RNA–Protein interactions for RNA: ENST00000372899.5

UBR2-201, Transcript of ubiquitin protein ligase E3 component n-recognin 2, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene UBR2, Length 7,857 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR2-201ENST00000372899 TMEM141Q96I45 108 aa11.68□□□□□ -0.54
UBR2-201ENST00000372899 RBM38Q9H0Z9 239 aaKnown RBP11.68□□□□□ -0.54
UBR2-201ENST00000372899 FNDC1Q4ZHG4 1894 aaPredicted RBP11.67□□□□□ -0.54
UBR2-201ENST00000372899 NBL1P41271 181 aa11.67□□□□□ -0.54
UBR2-201ENST00000372899 UBE2AP49459 152 aa11.67□□□□□ -0.54
UBR2-201ENST00000372899 GAFA1Q96PS6 74 aa11.67□□□□□ -0.54
UBR2-201ENST00000372899 NDUFB1O75438 58 aa11.67□□□□□ -0.54
UBR2-201ENST00000372899 IGKV1-39P01597 117 aa11.67□□□□□ -0.54
UBR2-201ENST00000372899 IGKV1D-39P04432 117 aa11.67□□□□□ -0.54
UBR2-201ENST00000372899 C5orf47Q569G3 176 aa11.67□□□□□ -0.54
UBR2-201ENST00000372899 ZNF362Q5T0B9 420 aaPredicted RBP11.67□□□□□ -0.54
UBR2-201ENST00000372899 ACACAQ13085 2346 aa11.67□□□□□ -0.54
UBR2-201ENST00000372899 LYZL4Q96KX0 146 aa11.67□□□□□ -0.54
UBR2-201ENST00000372899 A0A0J9YY99 117 aa11.67□□□□□ -0.54
UBR2-201ENST00000372899 E7EQL1 145 aa11.67□□□□□ -0.54
UBR2-201ENST00000372899 NTN3O00634 580 aaPredicted RBP11.67□□□□□ -0.54
UBR2-201ENST00000372899 NHLRC3Q5JS37 347 aa11.66□□□□□ -0.54
UBR2-201ENST00000372899 SPATA31B1PQ5VZV4 182 aa11.66□□□□□ -0.54
UBR2-201ENST00000372899 REG4Q9BYZ8 158 aa11.66□□□□□ -0.54
UBR2-201ENST00000372899 TRAV13-2A0A0B4J235 113 aa11.66□□□□□ -0.54
UBR2-201ENST00000372899 ATP6V0E1O15342 81 aa11.66□□□□□ -0.54
UBR2-201ENST00000372899 LYPD2Q6UXB3 125 aa11.66□□□□□ -0.54
UBR2-201ENST00000372899 IGHV3-38A0A0C4DH36 116 aa11.66□□□□□ -0.54
UBR2-201ENST00000372899 CDKN1BP46527 198 aa11.66□□□□□ -0.54
UBR2-201ENST00000372899 CCL24O00175 119 aa11.66□□□□□ -0.54
UBR2-201ENST00000372899 PFN1P07737 140 aaKnown RBP11.66□□□□□ -0.54
UBR2-201ENST00000372899 GUSBP1Q15486 140 aa11.66□□□□□ -0.54
UBR2-201ENST00000372899 SMKR1H3BMG3 65 aa11.65□□□□□ -0.54
UBR2-201ENST00000372899 HLA-DRB4P13762 266 aa11.65□□□□□ -0.54
UBR2-201ENST00000372899 CRYGSP22914 178 aa11.65□□□□□ -0.54
UBR2-201ENST00000372899 HLA-DRB4X5D2U9 266 aa11.65□□□□□ -0.54
UBR2-201ENST00000372899 IGHV2-70DA0A0C4DH43 119 aa11.65□□□□□ -0.54
UBR2-201ENST00000372899 TP53TG1Q9Y2A0 90 aa11.65□□□□□ -0.54
UBR2-201ENST00000372899 IGHV1OR15-1A0A075B7D0 117 aa11.65□□□□□ -0.54
UBR2-201ENST00000372899 ARMS2P0C7Q2 107 aa11.65□□□□□ -0.54
UBR2-201ENST00000372899 TGFBR3LH3BV60 316 aa11.65□□□□□ -0.54
UBR2-201ENST00000372899 CD177Q8N6Q3 437 aa11.65□□□□□ -0.54
UBR2-201ENST00000372899 F8W735 103 aaPredicted RBP11.65□□□□□ -0.55
UBR2-201ENST00000372899 IGLV2-23P01705 113 aa11.65□□□□□ -0.55
UBR2-201ENST00000372899 IL17DQ8TAD2 202 aa11.65□□□□□ -0.55
UBR2-201ENST00000372899 TMEM242Q9NWH2 141 aa11.64□□□□□ -0.55
UBR2-201ENST00000372899 C9orf153Q5TBE3 101 aa11.64□□□□□ -0.55
UBR2-201ENST00000372899 TREML4Q6UXN2 200 aa11.64□□□□□ -0.55
UBR2-201ENST00000372899 WDR90Q96KV7 1748 aa11.64□□□□□ -0.55
UBR2-201ENST00000372899 A0A1B0GUS0 222 aa11.64□□□□□ -0.55
UBR2-201ENST00000372899 TRAV12-2A0A075B6T6 113 aa11.64□□□□□ -0.55
UBR2-201ENST00000372899 XCL1P47992 114 aa11.64□□□□□ -0.55
UBR2-201ENST00000372899 BAALCQ8WXS3 180 aa11.64□□□□□ -0.55
UBR2-201ENST00000372899 STPG4Q8N801 248 aa11.64□□□□□ -0.55
UBR2-201ENST00000372899 NUP35Q8NFH5 326 aa11.64□□□□□ -0.55
UBR2-201ENST00000372899 RNASE2P10153 161 aaKnown RBP11.63□□□□□ -0.55
UBR2-201ENST00000372899 MPV17L2Q567V2 206 aa11.63□□□□□ -0.55
UBR2-201ENST00000372899 NRXN2Q9P2S2 1712 aa11.63□□□□□ -0.55
UBR2-201ENST00000372899 IGLV3-32A0A0A0MS00 114 aa11.63□□□□□ -0.55
UBR2-201ENST00000372899 TCF15Q12870 199 aa11.63□□□□□ -0.55
UBR2-201ENST00000372899 RPP25LQ8N5L8 163 aaKnown RBP11.63□□□□□ -0.55
UBR2-201ENST00000372899 NOP10Q9NPE3 64 aaKnown RBP11.63□□□□□ -0.55
UBR2-201ENST00000372899 WISP3O95389 354 aaPredicted RBP11.63□□□□□ -0.55
UBR2-201ENST00000372899 PDE6HQ13956 83 aa11.63□□□□□ -0.55
UBR2-201ENST00000372899 FANCD2OSQ96PS1 177 aa11.63□□□□□ -0.55
UBR2-201ENST00000372899 FUSP35637 526 aaKnown RBP eCLIP11.63□□□□□ -0.55
UBR2-201ENST00000372899 Q6ZQT7 251 aa11.63□□□□□ -0.55
UBR2-201ENST00000372899 CFHR2P36980 270 aa11.62□□□□□ -0.55
UBR2-201ENST00000372899 NDUFB8O95169 186 aa11.62□□□□□ -0.55
UBR2-201ENST00000372899 ZNF124Q15973 351 aa11.62□□□□□ -0.55
UBR2-201ENST00000372899 RHOHQ15669 191 aa11.62□□□□□ -0.55
UBR2-201ENST00000372899 CACNA1EQ15878 2313 aa11.62□□□□□ -0.55
UBR2-201ENST00000372899 THSD7AQ9UPZ6 1657 aa11.62□□□□□ -0.55
UBR2-201ENST00000372899 TRACP01848 142 aa11.62□□□□□ -0.55
UBR2-201ENST00000372899 TM2D2Q9BX73 214 aa11.62□□□□□ -0.55
UBR2-201ENST00000372899 ICOSQ9Y6W8 199 aa11.62□□□□□ -0.55
UBR2-201ENST00000372899 GGNQ86UU5 652 aa11.62□□□□□ -0.55
UBR2-201ENST00000372899 CNOT1A5YKK6 2376 aaKnown RBP11.62□□□□□ -0.55
UBR2-201ENST00000372899 MED12Q93074 2177 aa11.62□□□□□ -0.55
UBR2-201ENST00000372899 IGKV1D-12P01611 117 aa11.61□□□□□ -0.55
UBR2-201ENST00000372899 HERVK_113P63121 156 aa11.61□□□□□ -0.55
UBR2-201ENST00000372899 ATP6V0BQ99437 205 aa11.61□□□□□ -0.55
UBR2-201ENST00000372899 TMEM75Q8N9X5 138 aa11.61□□□□□ -0.55
UBR2-201ENST00000372899 FGFBP3Q8TAT2 258 aa11.61□□□□□ -0.55
UBR2-201ENST00000372899 MRPL36Q9P0J6 103 aaKnown RBP11.61□□□□□ -0.55
UBR2-201ENST00000372899 A0A1B0GTI1 187 aa11.61□□□□□ -0.55
UBR2-201ENST00000372899 C8orf31Q8N9H6 132 aa11.61□□□□□ -0.55
UBR2-201ENST00000372899 CRYGCP07315 174 aa11.61□□□□□ -0.55
UBR2-201ENST00000372899 TMEM14BQ9NUH8 114 aa11.61□□□□□ -0.55
UBR2-201ENST00000372899 IGHV4-4A0A075B6R2 117 aa11.6□□□□□ -0.55
UBR2-201ENST00000372899 GREM1O60565 184 aa11.6□□□□□ -0.55
UBR2-201ENST00000372899 AMN1Q8IY45 258 aa11.6□□□□□ -0.55
UBR2-201ENST00000372899 PCNX1Q96RV3 2341 aa11.6□□□□□ -0.55
UBR2-201ENST00000372899 Q6ZS92 163 aa11.6□□□□□ -0.55
UBR2-201ENST00000372899 NCOR1O75376 2440 aa11.6□□□□□ -0.55
UBR2-201ENST00000372899 A0A1W2PPI3 338 aa11.6□□□□□ -0.55
UBR2-201ENST00000372899 IFITM3Q01628 133 aa11.6□□□□□ -0.55
UBR2-201ENST00000372899 ZNF134P52741 427 aa11.6□□□□□ -0.55
UBR2-201ENST00000372899 C9orf47Q6ZRZ4 202 aa11.6□□□□□ -0.55
UBR2-201ENST00000372899 PAQR4Q8N4S7 273 aaPredicted RBP11.6□□□□□ -0.55
UBR2-201ENST00000372899 CFHR4Q92496 578 aa11.6□□□□□ -0.55
UBR2-201ENST00000372899 NDUFA4O00483 81 aa11.6□□□□□ -0.55
UBR2-201ENST00000372899 PLCE1Q9P212 2302 aa11.59□□□□□ -0.55
UBR2-201ENST00000372899 SH2D6Q7Z4S9 175 aa11.59□□□□□ -0.55
UBR2-201ENST00000372899 PRR30Q53SZ7 412 aaPredicted RBP11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms