ -1.29
UBR4-201ENST00000375218 TRBV19A0A075B6N1 114 aa6.98□□□□□ -1.29
UBR4-201ENST00000375218 IGHA1P01876 353 aa6.98□□□□□ -1.29
UBR4-201ENST00000375218 C1orf140Q5VVS0 124 aa6.98□□□□□ -1.29
UBR4-201ENST00000375218 PRR15Q8IV56 129 aa6.98□□□□□ -1.29
UBR4-201ENST00000375218 RPP25LQ8N5L8 163 aaKnown RBP6.98□□□□□ -1.29
UBR4-201ENST00000375218 PGLYRP4Q96LB8 373 aa6.98□□□□□ -1.29
UBR4-201ENST00000375218 TRAV8-1A0A0A6YYK1 113 aa6.98□□□□□ -1.29
UBR4-201ENST00000375218 YPEL1O60688 119 aa6.98□□□□□ -1.29
UBR4-201ENST00000375218 IGHV4-31P0DP07 118 aa6.98□□□□□ -1.29
UBR4-201ENST00000375218 GATA2P23769 480 aaPredicted RBP6.98□□□□□ -1.29
UBR4-201ENST00000375218 YPEL3P61236 119 aaPredicted RBP6.98□□□□□ -1.29
UBR4-201ENST00000375218 YPEL2Q96QA6 119 aa6.98□□□□□ -1.29
UBR4-201ENST00000375218 LINC00527Q9UJ94 153 aa6.98□□□□□ -1.29
UBR4-201ENST00000375218 IGHV3-20A0A0C4DH32 117 aa6.98□□□□□ -1.29
UBR4-201ENST00000375218 A8MUN3 132 aa6.98□□□□□ -1.29
UBR4-201ENST00000375218 C9JQL5 133 aa6.98□□□□□ -1.29
UBR4-201ENST00000375218 TMEM256-PLSCR3K7ERE1 68 aa6.98□□□□□ -1.29
UBR4-201ENST00000375218 HLA-DOBP13765 273 aa6.98□□□□□ -1.29
UBR4-201ENST00000375218 PSMB2P49721 201 aa6.98□□□□□ -1.29
UBR4-201ENST00000375218 SS18Q15532 418 aa6.98□□□□□ -1.29
UBR4-201ENST00000375218 DRAM1Q8N682 238 aa6.98□□□□□ -1.29
UBR4-201ENST00000375218 MPC1Q9Y5U8 109 aa6.98□□□□□ -1.29
UBR4-201ENST00000375218 TRAV12-2A0A075B6T6 113 aa6.97□□□□□ -1.29
UBR4-201ENST00000375218 CST7O76096 145 aa6.97□□□□□ -1.29
UBR4-201ENST00000375218 CRIP3Q6Q6R5 217 aa6.97□□□□□ -1.29
UBR4-201ENST00000375218 FOXL2NBQ6ZUU3 175 aa6.97□□□□□ -1.29
UBR4-201ENST00000375218 C22orf34Q6ZV56 151 aa6.97□□□□□ -1.29
UBR4-201ENST00000375218 ERCC8Q13216 396 aa6.97□□□□□ -1.29
UBR4-201ENST00000375218 MARCH3Q86UD3 253 aa6.97□□□□□ -1.29
UBR4-201ENST00000375218 ZNF581Q9P0T4 197 aa6.97□□□□□ -1.29
UBR4-201ENST00000375218 TP73-AS1Q9UF72 201 aa6.97□□□□□ -1.29
UBR4-201ENST00000375218 EP300Q09472 2414 aaPredicted RBP6.97□□□□□ -1.29
UBR4-201ENST00000375218 hADV29S1A0JD25 119 aa6.97□□□□□ -1.29
UBR4-201ENST00000375218 ZNF73O43830 326 aaPredicted RBP6.97□□□□□ -1.29
UBR4-201ENST00000375218 CCL4P13236 92 aa6.97□□□□□ -1.29
UBR4-201ENST00000375218 LGALS3P17931 250 aaKnown RBP6.97□□□□□ -1.29
UBR4-201ENST00000375218 GTF3C1Q12789 2109 aa6.97□□□□□ -1.29
UBR4-201ENST00000375218 NNATQ16517 81 aa6.97□□□□□ -1.29
UBR4-201ENST00000375218 MRPL30Q8TCC3 161 aaKnown RBP6.97□□□□□ -1.29
UBR4-201ENST00000375218 SRXN1Q9BYN0 137 aa6.96□□□□□ -1.29
UBR4-201ENST00000375218 MAP1BP46821 2468 aaKnown RBP6.96□□□□□ -1.3
UBR4-201ENST00000375218 CACNA1CQ13936 2221 aa6.96□□□□□ -1.3
UBR4-201ENST00000375218 IGKV1D-43A0A0B4J1Z2 117 aa6.96□□□□□ -1.3
UBR4-201ENST00000375218 MKXQ8IYA7 352 aa6.96□□□□□ -1.3
UBR4-201ENST00000375218 HCFC1P51610 2035 aa6.96□□□□□ -1.3
UBR4-201ENST00000375218 ANK3Q12955 4377 aaKnown RBP6.96□□□□□ -1.3
UBR4-201ENST00000375218 A0A087WWC5 75 aa6.96□□□□□ -1.3
UBR4-201ENST00000375218 H3BT86 120 aa6.96□□□□□ -1.3
UBR4-201ENST00000375218 MIC13Q5XKP0 118 aa6.96□□□□□ -1.3
UBR4-201ENST00000375218 Q6ZQT7 251 aa6.96□□□□□ -1.3
UBR4-201ENST00000375218 SIGLECL1Q8N7X8 197 aa6.96□□□□□ -1.3
UBR4-201ENST00000375218 PLEKHF2Q9H8W4 249 aa6.96□□□□□ -1.3
UBR4-201ENST00000375218 UBR5O95071 2799 aaPredicted RBP6.96□□□□□ -1.3
UBR4-201ENST00000375218 PRR14LQ5THK1 2151 aa6.95□□□□□ -1.3
UBR4-201ENST00000375218 C15orf62A8K5M9 175 aa6.95□□□□□ -1.3
UBR4-201ENST00000375218 PITX3O75364 302 aa6.95□□□□□ -1.3
UBR4-201ENST00000375218 NPC2P61916 151 aa6.95□□□□□ -1.3
UBR4-201ENST00000375218 C11orf72Q8NBR9 251 aa6.95□□□□□ -1.3
UBR4-201ENST00000375218 OR8B3Q8NGG8 313 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms