RNA–Protein interactions for RNA: ENST00000372748.7

COL9A2-202, Transcript of collagen type IX alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL9A2, Length 2,862 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-202ENST00000372748 C18orf15Q96N68 181 aa11.67□□□□□ -0.54
COL9A2-202ENST00000372748 INSIG2Q9Y5U4 225 aa11.67□□□□□ -0.54
COL9A2-202ENST00000372748 TLN1Q9Y490 2541 aaKnown RBP11.66□□□□□ -0.54
COL9A2-202ENST00000372748 ADAMTSL5Q6ZMM2 481 aa11.66□□□□□ -0.54
COL9A2-202ENST00000372748 TMEM75Q8N9X5 138 aa11.66□□□□□ -0.54
COL9A2-202ENST00000372748 SVIPQ8NHG7 77 aa11.66□□□□□ -0.54
COL9A2-202ENST00000372748 ZNF414Q96IQ9 312 aa11.66□□□□□ -0.54
COL9A2-202ENST00000372748 DKK2Q9UBU2 259 aa11.66□□□□□ -0.54
COL9A2-202ENST00000372748 K7EQM0 130 aa11.66□□□□□ -0.54
COL9A2-202ENST00000372748 CT45A10P0DMU9 189 aa11.66□□□□□ -0.54
COL9A2-202ENST00000372748 SCNM1Q9BWG6 230 aa11.66□□□□□ -0.54
COL9A2-202ENST00000372748 TTTY13Q9BZ97 58 aa11.66□□□□□ -0.54
COL9A2-202ENST00000372748 G3V4G9 280 aa11.65□□□□□ -0.54
COL9A2-202ENST00000372748 I3L2K1 104 aa11.65□□□□□ -0.54
COL9A2-202ENST00000372748 PAX2Q02962 417 aa11.65□□□□□ -0.54
COL9A2-202ENST00000372748 HSD52Q0P140 79 aa11.65□□□□□ -0.54
COL9A2-202ENST00000372748 LGALS9BQ3B8N2 356 aa11.65□□□□□ -0.54
COL9A2-202ENST00000372748 LGALS9CQ6DKI2 356 aa11.65□□□□□ -0.54
COL9A2-202ENST00000372748 ORMDL3Q8N138 153 aa11.65□□□□□ -0.54
COL9A2-202ENST00000372748 SPCS1Q9Y6A9 102 aa11.65□□□□□ -0.54
COL9A2-202ENST00000372748 LRBAP50851 2863 aa11.65□□□□□ -0.54
COL9A2-202ENST00000372748 E7EQL1 145 aa11.65□□□□□ -0.54
COL9A2-202ENST00000372748 TNFRSF13BO14836 293 aaPredicted RBP11.65□□□□□ -0.54
COL9A2-202ENST00000372748 FCGR2BP31994 310 aaPredicted RBP11.65□□□□□ -0.54
COL9A2-202ENST00000372748 DLX6P56179 175 aa11.65□□□□□ -0.54
COL9A2-202ENST00000372748 PLGLAQ15195 96 aa11.65□□□□□ -0.54
COL9A2-202ENST00000372748 FAM104BQ5XKR9 115 aa11.65□□□□□ -0.54
COL9A2-202ENST00000372748 HBDP02042 147 aa11.65□□□□□ -0.55
COL9A2-202ENST00000372748 IL4P05112 153 aa11.65□□□□□ -0.55
COL9A2-202ENST00000372748 MRPL51Q4U2R6 128 aaKnown RBP11.65□□□□□ -0.55
COL9A2-202ENST00000372748 Q8NA96 180 aa11.65□□□□□ -0.55
COL9A2-202ENST00000372748 IFI27L1Q96BM0 104 aa11.65□□□□□ -0.55
COL9A2-202ENST00000372748 SHANK2-AS3Q9BTD1 123 aa11.65□□□□□ -0.55
COL9A2-202ENST00000372748 PTPRQQ9UMZ3 2332 aa11.64□□□□□ -0.55
COL9A2-202ENST00000372748 ABCA4P78363 2273 aa11.64□□□□□ -0.55
COL9A2-202ENST00000372748 TMEM189A5PLL7 270 aa11.64□□□□□ -0.55
COL9A2-202ENST00000372748 NPYP01303 97 aa11.64□□□□□ -0.55
COL9A2-202ENST00000372748 CRYGBP07316 175 aa11.64□□□□□ -0.55
COL9A2-202ENST00000372748 TMEM155Q4W5P6 130 aa11.64□□□□□ -0.55
COL9A2-202ENST00000372748 KLF17Q5JT82 389 aaPredicted RBP11.64□□□□□ -0.55
COL9A2-202ENST00000372748 OR1N2Q8NGR9 330 aa11.64□□□□□ -0.55
COL9A2-202ENST00000372748 A0A1B0GW15 77 aa11.64□□□□□ -0.55
COL9A2-202ENST00000372748 RBPJQ06330 500 aa11.64□□□□□ -0.55
COL9A2-202ENST00000372748 ZNF493Q6ZR52 646 aa11.64□□□□□ -0.55
COL9A2-202ENST00000372748 GATD1Q8NB37 220 aa11.64□□□□□ -0.55
COL9A2-202ENST00000372748 IGFBPL1Q8WX77 278 aa11.64□□□□□ -0.55
COL9A2-202ENST00000372748 JKAMPQ9P055 326 aa11.64□□□□□ -0.55
COL9A2-202ENST00000372748 A0A1W2PPM0 123 aa11.63□□□□□ -0.55
COL9A2-202ENST00000372748 COX7A1P24310 79 aa11.63□□□□□ -0.55
COL9A2-202ENST00000372748 CKS2P33552 79 aa11.63□□□□□ -0.55
COL9A2-202ENST00000372748 DPF1Q92782 380 aa11.63□□□□□ -0.55
COL9A2-202ENST00000372748 IGHV1-3A0A0C4DH29 117 aa11.63□□□□□ -0.55
COL9A2-202ENST00000372748 SHISA9B4DS77 424 aa11.63□□□□□ -0.55
COL9A2-202ENST00000372748 CNIH1O95406 144 aa11.63□□□□□ -0.55
COL9A2-202ENST00000372748 CLEC2AQ6UVW9 174 aa11.63□□□□□ -0.55
COL9A2-202ENST00000372748 OR9G4Q8NGQ1 327 aa11.63□□□□□ -0.55
COL9A2-202ENST00000372748 K7EMI3 77 aa11.62□□□□□ -0.55
COL9A2-202ENST00000372748 SH2D1AO60880 128 aa11.62□□□□□ -0.55
COL9A2-202ENST00000372748 NDUFS7O75251 213 aa11.62□□□□□ -0.55
COL9A2-202ENST00000372748 GCSHP23434 173 aa11.62□□□□□ -0.55
COL9A2-202ENST00000372748 TWIST1Q15672 202 aa11.62□□□□□ -0.55
COL9A2-202ENST00000372748 Q6AWC8 147 aa11.62□□□□□ -0.55
COL9A2-202ENST00000372748 C8orf31Q8N9H6 132 aa11.62□□□□□ -0.55
COL9A2-202ENST00000372748 RNF125Q96EQ8 232 aa11.62□□□□□ -0.55
COL9A2-202ENST00000372748 IGKV2-40A0A087WW87 121 aaPredicted RBP11.62□□□□□ -0.55
COL9A2-202ENST00000372748 TRBV6-1A0A0K0K1D8 114 aa11.62□□□□□ -0.55
COL9A2-202ENST00000372748 H3BRN7 92 aa11.62□□□□□ -0.55
COL9A2-202ENST00000372748 GAS8-AS1O95177 125 aa11.62□□□□□ -0.55
COL9A2-202ENST00000372748 IGKV2D-40P01614 121 aaPredicted RBP11.62□□□□□ -0.55
COL9A2-202ENST00000372748 ZNF491Q8N8L2 437 aa11.62□□□□□ -0.55
COL9A2-202ENST00000372748 IGKV2D-26A0A0A0MRZ7 120 aa11.61□□□□□ -0.55
COL9A2-202ENST00000372748 VSTM5A8MXK1 200 aa11.61□□□□□ -0.55
COL9A2-202ENST00000372748 K7ERJ3 54 aa11.61□□□□□ -0.55
COL9A2-202ENST00000372748 RPL24P83731 157 aaKnown RBP11.61□□□□□ -0.55
COL9A2-202ENST00000372748 NEGR1Q7Z3B1 354 aa11.61□□□□□ -0.55
COL9A2-202ENST00000372748 Q8TAT8 98 aa11.61□□□□□ -0.55
COL9A2-202ENST00000372748 U3KQK5 164 aa11.61□□□□□ -0.55
COL9A2-202ENST00000372748 FBLL1A6NHQ2 334 aaKnown RBP11.61□□□□□ -0.55
COL9A2-202ENST00000372748 K7EIM0 57 aa11.61□□□□□ -0.55
COL9A2-202ENST00000372748 GOSR1O95249 250 aa11.61□□□□□ -0.55
COL9A2-202ENST00000372748 IGFL4Q6B9Z1 124 aa11.61□□□□□ -0.55
COL9A2-202ENST00000372748 OR4X2Q8NGF9 303 aa11.61□□□□□ -0.55
COL9A2-202ENST00000372748 NPFFR1Q9GZQ6 430 aa11.61□□□□□ -0.55
COL9A2-202ENST00000372748 MSRB1Q9NZV6 116 aa11.61□□□□□ -0.55
COL9A2-202ENST00000372748 ARHGAP32A7KAX9 2087 aa11.61□□□□□ -0.55
COL9A2-202ENST00000372748 DCHS2Q6V1P9 2916 aa11.61□□□□□ -0.55
COL9A2-202ENST00000372748 PAX8Q06710 450 aa11.61□□□□□ -0.55
COL9A2-202ENST00000372748 FXYD2P54710 66 aa11.6□□□□□ -0.55
COL9A2-202ENST00000372748 NPIPB5A8MRT5 1133 aa11.6□□□□□ -0.55
COL9A2-202ENST00000372748 EGR2P11161 476 aaPredicted RBP11.6□□□□□ -0.55
COL9A2-202ENST00000372748 FABP2P12104 132 aa11.6□□□□□ -0.55
COL9A2-202ENST00000372748 SAMD5Q5TGI4 173 aa11.6□□□□□ -0.55
COL9A2-202ENST00000372748 AAMDCQ9H7C9 122 aa11.6□□□□□ -0.55
COL9A2-202ENST00000372748 WNK2Q9Y3S1 2297 aa11.59□□□□□ -0.55
COL9A2-202ENST00000372748 MRPS12O15235 138 aaKnown RBP11.59□□□□□ -0.55
COL9A2-202ENST00000372748 LINC01560Q8TB33 94 aa11.59□□□□□ -0.55
COL9A2-202ENST00000372748 KAAG1Q9UBP8 84 aa11.59□□□□□ -0.55
COL9A2-202ENST00000372748 BUB1B-PAK6H3BSN5 160 aa11.59□□□□□ -0.55
COL9A2-202ENST00000372748 IGLV1-47P01700 117 aa11.59□□□□□ -0.55
COL9A2-202ENST00000372748 WI2-2373I1.2A0A1W2PRP0 233 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 146.2 ms