RNA–Protein interactions for RNA: ENST00000373514.2

CDX4-201, Transcript of caudal type homeobox 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDX4, Length 1,515 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX4-201ENST00000373514 SRD5A3Q9H8P0 318 aa13.77□□□□□ -0.21
CDX4-201ENST00000373514 RNF24Q9Y225 148 aa13.77□□□□□ -0.21
CDX4-201ENST00000373514 TRAV2A0A0B4J234 112 aa13.76□□□□□ -0.21
CDX4-201ENST00000373514 F8W036 122 aa13.76□□□□□ -0.21
CDX4-201ENST00000373514 MRPS12O15235 138 aaKnown RBP13.76□□□□□ -0.21
CDX4-201ENST00000373514 NBEAP1P0C6P0 100 aa13.76□□□□□ -0.21
CDX4-201ENST00000373514 FRMD6-AS1P0C7T7 363 aa13.76□□□□□ -0.21
CDX4-201ENST00000373514 ZNF688P0C7X2 276 aa13.76□□□□□ -0.21
CDX4-201ENST00000373514 CYB561D1Q8N8Q1 229 aa13.76□□□□□ -0.21
CDX4-201ENST00000373514 BLNKQ8WV28 456 aa13.76□□□□□ -0.21
CDX4-201ENST00000373514 HIST1H1EP10412 219 aaKnown RBP13.75□□□□□ -0.21
CDX4-201ENST00000373514 GALR1P47211 349 aa13.75□□□□□ -0.21
CDX4-201ENST00000373514 CEBPGP53567 150 aa13.75□□□□□ -0.21
CDX4-201ENST00000373514 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.75□□□□□ -0.21
CDX4-201ENST00000373514 TXNDC17Q9BRA2 123 aa13.75□□□□□ -0.21
CDX4-201ENST00000373514 AGRNO00468 2067 aa13.75□□□□□ -0.21
CDX4-201ENST00000373514 A0A1W2PRE2 83 aa13.74□□□□□ -0.21
CDX4-201ENST00000373514 H3BQ15 152 aa13.74□□□□□ -0.21
CDX4-201ENST00000373514 H3BTX0 84 aa13.74□□□□□ -0.21
CDX4-201ENST00000373514 SOCS3O14543 225 aa13.74□□□□□ -0.21
CDX4-201ENST00000373514 NDUFS6O75380 124 aaKnown RBP13.74□□□□□ -0.21
CDX4-201ENST00000373514 IGLC2P0DOY2 106 aa13.74□□□□□ -0.21
CDX4-201ENST00000373514 RPL7P18124 248 aaKnown RBP13.74□□□□□ -0.21
CDX4-201ENST00000373514 DEFB131AP59861 70 aa13.74□□□□□ -0.21
CDX4-201ENST00000373514 SEC11CQ9BY50 192 aa13.74□□□□□ -0.21
CDX4-201ENST00000373514 ZNF586Q9NXT0 402 aa13.74□□□□□ -0.21
CDX4-201ENST00000373514 SOHLH1Q5JUK2 328 aa13.74□□□□□ -0.21
CDX4-201ENST00000373514 C10orf91Q5T1B1 145 aa13.74□□□□□ -0.21
CDX4-201ENST00000373514 GPR82Q96P67 336 aa13.74□□□□□ -0.21
CDX4-201ENST00000373514 RBMY1BA6NDE4 496 aaKnown RBP13.73□□□□□ -0.21
CDX4-201ENST00000373514 RBMY1EA6NEQ0 496 aaKnown RBP13.73□□□□□ -0.21
CDX4-201ENST00000373514 GGTLC3B5MD39 225 aa13.73□□□□□ -0.21
CDX4-201ENST00000373514 TMEM250H0YL14 139 aa13.73□□□□□ -0.21
CDX4-201ENST00000373514 PDE6DO43924 150 aa13.73□□□□□ -0.21
CDX4-201ENST00000373514 RBMY1DP0C7P1 496 aaKnown RBP13.73□□□□□ -0.21
CDX4-201ENST00000373514 ATF4P18848 351 aaPredicted RBP13.73□□□□□ -0.21
CDX4-201ENST00000373514 PSMG4Q5JS54 123 aa13.73□□□□□ -0.21
CDX4-201ENST00000373514 IGFL4Q6B9Z1 124 aa13.73□□□□□ -0.21
CDX4-201ENST00000373514 TUBA4BQ9H853 241 aa13.73□□□□□ -0.21
CDX4-201ENST00000373514 F6UZH7 168 aa13.72□□□□□ -0.21
CDX4-201ENST00000373514 DEFB1P60022 68 aa13.72□□□□□ -0.21
CDX4-201ENST00000373514 RANP62826 216 aaKnown RBP13.72□□□□□ -0.21
CDX4-201ENST00000373514 CCDC28AQ8IWP9 274 aa13.72□□□□□ -0.21
CDX4-201ENST00000373514 ASCL2Q99929 193 aa13.72□□□□□ -0.21
CDX4-201ENST00000373514 NKX6-2Q9C056 277 aaPredicted RBP13.72□□□□□ -0.21
CDX4-201ENST00000373514 CARHSP1Q9Y2V2 147 aaKnown RBP13.72□□□□□ -0.21
CDX4-201ENST00000373514 TRBV19A0A075B6N1 114 aa13.71□□□□□ -0.21
CDX4-201ENST00000373514 A8MZ25 164 aa13.71□□□□□ -0.21
CDX4-201ENST00000373514 APOC3P02656 99 aa13.71□□□□□ -0.21
CDX4-201ENST00000373514 SUMO1P63165 101 aaKnown RBP13.71□□□□□ -0.21
CDX4-201ENST00000373514 C20orf173Q96LM9 149 aa13.71□□□□□ -0.21
CDX4-201ENST00000373514 FAM110AQ9BQ89 295 aa13.71□□□□□ -0.21
CDX4-201ENST00000373514 A0A087X0K7 114 aa13.7□□□□□ -0.22
CDX4-201ENST00000373514 SCO2A0A1W2PP80 73 aa13.7□□□□□ -0.22
CDX4-201ENST00000373514 SLC17A3O00476 420 aa13.7□□□□□ -0.22
CDX4-201ENST00000373514 NDUFB4O95168 129 aa13.7□□□□□ -0.22
CDX4-201ENST00000373514 PRB4P10163 310 aaPredicted RBP13.7□□□□□ -0.22
CDX4-201ENST00000373514 B9D2Q9BPU9 175 aa13.7□□□□□ -0.22
CDX4-201ENST00000373514 TRAV8-2A0A0B4J237 113 aa13.69□□□□□ -0.22
CDX4-201ENST00000373514 KNCNA6PVL3 124 aa13.69□□□□□ -0.22
CDX4-201ENST00000373514 RNF182Q8N6D2 247 aa13.69□□□□□ -0.22
CDX4-201ENST00000373514 RPUSD4Q96CM3 377 aaKnown RBP13.69□□□□□ -0.22
CDX4-201ENST00000373514 Q9H3A6 140 aa13.69□□□□□ -0.22
CDX4-201ENST00000373514 PGPA6NDG6 321 aa13.69□□□□□ -0.22
CDX4-201ENST00000373514 HLA-DMBP28068 263 aa13.69□□□□□ -0.22
CDX4-201ENST00000373514 MEOX2P50222 304 aa13.69□□□□□ -0.22
CDX4-201ENST00000373514 SNRPD3P62318 126 aaKnown RBP13.69□□□□□ -0.22
CDX4-201ENST00000373514 PDE6HQ13956 83 aa13.69□□□□□ -0.22
CDX4-201ENST00000373514 LINC00322Q6ZN03 302 aaPredicted RBP13.69□□□□□ -0.22
CDX4-201ENST00000373514 SBSPONQ8IVN8 264 aa13.69□□□□□ -0.22
CDX4-201ENST00000373514 C11orf52Q96A22 123 aa13.69□□□□□ -0.22
CDX4-201ENST00000373514 C16orf92Q96LL3 132 aa13.69□□□□□ -0.22
CDX4-201ENST00000373514 PARLQ9H300 379 aa13.69□□□□□ -0.22
CDX4-201ENST00000373514 RPL35AP18077 110 aaKnown RBP13.68□□□□□ -0.22
CDX4-201ENST00000373514 ZNF674Q2M3X9 581 aa13.68□□□□□ -0.22
CDX4-201ENST00000373514 OTORQ9NRC9 128 aa13.68□□□□□ -0.22
CDX4-201ENST00000373514 ISLRO14498 428 aa13.67□□□□□ -0.22
CDX4-201ENST00000373514 SLC25A5P05141 298 aaKnown RBP13.67□□□□□ -0.22
CDX4-201ENST00000373514 ID1P41134 155 aa13.67□□□□□ -0.22
CDX4-201ENST00000373514 GDF5OSQ5U4N7 250 aa13.67□□□□□ -0.22
CDX4-201ENST00000373514 LYPD1Q8N2G4 141 aa13.67□□□□□ -0.22
CDX4-201ENST00000373514 EXOC3-AS1Q8N2X6 119 aa13.67□□□□□ -0.22
CDX4-201ENST00000373514 ZNF727A8MUV8 499 aa13.66□□□□□ -0.22
CDX4-201ENST00000373514 F6UB75 175 aa13.66□□□□□ -0.22
CDX4-201ENST00000373514 CMC4P56277 68 aaPredicted RBP13.66□□□□□ -0.22
CDX4-201ENST00000373514 ACTL10Q5JWF8 245 aa13.66□□□□□ -0.22
CDX4-201ENST00000373514 SVBPQ8N300 66 aa13.66□□□□□ -0.22
CDX4-201ENST00000373514 SMIM7Q9BQ49 75 aa13.66□□□□□ -0.22
CDX4-201ENST00000373514 DERL1Q9BUN8 251 aa13.66□□□□□ -0.22
CDX4-201ENST00000373514 LOC102724200A0A096LPH7 203 aaPredicted RBP13.65□□□□□ -0.22
CDX4-201ENST00000373514 FAM74A3Q4VXF1 159 aa13.65□□□□□ -0.22
CDX4-201ENST00000373514 TCEAL7Q9BRU2 100 aa13.65□□□□□ -0.22
CDX4-201ENST00000373514 NIPSNAP3BQ9BS92 247 aa13.65□□□□□ -0.22
CDX4-201ENST00000373514 COL7A1Q02388 2944 aa13.65□□□□□ -0.22
CDX4-201ENST00000373514 ZNF253O75346 499 aa13.64□□□□□ -0.23
CDX4-201ENST00000373514 GNG5P63218 68 aa13.64□□□□□ -0.23
CDX4-201ENST00000373514 PSG9Q00887 426 aa13.64□□□□□ -0.23
CDX4-201ENST00000373514 C5orf17Q8NAS9 161 aa13.64□□□□□ -0.23
CDX4-201ENST00000373514 RETNQ9HD89 108 aa13.64□□□□□ -0.23
CDX4-201ENST00000373514 ZNF331Q9NQX6 463 aaPredicted RBP13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 116.5 ms