RNA–Protein interactions for RNA: ENST00000373700.8

HERC4-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HERC4, Length 3,905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-202ENST00000373700 RNF182Q8N6D2 247 aa6.2□□□□□ -1.42
HERC4-202ENST00000373700 A0A1W2PS18 150 aa6.2□□□□□ -1.42
HERC4-202ENST00000373700 hDV102S1A0JD36 115 aa6.2□□□□□ -1.42
HERC4-202ENST00000373700 P0C879 139 aa6.2□□□□□ -1.42
HERC4-202ENST00000373700 ERCC8Q13216 396 aa6.2□□□□□ -1.42
HERC4-202ENST00000373700 PATE2Q6UY27 113 aa6.2□□□□□ -1.42
HERC4-202ENST00000373700 SCGB1D4Q6XE38 83 aa6.2□□□□□ -1.42
HERC4-202ENST00000373700 ZNF502Q8TBZ5 544 aa6.2□□□□□ -1.42
HERC4-202ENST00000373700 POLR3KQ9Y2Y1 108 aaPredicted RBP6.2□□□□□ -1.42
HERC4-202ENST00000373700 ZFP36P26651 326 aaKnown RBP6.2□□□□□ -1.42
HERC4-202ENST00000373700 FXYD5Q96DB9 178 aa6.2□□□□□ -1.42
HERC4-202ENST00000373700 TMEM160Q9NX00 188 aa6.2□□□□□ -1.42
HERC4-202ENST00000373700 ZFP30Q9Y2G7 519 aa6.2□□□□□ -1.42
HERC4-202ENST00000373700 KLF2Q9Y5W3 355 aaPredicted RBP6.2□□□□□ -1.42
HERC4-202ENST00000373700 TRAV8-6A0A0B4J262 113 aa6.19□□□□□ -1.42
HERC4-202ENST00000373700 FABP5P3A8MUU1 101 aa6.19□□□□□ -1.42
HERC4-202ENST00000373700 GCSHP23434 173 aa6.19□□□□□ -1.42
HERC4-202ENST00000373700 TDRG1Q3Y452 100 aa6.19□□□□□ -1.42
HERC4-202ENST00000373700 ORMDL3Q8N138 153 aa6.19□□□□□ -1.42
HERC4-202ENST00000373700 LAMTOR2Q9Y2Q5 125 aa6.19□□□□□ -1.42
HERC4-202ENST00000373700 IGHV4-30-2A0A087WSY4 118 aa6.19□□□□□ -1.42
HERC4-202ENST00000373700 D6R8Y8 96 aa6.19□□□□□ -1.42
HERC4-202ENST00000373700 FNDC10F2Z333 226 aa6.19□□□□□ -1.42
HERC4-202ENST00000373700 IGLC1P0CG04 106 aa6.19□□□□□ -1.42
HERC4-202ENST00000373700 C1orf194Q5T5A4 169 aa6.19□□□□□ -1.42
HERC4-202ENST00000373700 AMN1Q8IY45 258 aa6.19□□□□□ -1.42
HERC4-202ENST00000373700 C8orf49Q96NF6 230 aa6.19□□□□□ -1.42
HERC4-202ENST00000373700 NCOR1P1Q9H4R4 102 aa6.19□□□□□ -1.42
HERC4-202ENST00000373700 TMEM213A2RRL7 107 aa6.19□□□□□ -1.42
HERC4-202ENST00000373700 A8MWP6 167 aa6.19□□□□□ -1.42
HERC4-202ENST00000373700 IGHV4-39P01824 125 aa6.19□□□□□ -1.42
HERC4-202ENST00000373700 TYMSP04818 313 aa6.19□□□□□ -1.42
HERC4-202ENST00000373700 HLA-DMBP28068 263 aa6.19□□□□□ -1.42
HERC4-202ENST00000373700 RNASE4P34096 147 aaKnown RBP6.19□□□□□ -1.42
HERC4-202ENST00000373700 RPL24P83731 157 aaKnown RBP6.19□□□□□ -1.42
HERC4-202ENST00000373700 C18orf32Q8TCD1 76 aa6.19□□□□□ -1.42
HERC4-202ENST00000373700 ZNF414Q96IQ9 312 aa6.19□□□□□ -1.42
HERC4-202ENST00000373700 TACC2O95359 2948 aa6.19□□□□□ -1.42
HERC4-202ENST00000373700 ATP6V0E1O15342 81 aa6.18□□□□□ -1.42
HERC4-202ENST00000373700 CGB3P0DN86 165 aa6.18□□□□□ -1.42
HERC4-202ENST00000373700 CGB7P0DN87 165 aa6.18□□□□□ -1.42
HERC4-202ENST00000373700 OR10J3Q5JRS4 329 aa6.18□□□□□ -1.42
HERC4-202ENST00000373700 ZNF562Q6V9R5 426 aa6.18□□□□□ -1.42
HERC4-202ENST00000373700 TMEM75Q8N9X5 138 aa6.18□□□□□ -1.42
HERC4-202ENST00000373700 YAE1D1Q9NRH1 226 aa6.18□□□□□ -1.42
HERC4-202ENST00000373700 BEX4Q9NWD9 120 aaPredicted RBP6.18□□□□□ -1.42
HERC4-202ENST00000373700 LY96Q9Y6Y9 160 aa6.18□□□□□ -1.42
HERC4-202ENST00000373700 DSCAML1Q8TD84 2053 aa6.18□□□□□ -1.42
HERC4-202ENST00000373700 FLNCQ14315 2725 aa6.18□□□□□ -1.42
HERC4-202ENST00000373700 FAM106AQ4KMX7 169 aa6.18□□□□□ -1.42
HERC4-202ENST00000373700 TMEM97Q5BJF2 176 aa6.18□□□□□ -1.42
HERC4-202ENST00000373700 Q86TA4 180 aa6.18□□□□□ -1.42
HERC4-202ENST00000373700 BEND2Q8NDZ0 799 aa6.18□□□□□ -1.42
HERC4-202ENST00000373700 KAAG1Q9UBP8 84 aa6.18□□□□□ -1.42
HERC4-202ENST00000373700 FAM181BA6NEQ2 426 aa6.18□□□□□ -1.42
HERC4-202ENST00000373700 TOMM40O96008 361 aa6.18□□□□□ -1.42
HERC4-202ENST00000373700 CACNG7P62955 275 aa6.18□□□□□ -1.42
HERC4-202ENST00000373700 C11orf52Q96A22 123 aa6.18□□□□□ -1.42
HERC4-202ENST00000373700 NAA38Q9BRA0 125 aaKnown RBP6.18□□□□□ -1.42
HERC4-202ENST00000373700 SHANK2-AS3Q9BTD1 123 aa6.18□□□□□ -1.42
HERC4-202ENST00000373700 LRBAP50851 2863 aa6.18□□□□□ -1.42
HERC4-202ENST00000373700 TRAV41A0A0B4J266 112 aa6.18□□□□□ -1.42
HERC4-202ENST00000373700 B4DSR2 109 aa6.18□□□□□ -1.42
HERC4-202ENST00000373700 H3BVH4 76 aa6.18□□□□□ -1.42
HERC4-202ENST00000373700 YPEL3P61236 119 aaPredicted RBP6.18□□□□□ -1.42
HERC4-202ENST00000373700 MAJINQ3KP22 176 aa6.18□□□□□ -1.42
HERC4-202ENST00000373700 LBHQ53QV2 105 aaPredicted RBP6.18□□□□□ -1.42
HERC4-202ENST00000373700 LINC00311Q8N616 119 aa6.18□□□□□ -1.42
HERC4-202ENST00000373700 TNRC6BQ9UPQ9 1833 aaKnown RBP6.18□□□□□ -1.42
HERC4-202ENST00000373700 TRAV9-2A0A087WT02 112 aa6.17□□□□□ -1.42
HERC4-202ENST00000373700 SH2D1AO60880 128 aa6.17□□□□□ -1.42
HERC4-202ENST00000373700 RPS20P60866 119 aaKnown RBP6.17□□□□□ -1.42
HERC4-202ENST00000373700 PAX8Q06710 450 aa6.17□□□□□ -1.42
HERC4-202ENST00000373700 SRSF9Q13242 221 aaKnown RBP eCLIP6.17□□□□□ -1.422e-8■■■□□ 15.1
HERC4-202ENST00000373700 TMEM95Q3KNT9 176 aa6.17□□□□□ -1.42
HERC4-202ENST00000373700 M0R1W7 72 aa6.17□□□□□ -1.42
HERC4-202ENST00000373700 SPRY2O43597 315 aa6.17□□□□□ -1.42
HERC4-202ENST00000373700 MSMBP08118 114 aa6.17□□□□□ -1.42
HERC4-202ENST00000373700 PSG3Q16557 428 aa6.17□□□□□ -1.42
HERC4-202ENST00000373700 FOXC2Q99958 501 aa6.17□□□□□ -1.42
HERC4-202ENST00000373700 PYGO2Q9BRQ0 406 aa6.17□□□□□ -1.42
HERC4-202ENST00000373700 SOX21Q9Y651 276 aaPredicted RBP6.17□□□□□ -1.42
HERC4-202ENST00000373700 TRBV19A0A075B6N1 114 aa6.17□□□□□ -1.42
HERC4-202ENST00000373700 IGHV2-70DA0A0C4DH43 119 aa6.17□□□□□ -1.42
HERC4-202ENST00000373700 IGKV1-17P01599 117 aa6.17□□□□□ -1.42
HERC4-202ENST00000373700 IGHV4-38-2P0DP08 117 aa6.17□□□□□ -1.42
HERC4-202ENST00000373700 ID1P41134 155 aa6.17□□□□□ -1.42
HERC4-202ENST00000373700 LEPP41159 167 aa6.17□□□□□ -1.42
HERC4-202ENST00000373700 RAB9AP51151 201 aa6.17□□□□□ -1.42
HERC4-202ENST00000373700 EBLN2Q6P2I7 272 aa6.17□□□□□ -1.42
HERC4-202ENST00000373700 FAM159AQ6UWV7 190 aa6.17□□□□□ -1.42
HERC4-202ENST00000373700 DYNLRB2Q8TF09 96 aa6.17□□□□□ -1.42
HERC4-202ENST00000373700 FAM167A-AS1Q96KT0 104 aa6.17□□□□□ -1.42
HERC4-202ENST00000373700 SNHG12Q9BXW3 62 aa6.17□□□□□ -1.42
HERC4-202ENST00000373700 IFI27P40305 119 aaPredicted RBP6.16□□□□□ -1.42
HERC4-202ENST00000373700 EIF4EBP1Q13541 118 aaPredicted RBP6.16□□□□□ -1.42
HERC4-202ENST00000373700 Q96MF0 132 aa6.16□□□□□ -1.42
HERC4-202ENST00000373700 JKAMPQ9P055 326 aa6.16□□□□□ -1.42
HERC4-202ENST00000373700 A0A1W2PPR1 153 aa6.16□□□□□ -1.42
HERC4-202ENST00000373700 Q5PR19 223 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms