RNA–Protein interactions for RNA: ENST00000374198.4

PRPF4-201, Transcript of pre-mRNA processing factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRPF4, Length 2,787 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-201ENST00000374198 MAGEA5P43359 124 aa10.22□□□□□ -0.77
PRPF4-201ENST00000374198 CRIP1P50238 77 aa10.22□□□□□ -0.77
PRPF4-201ENST00000374198 SUB1P53999 127 aaKnown RBP eCLIP10.22□□□□□ -0.77
PRPF4-201ENST00000374198 LYZL1Q6UWQ5 148 aa10.22□□□□□ -0.77
PRPF4-201ENST00000374198 FZR1Q9UM11 496 aa10.22□□□□□ -0.77
PRPF4-201ENST00000374198 ASPMQ8IZT6 3477 aa10.22□□□□□ -0.77
PRPF4-201ENST00000374198 IGHV3OR15-7A0A075B7D8 119 aa10.22□□□□□ -0.77
PRPF4-201ENST00000374198 SMKR1H3BMG3 65 aa10.22□□□□□ -0.77
PRPF4-201ENST00000374198 DPM2O94777 84 aa10.22□□□□□ -0.77
PRPF4-201ENST00000374198 ZFAND6Q6FIF0 208 aa10.22□□□□□ -0.77
PRPF4-201ENST00000374198 ASCL2Q99929 193 aa10.22□□□□□ -0.77
PRPF4-201ENST00000374198 FCER1GP30273 86 aa10.21□□□□□ -0.77
PRPF4-201ENST00000374198 TMEM158Q8WZ71 300 aa10.21□□□□□ -0.77
PRPF4-201ENST00000374198 RAB9BQ9NP90 201 aa10.21□□□□□ -0.77
PRPF4-201ENST00000374198 SRRM5B3KS81 715 aa10.21□□□□□ -0.78
PRPF4-201ENST00000374198 RUSC1-AS1Q66K80 236 aa10.21□□□□□ -0.78
PRPF4-201ENST00000374198 MORN3Q6PF18 240 aaPredicted RBP10.21□□□□□ -0.78
PRPF4-201ENST00000374198 DLX4Q92988 240 aaPredicted RBP10.21□□□□□ -0.78
PRPF4-201ENST00000374198 FAM173AQ9BQD7 235 aa10.21□□□□□ -0.78
PRPF4-201ENST00000374198 AHCTF1Q8WYP5 2266 aa10.2□□□□□ -0.78
PRPF4-201ENST00000374198 CGB1A6NKQ9 187 aa10.2□□□□□ -0.78
PRPF4-201ENST00000374198 LEPP41159 167 aa10.2□□□□□ -0.78
PRPF4-201ENST00000374198 TMEM75Q8N9X5 138 aa10.2□□□□□ -0.78
PRPF4-201ENST00000374198 PPDPFLQ8WWR9 84 aa10.2□□□□□ -0.78
PRPF4-201ENST00000374198 TRGV9Q99603 122 aa10.2□□□□□ -0.78
PRPF4-201ENST00000374198 FREM2Q5SZK8 3169 aa10.2□□□□□ -0.78
PRPF4-201ENST00000374198 HEATR1Q9H583 2144 aaKnown RBP10.2□□□□□ -0.78
PRPF4-201ENST00000374198 TRBV7-3A0A075B6L6 115 aa10.2□□□□□ -0.78
PRPF4-201ENST00000374198 RBP4P02753 201 aa10.2□□□□□ -0.78
PRPF4-201ENST00000374198 TWIST1Q15672 202 aa10.2□□□□□ -0.78
PRPF4-201ENST00000374198 TEX29Q8N6K0 151 aa10.2□□□□□ -0.78
PRPF4-201ENST00000374198 CARD19Q96LW7 228 aa10.2□□□□□ -0.78
PRPF4-201ENST00000374198 HARBI1Q96MB7 349 aa10.2□□□□□ -0.78
PRPF4-201ENST00000374198 FOXC2Q99958 501 aa10.2□□□□□ -0.78
PRPF4-201ENST00000374198 VCX2Q9H322 139 aa10.2□□□□□ -0.78
PRPF4-201ENST00000374198 ZNF71Q9NQZ8 489 aaPredicted RBP10.2□□□□□ -0.78
PRPF4-201ENST00000374198 PKD1L2Q7Z442 2459 aa10.2□□□□□ -0.78
PRPF4-201ENST00000374198 LINC01546A6NGU7 62 aa10.2□□□□□ -0.78
PRPF4-201ENST00000374198 FAM90A27PA6NNH2 459 aa10.2□□□□□ -0.78
PRPF4-201ENST00000374198 NHLRC4P0CG21 123 aaPredicted RBP10.2□□□□□ -0.78
PRPF4-201ENST00000374198 C10orf55Q5SWW7 151 aa10.2□□□□□ -0.78
PRPF4-201ENST00000374198 HOXA3O43365 443 aaPredicted RBP10.19□□□□□ -0.78
PRPF4-201ENST00000374198 THBDP07204 575 aa10.19□□□□□ -0.78
PRPF4-201ENST00000374198 MEOX1P50221 254 aa10.19□□□□□ -0.78
PRPF4-201ENST00000374198 MOGAT3Q86VF5 341 aa10.19□□□□□ -0.78
PRPF4-201ENST00000374198 TMEM160Q9NX00 188 aa10.19□□□□□ -0.78
PRPF4-201ENST00000374198 DMXL2Q8TDJ6 3036 aa10.19□□□□□ -0.78
PRPF4-201ENST00000374198 ATP5LO75964 103 aa10.19□□□□□ -0.78
PRPF4-201ENST00000374198 LINC01559Q495D7 138 aa10.19□□□□□ -0.78
PRPF4-201ENST00000374198 ZNRD1Q9P1U0 126 aa10.19□□□□□ -0.78
PRPF4-201ENST00000374198 PCSK5Q92824 1860 aa10.19□□□□□ -0.78
PRPF4-201ENST00000374198 TRAV40A0A0B4J280 105 aa10.18□□□□□ -0.78
PRPF4-201ENST00000374198 TNFRSF1AP19438 455 aa10.18□□□□□ -0.78
PRPF4-201ENST00000374198 UCNP55089 124 aa10.18□□□□□ -0.78
PRPF4-201ENST00000374198 OR10X1Q8NGY0 326 aa10.18□□□□□ -0.78
PRPF4-201ENST00000374198 PTH2Q96A98 100 aa10.18□□□□□ -0.78
PRPF4-201ENST00000374198 HES7Q9BYE0 225 aa10.18□□□□□ -0.78
PRPF4-201ENST00000374198 MAP1LC3AQ9H492 121 aa10.18□□□□□ -0.78
PRPF4-201ENST00000374198 TMSB15BA0A087X1C1 80 aa10.18□□□□□ -0.78
PRPF4-201ENST00000374198 IL4P05112 153 aa10.18□□□□□ -0.78
PRPF4-201ENST00000374198 RPL32P62910 135 aaKnown RBP10.18□□□□□ -0.78
PRPF4-201ENST00000374198 TEN1Q86WV5 123 aa10.18□□□□□ -0.78
PRPF4-201ENST00000374198 SLC25A39Q9BZJ4 359 aaPredicted RBP10.18□□□□□ -0.78
PRPF4-201ENST00000374198 TMEM14CQ9P0S9 112 aa10.18□□□□□ -0.78
PRPF4-201ENST00000374198 HIGD1AQ9Y241 93 aa10.18□□□□□ -0.78
PRPF4-201ENST00000374198 TTTY12Q9BZ98 90 aa10.17□□□□□ -0.78
PRPF4-201ENST00000374198 SMIM20Q8N5G0 67 aa10.17□□□□□ -0.78
PRPF4-201ENST00000374198 TMEM167AQ8TBQ9 72 aa10.17□□□□□ -0.78
PRPF4-201ENST00000374198 CITED1Q99966 193 aa10.17□□□□□ -0.78
PRPF4-201ENST00000374198 LINC01619G3V211 115 aa10.16□□□□□ -0.78
PRPF4-201ENST00000374198 LYZL6O75951 148 aa10.16□□□□□ -0.78
PRPF4-201ENST00000374198 CNIH1O95406 144 aa10.16□□□□□ -0.78
PRPF4-201ENST00000374198 PRB4P10163 310 aaPredicted RBP10.16□□□□□ -0.78
PRPF4-201ENST00000374198 IGHV1-2P23083 117 aa10.16□□□□□ -0.78
PRPF4-201ENST00000374198 PSMB2P49721 201 aa10.16□□□□□ -0.78
PRPF4-201ENST00000374198 C6orf15Q6UXA7 325 aaPredicted RBP10.16□□□□□ -0.78
PRPF4-201ENST00000374198 TMEM133Q9H2Q1 129 aa10.16□□□□□ -0.78
PRPF4-201ENST00000374198 MRPL35Q9NZE8 188 aaKnown RBP10.16□□□□□ -0.78
PRPF4-201ENST00000374198 AGRNO00468 2067 aa10.16□□□□□ -0.78
PRPF4-201ENST00000374198 KMT2BQ9UMN6 2715 aaPredicted RBP10.16□□□□□ -0.78
PRPF4-201ENST00000374198 ZNF688P0C7X2 276 aa10.16□□□□□ -0.78
PRPF4-201ENST00000374198 MZT1Q08AG7 82 aa10.16□□□□□ -0.78
PRPF4-201ENST00000374198 C8orf49Q96NF6 230 aa10.16□□□□□ -0.78
PRPF4-201ENST00000374198 MRPL20Q9BYC9 149 aaKnown RBP10.16□□□□□ -0.78
PRPF4-201ENST00000374198 SRD5A1P18405 259 aa10.15□□□□□ -0.78
PRPF4-201ENST00000374198 NXT2Q9NPJ8 142 aaKnown RBP10.15□□□□□ -0.78
PRPF4-201ENST00000374198 CELSR3Q9NYQ7 3312 aa10.15□□□□□ -0.78
PRPF4-201ENST00000374198 PTPRQQ9UMZ3 2332 aa10.15□□□□□ -0.78
PRPF4-201ENST00000374198 GAGE12JA6NER3 117 aa10.15□□□□□ -0.78
PRPF4-201ENST00000374198 LINC01548A6NM66 108 aa10.15□□□□□ -0.78
PRPF4-201ENST00000374198 NCBP2LA6PVI3 153 aaKnown RBP10.15□□□□□ -0.78
PRPF4-201ENST00000374198 GAGE7O76087 117 aa10.15□□□□□ -0.78
PRPF4-201ENST00000374198 GAGE12FP0CL80 117 aa10.15□□□□□ -0.78
PRPF4-201ENST00000374198 GAGE12GP0CL81 117 aa10.15□□□□□ -0.78
PRPF4-201ENST00000374198 GAGE12IP0CL82 117 aa10.15□□□□□ -0.78
PRPF4-201ENST00000374198 CCL11P51671 97 aa10.15□□□□□ -0.78
PRPF4-201ENST00000374198 GAGE4Q13068 117 aa10.15□□□□□ -0.78
PRPF4-201ENST00000374198 ZNF833PQ6ZTB9 187 aa10.15□□□□□ -0.78
PRPF4-201ENST00000374198 RPEQ96AT9 228 aa10.15□□□□□ -0.78
PRPF4-201ENST00000374198 SRSF8Q9BRL6 282 aaKnown RBP10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 97.9 ms