RNA–Protein interactions for RNA: ENST00000374516.7

PHF1-202, Transcript of PHD finger protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PHF1, Length 2,330 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-202ENST00000374516 CEACAM3P40198 252 aa13.31□□□□□ -0.28
PHF1-202ENST00000374516 TMEM116Q8NCL8 245 aa13.31□□□□□ -0.28
PHF1-202ENST00000374516 SRSF12Q8WXF0 261 aaKnown RBP13.31□□□□□ -0.28
PHF1-202ENST00000374516 TRAV8-6A0A0B4J262 113 aa13.3□□□□□ -0.28
PHF1-202ENST00000374516 GAGE12BA1L429 117 aa13.3□□□□□ -0.28
PHF1-202ENST00000374516 TEX22C9J3V5 150 aa13.3□□□□□ -0.28
PHF1-202ENST00000374516 COX8AP10176 69 aa13.3□□□□□ -0.28
PHF1-202ENST00000374516 PVRIGQ6DKI7 326 aa13.3□□□□□ -0.28
PHF1-202ENST00000374516 Q86TA4 180 aa13.3□□□□□ -0.28
PHF1-202ENST00000374516 CNIH1O95406 144 aa13.3□□□□□ -0.28
PHF1-202ENST00000374516 IGLV2-11P01706 119 aa13.3□□□□□ -0.28
PHF1-202ENST00000374516 FOXE3Q13461 319 aa13.3□□□□□ -0.28
PHF1-202ENST00000374516 IGHV4-39P01824 125 aa13.29□□□□□ -0.28
PHF1-202ENST00000374516 PLP1P60201 277 aa13.29□□□□□ -0.28
PHF1-202ENST00000374516 C16orf54Q6UWD8 224 aa13.29□□□□□ -0.28
PHF1-202ENST00000374516 PRNTQ86SH4 94 aa13.29□□□□□ -0.28
PHF1-202ENST00000374516 ZNF747Q9BV97 191 aa13.29□□□□□ -0.28
PHF1-202ENST00000374516 OTORQ9NRC9 128 aa13.29□□□□□ -0.28
PHF1-202ENST00000374516 AP5S1Q9NUS5 200 aa13.29□□□□□ -0.28
PHF1-202ENST00000374516 PEF1Q9UBV8 284 aaKnown RBP13.29□□□□□ -0.28
PHF1-202ENST00000374516 HOXB4P17483 251 aaPredicted RBP13.29□□□□□ -0.28
PHF1-202ENST00000374516 LMO4P61968 165 aa13.29□□□□□ -0.28
PHF1-202ENST00000374516 C1orf122Q6ZSJ8 110 aa13.29□□□□□ -0.28
PHF1-202ENST00000374516 C2orf91Q6ZV80 131 aa13.29□□□□□ -0.28
PHF1-202ENST00000374516 RNF5Q99942 180 aa13.29□□□□□ -0.28
PHF1-202ENST00000374516 A0A1B0GUT8 65 aa13.28□□□□□ -0.28
PHF1-202ENST00000374516 ZNF785A8K8V0 405 aa13.28□□□□□ -0.28
PHF1-202ENST00000374516 NBR2O15453 112 aa13.28□□□□□ -0.28
PHF1-202ENST00000374516 SNAI2O43623 268 aa13.28□□□□□ -0.28
PHF1-202ENST00000374516 PAX2Q02962 417 aa13.28□□□□□ -0.28
PHF1-202ENST00000374516 GOLT1AQ6ZVE7 132 aa13.28□□□□□ -0.28
PHF1-202ENST00000374516 Q71RC1 249 aaPredicted RBP13.28□□□□□ -0.28
PHF1-202ENST00000374516 SMIM15Q7Z3B0 74 aa13.28□□□□□ -0.28
PHF1-202ENST00000374516 BPIFA4PQ86YQ2 179 aa13.28□□□□□ -0.28
PHF1-202ENST00000374516 EXOC3-AS1Q8N2X6 119 aa13.28□□□□□ -0.28
PHF1-202ENST00000374516 SIRPDQ9H106 197 aa13.28□□□□□ -0.28
PHF1-202ENST00000374516 LRRK2Q5S007 2527 aa13.27□□□□□ -0.28
PHF1-202ENST00000374516 FAM208BQ5VWN6 2430 aa13.27□□□□□ -0.28
PHF1-202ENST00000374516 C7orf71A4D174 169 aa13.27□□□□□ -0.28
PHF1-202ENST00000374516 ARMS2P0C7Q2 107 aa13.27□□□□□ -0.28
PHF1-202ENST00000374516 HIGD1AQ9Y241 93 aa13.27□□□□□ -0.28
PHF1-202ENST00000374516 F11RQ9Y624 299 aaKnown RBP13.27□□□□□ -0.28
PHF1-202ENST00000374516 NCR2O95944 276 aa13.27□□□□□ -0.29
PHF1-202ENST00000374516 RIGQ13278 110 aa13.27□□□□□ -0.29
PHF1-202ENST00000374516 NCBP2LA6PVI3 153 aaKnown RBP13.26□□□□□ -0.29
PHF1-202ENST00000374516 IGLC1P0CG04 106 aa13.26□□□□□ -0.29
PHF1-202ENST00000374516 CSN1S1P47710 185 aa13.26□□□□□ -0.29
PHF1-202ENST00000374516 PRSS3P2Q8NHM4 247 aa13.26□□□□□ -0.29
PHF1-202ENST00000374516 BBC3Q96PG8 261 aaPredicted RBP13.26□□□□□ -0.29
PHF1-202ENST00000374516 TMEM97Q5BJF2 176 aa13.25□□□□□ -0.29
PHF1-202ENST00000374516 OR10AG1Q8NH19 301 aa13.25□□□□□ -0.29
PHF1-202ENST00000374516 TMEM14CQ9P0S9 112 aa13.25□□□□□ -0.29
PHF1-202ENST00000374516 K7ERU9 68 aa13.25□□□□□ -0.29
PHF1-202ENST00000374516 SEC11AP67812 179 aa13.25□□□□□ -0.29
PHF1-202ENST00000374516 FA2HQ7L5A8 372 aa13.25□□□□□ -0.29
PHF1-202ENST00000374516 ZC2HC1AQ96GY0 325 aa13.25□□□□□ -0.29
PHF1-202ENST00000374516 SLC25A39Q9BZJ4 359 aaPredicted RBP13.25□□□□□ -0.29
PHF1-202ENST00000374516 TRBV6-1A0A0K0K1D8 114 aa13.24□□□□□ -0.29
PHF1-202ENST00000374516 LYZP61626 148 aa13.24□□□□□ -0.29
PHF1-202ENST00000374516 GATD1Q8NB37 220 aa13.24□□□□□ -0.29
PHF1-202ENST00000374516 NPBQ8NG41 125 aa13.24□□□□□ -0.29
PHF1-202ENST00000374516 CCL19Q99731 98 aa13.24□□□□□ -0.29
PHF1-202ENST00000374516 KLF17Q5JT82 389 aaPredicted RBP13.24□□□□□ -0.29
PHF1-202ENST00000374516 CSTL1Q9H114 145 aa13.24□□□□□ -0.29
PHF1-202ENST00000374516 GAGE10A6NGK3 116 aa13.23□□□□□ -0.29
PHF1-202ENST00000374516 NDUFA3O95167 84 aa13.23□□□□□ -0.29
PHF1-202ENST00000374516 FAM106CPP0CH98 169 aa13.23□□□□□ -0.29
PHF1-202ENST00000374516 C5orf64Q2M2E5 130 aa13.23□□□□□ -0.29
PHF1-202ENST00000374516 FAM106AQ4KMX7 169 aa13.23□□□□□ -0.29
PHF1-202ENST00000374516 CCDC144NLQ6NUI1 221 aa13.23□□□□□ -0.29
PHF1-202ENST00000374516 FGF6P10767 208 aa13.23□□□□□ -0.29
PHF1-202ENST00000374516 A0A1B0GW15 77 aa13.22□□□□□ -0.29
PHF1-202ENST00000374516 IFI27P40305 119 aaPredicted RBP13.22□□□□□ -0.29
PHF1-202ENST00000374516 DPF1Q92782 380 aa13.22□□□□□ -0.29
PHF1-202ENST00000374516 ASCL2Q99929 193 aa13.22□□□□□ -0.29
PHF1-202ENST00000374516 MINOS1Q5TGZ0 78 aa13.22□□□□□ -0.29
PHF1-202ENST00000374516 RABAC1Q9UI14 185 aa13.22□□□□□ -0.29
PHF1-202ENST00000374516 MINOS1-NBL1R4GNA1 71 aa13.22□□□□□ -0.29
PHF1-202ENST00000374516 ABCA2Q9BZC7 2435 aa13.21□□□□□ -0.29
PHF1-202ENST00000374516 A0A096LNJ9 63 aa13.21□□□□□ -0.29
PHF1-202ENST00000374516 I3L2K1 104 aa13.21□□□□□ -0.29
PHF1-202ENST00000374516 SAA4P35542 130 aa13.21□□□□□ -0.29
PHF1-202ENST00000374516 CRIP1P50238 77 aa13.21□□□□□ -0.29
PHF1-202ENST00000374516 UBE2E1P51965 193 aa13.21□□□□□ -0.29
PHF1-202ENST00000374516 PIP4P2Q8N4L2 257 aa13.21□□□□□ -0.29
PHF1-202ENST00000374516 TMEM75Q8N9X5 138 aa13.21□□□□□ -0.29
PHF1-202ENST00000374516 C17orf77Q96MU5 243 aa13.21□□□□□ -0.29
PHF1-202ENST00000374516 S4R3C0 116 aa13.21□□□□□ -0.29
PHF1-202ENST00000374516 POLQO75417 2590 aa13.21□□□□□ -0.3
PHF1-202ENST00000374516 TMEM11P17152 192 aa13.21□□□□□ -0.3
PHF1-202ENST00000374516 LOXL1Q08397 574 aaPredicted RBP13.21□□□□□ -0.3
PHF1-202ENST00000374516 UFSP1Q6NVU6 142 aa13.21□□□□□ -0.3
PHF1-202ENST00000374516 OR8A1Q8NGG7 326 aa13.21□□□□□ -0.3
PHF1-202ENST00000374516 NRGNQ92686 78 aa13.21□□□□□ -0.3
PHF1-202ENST00000374516 AJUBAQ96IF1 538 aa13.21□□□□□ -0.3
PHF1-202ENST00000374516 TPPP3Q9BW30 176 aa13.21□□□□□ -0.3
PHF1-202ENST00000374516 TRBV19A0A075B6N1 114 aa13.2□□□□□ -0.3
PHF1-202ENST00000374516 IGHV4-61A0A0C4DH41 118 aa13.2□□□□□ -0.3
PHF1-202ENST00000374516 NDPQ00604 133 aa13.2□□□□□ -0.3
PHF1-202ENST00000374516 PSG8Q9UQ74 426 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 82.1 ms