RNA–Protein interactions for RNA: ENST00000374949.2

HLA-DQA1-202, Transcript of major histocompatibility complex, class II, DQ alpha 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQA1, Length 1,060 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1-202ENST00000374949 CARHSP1Q9Y2V2 147 aaKnown RBP8.25□□□□□ -1.09
HLA-DQA1-202ENST00000374949 STARD9Q9P2P6 4700 aa8.25□□□□□ -1.09
HLA-DQA1-202ENST00000374949 A0A087X0K7 114 aa8.24□□□□□ -1.09
HLA-DQA1-202ENST00000374949 A8MWP6 167 aa8.24□□□□□ -1.09
HLA-DQA1-202ENST00000374949 CHEK1O14757 476 aa8.24□□□□□ -1.09
HLA-DQA1-202ENST00000374949 ZNF253O75346 499 aa8.24□□□□□ -1.09
HLA-DQA1-202ENST00000374949 NDUFB4O95168 129 aa8.24□□□□□ -1.09
HLA-DQA1-202ENST00000374949 APOC3P02656 99 aa8.24□□□□□ -1.09
HLA-DQA1-202ENST00000374949 FRMD6-AS1P0C7T7 363 aa8.24□□□□□ -1.09
HLA-DQA1-202ENST00000374949 ADCYAP1P18509 176 aa8.24□□□□□ -1.09
HLA-DQA1-202ENST00000374949 MEOX2P50222 304 aa8.24□□□□□ -1.09
HLA-DQA1-202ENST00000374949 SLURP1P55000 103 aa8.24□□□□□ -1.09
HLA-DQA1-202ENST00000374949 FAM74A3Q4VXF1 159 aa8.24□□□□□ -1.09
HLA-DQA1-202ENST00000374949 FAM90A2PQ658T7 463 aa8.24□□□□□ -1.09
HLA-DQA1-202ENST00000374949 SIGLEC15Q6ZMC9 328 aa8.24□□□□□ -1.09
HLA-DQA1-202ENST00000374949 GLMPQ8WWB7 406 aa8.24□□□□□ -1.09
HLA-DQA1-202ENST00000374949 RPUSD4Q96CM3 377 aaKnown RBP8.24□□□□□ -1.09
HLA-DQA1-202ENST00000374949 TCEAL7Q9BRU2 100 aa8.24□□□□□ -1.09
HLA-DQA1-202ENST00000374949 Q9H3A6 140 aa8.24□□□□□ -1.09
HLA-DQA1-202ENST00000374949 HELTA6NFD8 242 aa8.23□□□□□ -1.09
HLA-DQA1-202ENST00000374949 GGTLC3B5MD39 225 aa8.23□□□□□ -1.09
HLA-DQA1-202ENST00000374949 SLC25A5P05141 298 aaKnown RBP8.23□□□□□ -1.09
HLA-DQA1-202ENST00000374949 HIST1H2BAQ96A08 127 aa8.23□□□□□ -1.09
HLA-DQA1-202ENST00000374949 C11orf52Q96A22 123 aa8.23□□□□□ -1.09
HLA-DQA1-202ENST00000374949 AAMDCQ9H7C9 122 aa8.23□□□□□ -1.09
HLA-DQA1-202ENST00000374949 PEMTQ9UBM1 199 aa8.23□□□□□ -1.09
HLA-DQA1-202ENST00000374949 EPDR1Q9UM22 224 aa8.23□□□□□ -1.09
HLA-DQA1-202ENST00000374949 LYSTQ99698 3801 aa8.22□□□□□ -1.09
HLA-DQA1-202ENST00000374949 DNAH1Q9P2D7 4330 aa8.22□□□□□ -1.09
HLA-DQA1-202ENST00000374949 SCO2A0A1W2PP80 73 aa8.22□□□□□ -1.09
HLA-DQA1-202ENST00000374949 TMEM213A2RRL7 107 aa8.22□□□□□ -1.09
HLA-DQA1-202ENST00000374949 ZNF727A8MUV8 499 aa8.22□□□□□ -1.09
HLA-DQA1-202ENST00000374949 CBLN1P23435 193 aa8.22□□□□□ -1.09
HLA-DQA1-202ENST00000374949 TMEM241Q24JQ0 296 aa8.22□□□□□ -1.09
HLA-DQA1-202ENST00000374949 ZNF674Q2M3X9 581 aa8.22□□□□□ -1.09
HLA-DQA1-202ENST00000374949 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.22□□□□□ -1.09
HLA-DQA1-202ENST00000374949 EXOC3-AS1Q8N2X6 119 aa8.22□□□□□ -1.09
HLA-DQA1-202ENST00000374949 SVBPQ8N300 66 aa8.22□□□□□ -1.09
HLA-DQA1-202ENST00000374949 ARL6IP6Q8N6S5 226 aa8.22□□□□□ -1.09
HLA-DQA1-202ENST00000374949 C5orf17Q8NAS9 161 aa8.22□□□□□ -1.09
HLA-DQA1-202ENST00000374949 CMTM2Q8TAZ6 248 aa8.22□□□□□ -1.09
HLA-DQA1-202ENST00000374949 DLX4Q92988 240 aaPredicted RBP8.22□□□□□ -1.09
HLA-DQA1-202ENST00000374949 SMIM7Q9BQ49 75 aa8.22□□□□□ -1.09
HLA-DQA1-202ENST00000374949 NIPSNAP3BQ9BS92 247 aa8.22□□□□□ -1.09
HLA-DQA1-202ENST00000374949 PARLQ9H300 379 aa8.22□□□□□ -1.09
HLA-DQA1-202ENST00000374949 CSMD3Q7Z407 3707 aa8.22□□□□□ -1.09
HLA-DQA1-202ENST00000374949 C2orf70A6NJV1 201 aa8.21□□□□□ -1.1
HLA-DQA1-202ENST00000374949 SLC17A3O00476 420 aa8.21□□□□□ -1.1
HLA-DQA1-202ENST00000374949 PEX7O00628 323 aa8.21□□□□□ -1.1
HLA-DQA1-202ENST00000374949 SAP30O75446 220 aa8.21□□□□□ -1.1
HLA-DQA1-202ENST00000374949 S100A9P06702 114 aaKnown RBP8.21□□□□□ -1.1
HLA-DQA1-202ENST00000374949 FOLR2P14207 255 aa8.21□□□□□ -1.1
HLA-DQA1-202ENST00000374949 INSL3P51460 131 aa8.21□□□□□ -1.1
HLA-DQA1-202ENST00000374949 RPL11P62913 178 aaKnown RBP8.21□□□□□ -1.1
HLA-DQA1-202ENST00000374949 GUCA2BQ16661 112 aa8.21□□□□□ -1.1
HLA-DQA1-202ENST00000374949 ADAMTSL5Q6ZMM2 481 aa8.21□□□□□ -1.1
HLA-DQA1-202ENST00000374949 TCF24Q7RTU0 167 aa8.21□□□□□ -1.1
HLA-DQA1-202ENST00000374949 OR9G4Q8NGQ1 327 aa8.21□□□□□ -1.1
HLA-DQA1-202ENST00000374949 TVP23CQ96ET8 276 aa8.21□□□□□ -1.1
HLA-DQA1-202ENST00000374949 SLC50A1Q9BRV3 221 aa8.21□□□□□ -1.1
HLA-DQA1-202ENST00000374949 ZNF331Q9NQX6 463 aaPredicted RBP8.21□□□□□ -1.1
HLA-DQA1-202ENST00000374949 CLEC5AQ9NY25 188 aa8.21□□□□□ -1.1
HLA-DQA1-202ENST00000374949 OVOL1O14753 267 aa8.2□□□□□ -1.1
HLA-DQA1-202ENST00000374949 SNAPINO95295 136 aa8.2□□□□□ -1.1
HLA-DQA1-202ENST00000374949 EDN2P20800 178 aa8.2□□□□□ -1.1
HLA-DQA1-202ENST00000374949 AKR1C3P42330 323 aa8.2□□□□□ -1.1
HLA-DQA1-202ENST00000374949 CSN1S1P47710 185 aa8.2□□□□□ -1.1
HLA-DQA1-202ENST00000374949 CNN1P51911 297 aaKnown RBP8.2□□□□□ -1.1
HLA-DQA1-202ENST00000374949 C2CD4CQ8TF44 421 aa8.2□□□□□ -1.1
HLA-DQA1-202ENST00000374949 ATG101Q9BSB4 218 aa8.2□□□□□ -1.1
HLA-DQA1-202ENST00000374949 ZMAT4Q9H898 229 aa8.2□□□□□ -1.1
HLA-DQA1-202ENST00000374949 SDF2L1Q9HCN8 221 aa8.2□□□□□ -1.1
HLA-DQA1-202ENST00000374949 NAT8Q9UHE5 227 aa8.2□□□□□ -1.1
HLA-DQA1-202ENST00000374949 PRELID1Q9Y255 219 aa8.2□□□□□ -1.1
HLA-DQA1-202ENST00000374949 K7EQM0 130 aa8.19□□□□□ -1.1
HLA-DQA1-202ENST00000374949 M0R036 132 aa8.19□□□□□ -1.1
HLA-DQA1-202ENST00000374949 TCRAP04437 139 aa8.19□□□□□ -1.1
HLA-DQA1-202ENST00000374949 CSN3P07498 182 aa8.19□□□□□ -1.1
HLA-DQA1-202ENST00000374949 RPL35P42766 123 aaKnown RBP8.19□□□□□ -1.1
HLA-DQA1-202ENST00000374949 TAS2R60P59551 318 aa8.19□□□□□ -1.1
HLA-DQA1-202ENST00000374949 GNG5P63218 68 aa8.19□□□□□ -1.1
HLA-DQA1-202ENST00000374949 CLRN3Q8NCR9 226 aa8.19□□□□□ -1.1
HLA-DQA1-202ENST00000374949 C16orf92Q96LL3 132 aa8.19□□□□□ -1.1
HLA-DQA1-202ENST00000374949 DERL1Q9BUN8 251 aa8.19□□□□□ -1.1
HLA-DQA1-202ENST00000374949 NRN1Q9NPD7 142 aa8.19□□□□□ -1.1
HLA-DQA1-202ENST00000374949 RPH3ALQ9UNE2 315 aa8.19□□□□□ -1.1
HLA-DQA1-202ENST00000374949 KLF12Q9Y4X4 402 aa8.19□□□□□ -1.1
HLA-DQA1-202ENST00000374949 TRAV8-2A0A0B4J237 113 aa8.18□□□□□ -1.1
HLA-DQA1-202ENST00000374949 SERTM2A0A1B0GWG4 89 aa8.18□□□□□ -1.1
HLA-DQA1-202ENST00000374949 C9JCJ5 164 aa8.18□□□□□ -1.1
HLA-DQA1-202ENST00000374949 DIRC3C9JPN6 131 aa8.18□□□□□ -1.1
HLA-DQA1-202ENST00000374949 ID1P41134 155 aa8.18□□□□□ -1.1
HLA-DQA1-202ENST00000374949 UBE2G1P62253 170 aa8.18□□□□□ -1.1
HLA-DQA1-202ENST00000374949 PNRC1Q12796 327 aaPredicted RBP8.18□□□□□ -1.1
HLA-DQA1-202ENST00000374949 TMEM183BQ1AE95 376 aa8.18□□□□□ -1.1
HLA-DQA1-202ENST00000374949 SAMD13Q5VXD3 122 aa8.18□□□□□ -1.1
HLA-DQA1-202ENST00000374949 IGFL4Q6B9Z1 124 aa8.18□□□□□ -1.1
HLA-DQA1-202ENST00000374949 LCN12Q6JVE5 192 aa8.18□□□□□ -1.1
HLA-DQA1-202ENST00000374949 LINC00479Q96M42 142 aa8.18□□□□□ -1.1
HLA-DQA1-202ENST00000374949 TM2D3Q9BRN9 247 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms