RNA–Protein interactions for RNA: ENST00000374685.8

RXRB-202, Transcript of retinoid X receptor beta, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RXRB, Length 2,846 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-202ENST00000374685 CHRDL1Q9BU40 450 aa14.32□□□□□ -0.12
RXRB-202ENST00000374685 DOPEY2Q9Y3R5 2298 aa14.32□□□□□ -0.12
RXRB-202ENST00000374685 PLP1P60201 277 aa14.32□□□□□ -0.12
RXRB-202ENST00000374685 BORCS7Q96B45 105 aa14.32□□□□□ -0.12
RXRB-202ENST00000374685 TLN2Q9Y4G6 2542 aa14.31□□□□□ -0.12
RXRB-202ENST00000374685 IGHV4-30-2A0A087WSY4 118 aa14.31□□□□□ -0.12
RXRB-202ENST00000374685 GAGE12BA1L429 117 aa14.31□□□□□ -0.12
RXRB-202ENST00000374685 HIST1H1EP10412 219 aaKnown RBP14.31□□□□□ -0.12
RXRB-202ENST00000374685 SRSF8Q9BRL6 282 aaKnown RBP14.31□□□□□ -0.12
RXRB-202ENST00000374685 SHANK2-AS3Q9BTD1 123 aa14.31□□□□□ -0.12
RXRB-202ENST00000374685 SSBP4Q9BWG4 385 aaPredicted RBP14.31□□□□□ -0.12
RXRB-202ENST00000374685 IGHV3-49A0A0A0MS15 119 aa14.31□□□□□ -0.12
RXRB-202ENST00000374685 C15orf32Q32M92 178 aa14.31□□□□□ -0.12
RXRB-202ENST00000374685 WDR73Q6P4I2 378 aa14.31□□□□□ -0.12
RXRB-202ENST00000374685 ERASQ7Z444 233 aa14.31□□□□□ -0.12
RXRB-202ENST00000374685 DEFB125Q8N687 156 aa14.31□□□□□ -0.12
RXRB-202ENST00000374685 GPR82Q96P67 336 aa14.31□□□□□ -0.12
RXRB-202ENST00000374685 C1RLQ9NZP8 487 aa14.31□□□□□ -0.12
RXRB-202ENST00000374685 NPIPB5A8MRT5 1133 aa14.3□□□□□ -0.12
RXRB-202ENST00000374685 F8W735 103 aaPredicted RBP14.3□□□□□ -0.12
RXRB-202ENST00000374685 HLA-DRB1P01911 266 aa14.3□□□□□ -0.12
RXRB-202ENST00000374685 IGLL1P15814 213 aa14.3□□□□□ -0.12
RXRB-202ENST00000374685 AMMECR1LQ6DCA0 310 aa14.3□□□□□ -0.12
RXRB-202ENST00000374685 PIMREGQ9BSJ6 248 aa14.3□□□□□ -0.12
RXRB-202ENST00000374685 THYN1Q9P016 225 aa14.3□□□□□ -0.12
RXRB-202ENST00000374685 COX19Q49B96 90 aa14.3□□□□□ -0.12
RXRB-202ENST00000374685 TSKUQ8WUA8 353 aa14.3□□□□□ -0.12
RXRB-202ENST00000374685 NAV2Q8IVL1 2488 aa14.3□□□□□ -0.12
RXRB-202ENST00000374685 HIGD1CA8MV81 97 aa14.29□□□□□ -0.12
RXRB-202ENST00000374685 OOSP1A8MZH6 123 aa14.29□□□□□ -0.12
RXRB-202ENST00000374685 RIPPLY3P57055 190 aa14.29□□□□□ -0.12
RXRB-202ENST00000374685 LCN12Q6JVE5 192 aa14.29□□□□□ -0.12
RXRB-202ENST00000374685 TTC9CQ8N5M4 171 aa14.29□□□□□ -0.12
RXRB-202ENST00000374685 ZNF331Q9NQX6 463 aaPredicted RBP14.29□□□□□ -0.12
RXRB-202ENST00000374685 ZNF207O43670 478 aaKnown RBP14.29□□□□□ -0.12
RXRB-202ENST00000374685 MAPK1IP1LQ8NDC0 245 aa14.29□□□□□ -0.12
RXRB-202ENST00000374685 H3BRN7 92 aa14.28□□□□□ -0.12
RXRB-202ENST00000374685 IGHV4-38-2P0DP08 117 aa14.28□□□□□ -0.12
RXRB-202ENST00000374685 MPV17L2Q567V2 206 aa14.28□□□□□ -0.12
RXRB-202ENST00000374685 NUP35Q8NFH5 326 aa14.28□□□□□ -0.12
RXRB-202ENST00000374685 FBN2P35556 2912 aa14.28□□□□□ -0.12
RXRB-202ENST00000374685 TMEM136Q6ZRR5 245 aa14.28□□□□□ -0.12
RXRB-202ENST00000374685 DAZAP1Q96EP5 407 aaKnown RBP14.28□□□□□ -0.12
RXRB-202ENST00000374685 TRBV19A0A075B6N1 114 aa14.28□□□□□ -0.12
RXRB-202ENST00000374685 LOC102724200A0A096LPH7 203 aaPredicted RBP14.28□□□□□ -0.12
RXRB-202ENST00000374685 CLEC3BP05452 202 aa14.28□□□□□ -0.12
RXRB-202ENST00000374685 BVES-AS1Q5T3Y7 98 aa14.28□□□□□ -0.12
RXRB-202ENST00000374685 OTORQ9NRC9 128 aa14.28□□□□□ -0.12
RXRB-202ENST00000374685 SMIM27A0A1W2PRY6 76 aa14.27□□□□□ -0.12
RXRB-202ENST00000374685 SRIP30626 198 aa14.27□□□□□ -0.12
RXRB-202ENST00000374685 EBI3Q14213 229 aa14.27□□□□□ -0.12
RXRB-202ENST00000374685 CLEC19AQ6UXS0 136 aa14.27□□□□□ -0.12
RXRB-202ENST00000374685 FAM19A2Q8N3H0 131 aa14.27□□□□□ -0.12
RXRB-202ENST00000374685 TPPP3Q9BW30 176 aa14.27□□□□□ -0.12
RXRB-202ENST00000374685 P01737 135 aa14.27□□□□□ -0.13
RXRB-202ENST00000374685 CTSGP08311 255 aa14.27□□□□□ -0.13
RXRB-202ENST00000374685 PGLYRP4Q96LB8 373 aa14.27□□□□□ -0.13
RXRB-202ENST00000374685 BBC3Q96PG8 261 aaPredicted RBP14.27□□□□□ -0.13
RXRB-202ENST00000374685 PSG9Q00887 426 aa14.26□□□□□ -0.13
RXRB-202ENST00000374685 SLAQ13239 276 aa14.26□□□□□ -0.13
RXRB-202ENST00000374685 COL8A1P27658 744 aa14.26□□□□□ -0.13
RXRB-202ENST00000374685 FMC1Q96HJ9 113 aa14.26□□□□□ -0.13
RXRB-202ENST00000374685 IZUMO1RA6ND01 250 aa14.25□□□□□ -0.13
RXRB-202ENST00000374685 BMPR1BO00238 502 aa14.25□□□□□ -0.13
RXRB-202ENST00000374685 Q86TA4 180 aa14.25□□□□□ -0.13
RXRB-202ENST00000374685 C7orf69Q9H7B7 122 aa14.25□□□□□ -0.13
RXRB-202ENST00000374685 VWC2LB2RUY7 222 aa14.25□□□□□ -0.13
RXRB-202ENST00000374685 G3V4G9 280 aa14.25□□□□□ -0.13
RXRB-202ENST00000374685 SAP30O75446 220 aa14.25□□□□□ -0.13
RXRB-202ENST00000374685 HLA-DMBP28068 263 aa14.25□□□□□ -0.13
RXRB-202ENST00000374685 GRAMD2BQ96HH9 432 aa14.25□□□□□ -0.13
RXRB-202ENST00000374685 WI2-2373I1.2A0A1W2PRP0 233 aa14.24□□□□□ -0.13
RXRB-202ENST00000374685 PRSS57Q6UWY2 283 aa14.24□□□□□ -0.13
RXRB-202ENST00000374685 SIGLEC15Q6ZMC9 328 aa14.24□□□□□ -0.13
RXRB-202ENST00000374685 C10orf105Q8TEF2 133 aa14.24□□□□□ -0.13
RXRB-202ENST00000374685 CD5LO43866 347 aa14.24□□□□□ -0.13
RXRB-202ENST00000374685 LTAP01374 205 aa14.24□□□□□ -0.13
RXRB-202ENST00000374685 APCSP02743 223 aa14.24□□□□□ -0.13
RXRB-202ENST00000374685 NTF3P20783 257 aa14.24□□□□□ -0.13
RXRB-202ENST00000374685 GDF5OSQ5U4N7 250 aa14.24□□□□□ -0.13
RXRB-202ENST00000374685 PET117Q6UWS5 81 aa14.24□□□□□ -0.13
RXRB-202ENST00000374685 ZNF414Q96IQ9 312 aa14.24□□□□□ -0.13
RXRB-202ENST00000374685 TMEM14CQ9P0S9 112 aa14.24□□□□□ -0.13
RXRB-202ENST00000374685 KLF12Q9Y4X4 402 aa14.24□□□□□ -0.13
RXRB-202ENST00000374685 TMSB15BA0A087X1C1 80 aa14.23□□□□□ -0.13
RXRB-202ENST00000374685 NUDT3O95989 172 aa14.23□□□□□ -0.13
RXRB-202ENST00000374685 C12orf54Q6X4T0 127 aa14.23□□□□□ -0.13
RXRB-202ENST00000374685 CLUHP3Q96NS8 147 aa14.23□□□□□ -0.13
RXRB-202ENST00000374685 RPP21Q9H633 154 aaKnown RBP14.23□□□□□ -0.13
RXRB-202ENST00000374685 ST20Q9HBF5 79 aa14.23□□□□□ -0.13
RXRB-202ENST00000374685 SELENOKQ9Y6D0 94 aa14.23□□□□□ -0.13
RXRB-202ENST00000374685 CCDC168Q8NDH2 2452 aa14.23□□□□□ -0.13
RXRB-202ENST00000374685 IGKV2-40A0A087WW87 121 aaPredicted RBP14.23□□□□□ -0.13
RXRB-202ENST00000374685 IGHV1-69DA0A0B4J2H0 117 aa14.23□□□□□ -0.13
RXRB-202ENST00000374685 IGKV2D-40P01614 121 aaPredicted RBP14.23□□□□□ -0.13
RXRB-202ENST00000374685 IGHV1-69P01742 117 aa14.23□□□□□ -0.13
RXRB-202ENST00000374685 FER1L6-AS1Q8NA97 138 aa14.23□□□□□ -0.13
RXRB-202ENST00000374685 CREBBPQ92793 2442 aa14.23□□□□□ -0.13
RXRB-202ENST00000374685 FAM181BA6NEQ2 426 aa14.23□□□□□ -0.13
RXRB-202ENST00000374685 HLA-DQA1P01909 254 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 337.5 ms