RNA–Protein interactions for RNA: ENST00000373887.7

TRAF1-201, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 6,324 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-201ENST00000373887 NTF4P34130 210 aa11.58□□□□□ -0.56
TRAF1-201ENST00000373887 TP53TG1Q9Y2A0 90 aa11.58□□□□□ -0.56
TRAF1-201ENST00000373887 K7EM74 188 aa11.58□□□□□ -0.56
TRAF1-201ENST00000373887 C8orf49Q96NF6 230 aa11.58□□□□□ -0.56
TRAF1-201ENST00000373887 ACACAQ13085 2346 aa11.58□□□□□ -0.56
TRAF1-201ENST00000373887 DEFB131AP59861 70 aa11.58□□□□□ -0.56
TRAF1-201ENST00000373887 MINOS1Q5TGZ0 78 aa11.58□□□□□ -0.56
TRAF1-201ENST00000373887 PRSS57Q6UWY2 283 aa11.58□□□□□ -0.56
TRAF1-201ENST00000373887 MINOS1-NBL1R4GNA1 71 aa11.58□□□□□ -0.56
TRAF1-201ENST00000373887 CYTL1Q9NRR1 136 aa11.57□□□□□ -0.56
TRAF1-201ENST00000373887 XCL2Q9UBD3 114 aa11.57□□□□□ -0.56
TRAF1-201ENST00000373887 GATA4P43694 442 aa11.57□□□□□ -0.56
TRAF1-201ENST00000373887 IGHV3-38A0A0C4DH36 116 aa11.57□□□□□ -0.56
TRAF1-201ENST00000373887 M0R1W7 72 aa11.57□□□□□ -0.56
TRAF1-201ENST00000373887 MLANAQ16655 118 aa11.57□□□□□ -0.56
TRAF1-201ENST00000373887 RPP25LQ8N5L8 163 aaKnown RBP11.57□□□□□ -0.56
TRAF1-201ENST00000373887 THAP8Q8NA92 274 aa11.57□□□□□ -0.56
TRAF1-201ENST00000373887 KIF26BQ2KJY2 2108 aa11.57□□□□□ -0.56
TRAF1-201ENST00000373887 LHBP01229 141 aa11.57□□□□□ -0.56
TRAF1-201ENST00000373887 FREM3P0C091 2139 aa11.57□□□□□ -0.56
TRAF1-201ENST00000373887 IGKV1-5P01602 117 aa11.56□□□□□ -0.56
TRAF1-201ENST00000373887 LINC00479Q96M42 142 aa11.56□□□□□ -0.56
TRAF1-201ENST00000373887 AKAP6Q13023 2319 aa11.56□□□□□ -0.56
TRAF1-201ENST00000373887 TMEM213A2RRL7 107 aa11.56□□□□□ -0.56
TRAF1-201ENST00000373887 C5orf64Q2M2E5 130 aa11.56□□□□□ -0.56
TRAF1-201ENST00000373887 CR1LQ2VPA4 569 aa11.56□□□□□ -0.56
TRAF1-201ENST00000373887 C1QTNF4Q9BXJ3 329 aa11.56□□□□□ -0.56
TRAF1-201ENST00000373887 CLPSL1A2RUU4 121 aa11.56□□□□□ -0.56
TRAF1-201ENST00000373887 OVOL3O00110 214 aa11.56□□□□□ -0.56
TRAF1-201ENST00000373887 MMP23AO75900 390 aa11.56□□□□□ -0.56
TRAF1-201ENST00000373887 ARMS2P0C7Q2 107 aa11.56□□□□□ -0.56
TRAF1-201ENST00000373887 DUX4L9Q6RFH8 374 aaPredicted RBP11.56□□□□□ -0.56
TRAF1-201ENST00000373887 TRPT1Q86TN4 253 aaKnown RBP11.56□□□□□ -0.56
TRAF1-201ENST00000373887 SIP14410 1827 aa11.56□□□□□ -0.56
TRAF1-201ENST00000373887 FRMPD3Q5JV73 1810 aa11.56□□□□□ -0.56
TRAF1-201ENST00000373887 hADV29S1A0JD25 119 aa11.55□□□□□ -0.56
TRAF1-201ENST00000373887 WISP1O95388 367 aa11.55□□□□□ -0.56
TRAF1-201ENST00000373887 PLXNA3P51805 1871 aa11.55□□□□□ -0.56
TRAF1-201ENST00000373887 WDR81Q562E7 1941 aa11.55□□□□□ -0.56
TRAF1-201ENST00000373887 LINC00473A8K010 186 aa11.55□□□□□ -0.56
TRAF1-201ENST00000373887 FAM231BA6NCW3 169 aa11.55□□□□□ -0.56
TRAF1-201ENST00000373887 RS1O15537 224 aa11.55□□□□□ -0.56
TRAF1-201ENST00000373887 CRLF1O75462 422 aa11.55□□□□□ -0.56
TRAF1-201ENST00000373887 SCRT2Q9NQ03 307 aa11.55□□□□□ -0.56
TRAF1-201ENST00000373887 PLXNA4Q9HCM2 1894 aa11.55□□□□□ -0.56
TRAF1-201ENST00000373887 KIAA1671Q9BY89 1806 aa11.55□□□□□ -0.56
TRAF1-201ENST00000373887 A0A096LPF7 62 aa11.55□□□□□ -0.56
TRAF1-201ENST00000373887 GRNP28799 593 aaKnown RBP11.55□□□□□ -0.56
TRAF1-201ENST00000373887 RIF1Q5UIP0 2472 aaKnown RBP11.55□□□□□ -0.56
TRAF1-201ENST00000373887 Q86TA4 180 aa11.55□□□□□ -0.56
TRAF1-201ENST00000373887 RNF166Q96A37 237 aaPredicted RBP11.55□□□□□ -0.56
TRAF1-201ENST00000373887 CFHR2P36980 270 aa11.54□□□□□ -0.56
TRAF1-201ENST00000373887 SPINK13Q1W4C9 94 aa11.54□□□□□ -0.56
TRAF1-201ENST00000373887 ZNF664Q8N3J9 261 aa11.54□□□□□ -0.56
TRAF1-201ENST00000373887 GBF1Q92538 1859 aa11.54□□□□□ -0.56
TRAF1-201ENST00000373887 TRAV26-2A0A0B4J265 109 aa11.54□□□□□ -0.56
TRAF1-201ENST00000373887 FAM223BA6NKX1 122 aa11.54□□□□□ -0.56
TRAF1-201ENST00000373887 DAD1P61803 113 aa11.54□□□□□ -0.56
TRAF1-201ENST00000373887 GAGE6Q13070 117 aa11.54□□□□□ -0.56
TRAF1-201ENST00000373887 FAM223AQ8IWN6 122 aa11.54□□□□□ -0.56
TRAF1-201ENST00000373887 PRB2P02812 416 aaPredicted RBP11.54□□□□□ -0.56
TRAF1-201ENST00000373887 SUPT4H1P63272 117 aaKnown RBP11.54□□□□□ -0.56
TRAF1-201ENST00000373887 HS3ST6Q96QI5 342 aa11.54□□□□□ -0.56
TRAF1-201ENST00000373887 RNF114Q9Y508 228 aa11.54□□□□□ -0.56
TRAF1-201ENST00000373887 C5orf47Q569G3 176 aa11.54□□□□□ -0.56
TRAF1-201ENST00000373887 Q6P435 159 aa11.54□□□□□ -0.56
TRAF1-201ENST00000373887 CLPSL2Q6UWE3 100 aa11.54□□□□□ -0.56
TRAF1-201ENST00000373887 TINCRA0A1B0GVN0 87 aa11.53□□□□□ -0.56
TRAF1-201ENST00000373887 PYY3Q5JQD4 70 aa11.53□□□□□ -0.56
TRAF1-201ENST00000373887 HEATR1Q9H583 2144 aaKnown RBP11.53□□□□□ -0.56
TRAF1-201ENST00000373887 UBL5Q9BZL1 73 aa11.53□□□□□ -0.56
TRAF1-201ENST00000373887 SIGLEC9Q9Y336 463 aa11.53□□□□□ -0.56
TRAF1-201ENST00000373887 TRBV25-1A0A075B6N4 114 aa11.53□□□□□ -0.56
TRAF1-201ENST00000373887 A0A1B0GUS0 222 aa11.53□□□□□ -0.56
TRAF1-201ENST00000373887 EREGO14944 169 aa11.53□□□□□ -0.56
TRAF1-201ENST00000373887 WT1P19544 449 aaPredicted RBP11.53□□□□□ -0.56
TRAF1-201ENST00000373887 FBLN5Q9UBX5 448 aa11.53□□□□□ -0.56
TRAF1-201ENST00000373887 TSSC4Q9Y5U2 329 aaPredicted RBP11.53□□□□□ -0.56
TRAF1-201ENST00000373887 DIDO1Q9BTC0 2240 aaKnown RBP11.53□□□□□ -0.56
TRAF1-201ENST00000373887 FANCMQ8IYD8 2048 aa11.52□□□□□ -0.56
TRAF1-201ENST00000373887 USMG5Q96IX5 58 aa11.52□□□□□ -0.56
TRAF1-201ENST00000373887 TRACP01848 142 aa11.52□□□□□ -0.56
TRAF1-201ENST00000373887 PAX9P55771 341 aa11.52□□□□□ -0.56
TRAF1-201ENST00000373887 KLF5Q13887 457 aaPredicted RBP11.52□□□□□ -0.56
TRAF1-201ENST00000373887 NEGR1Q7Z3B1 354 aa11.52□□□□□ -0.56
TRAF1-201ENST00000373887 MRPL27Q9P0M9 148 aaKnown RBP11.52□□□□□ -0.56
TRAF1-201ENST00000373887 TAL2Q16559 108 aa11.52□□□□□ -0.57
TRAF1-201ENST00000373887 AZU1P20160 251 aa11.52□□□□□ -0.57
TRAF1-201ENST00000373887 DSCR8Q96T75 97 aa11.52□□□□□ -0.57
TRAF1-201ENST00000373887 IGKV1-16P04430 117 aa11.52□□□□□ -0.57
TRAF1-201ENST00000373887 GAGE7O76087 117 aa11.51□□□□□ -0.57
TRAF1-201ENST00000373887 GAGE12FP0CL80 117 aa11.51□□□□□ -0.57
TRAF1-201ENST00000373887 GAGE12GP0CL81 117 aa11.51□□□□□ -0.57
TRAF1-201ENST00000373887 GAGE12IP0CL82 117 aa11.51□□□□□ -0.57
TRAF1-201ENST00000373887 PIP4P1Q86T03 277 aa11.51□□□□□ -0.57
TRAF1-201ENST00000373887 PROK2Q9HC23 129 aa11.51□□□□□ -0.57
TRAF1-201ENST00000373887 DAZ1Q9NQZ3 744 aaKnown RBP11.51□□□□□ -0.57
TRAF1-201ENST00000373887 DEFB105AQ8NG35 78 aa11.51□□□□□ -0.57
TRAF1-201ENST00000373887 PHF3Q92576 2039 aaKnown RBP11.51□□□□□ -0.57
TRAF1-201ENST00000373887 TMEM14EPQ6UXP3 125 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms