RNA–Protein interactions for RNA: ENST00000372447.7

C9orf78-201, Transcript of chromosome 9 open reading frame 78, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf78, Length 1,795 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf78-201ENST00000372447 CLEC3BP05452 202 aa12.33□□□□□ -0.44
C9orf78-201ENST00000372447 CD28P10747 220 aa12.33□□□□□ -0.44
C9orf78-201ENST00000372447 SIGLEC15Q6ZMC9 328 aa12.33□□□□□ -0.44
C9orf78-201ENST00000372447 LCNL1Q6ZST4 164 aa12.33□□□□□ -0.44
C9orf78-201ENST00000372447 EEF1AKMT3Q96AZ1 226 aa12.33□□□□□ -0.44
C9orf78-201ENST00000372447 MS4A10Q96PG2 267 aa12.33□□□□□ -0.44
C9orf78-201ENST00000372447 MLST8Q9BVC4 326 aa12.33□□□□□ -0.44
C9orf78-201ENST00000372447 SMIM27A0A1W2PRY6 76 aa12.32□□□□□ -0.44
C9orf78-201ENST00000372447 XKRY2A2RUG3 117 aa12.32□□□□□ -0.44
C9orf78-201ENST00000372447 BMPR1BO00238 502 aa12.32□□□□□ -0.44
C9orf78-201ENST00000372447 GATCO43716 136 aaKnown RBP12.32□□□□□ -0.44
C9orf78-201ENST00000372447 SMIM6P0DI80 62 aa12.32□□□□□ -0.44
C9orf78-201ENST00000372447 PSMB8P28062 276 aa12.32□□□□□ -0.44
C9orf78-201ENST00000372447 PDE6HQ13956 83 aa12.32□□□□□ -0.44
C9orf78-201ENST00000372447 PRR27Q6MZM9 219 aa12.32□□□□□ -0.44
C9orf78-201ENST00000372447 NUDT10Q8NFP7 164 aa12.32□□□□□ -0.44
C9orf78-201ENST00000372447 NUDT11Q96G61 164 aa12.32□□□□□ -0.44
C9orf78-201ENST00000372447 CCDC140Q96MF4 163 aa12.32□□□□□ -0.44
C9orf78-201ENST00000372447 KLK15Q9H2R5 256 aa12.32□□□□□ -0.44
C9orf78-201ENST00000372447 TRBV7-1A0A0A6YYK4 115 aa12.31□□□□□ -0.44
C9orf78-201ENST00000372447 S100A7P31151 101 aa12.31□□□□□ -0.44
C9orf78-201ENST00000372447 RPL19P84098 196 aaKnown RBP12.31□□□□□ -0.44
C9orf78-201ENST00000372447 GOLT1AQ6ZVE7 132 aa12.31□□□□□ -0.44
C9orf78-201ENST00000372447 C3orf56Q8N813 242 aa12.31□□□□□ -0.44
C9orf78-201ENST00000372447 OR4X2Q8NGF9 303 aa12.31□□□□□ -0.44
C9orf78-201ENST00000372447 CITED1Q99966 193 aa12.31□□□□□ -0.44
C9orf78-201ENST00000372447 ZNF747Q9BV97 191 aa12.31□□□□□ -0.44
C9orf78-201ENST00000372447 GPR61Q9BZJ8 451 aa12.31□□□□□ -0.44
C9orf78-201ENST00000372447 ELANEP08246 267 aa12.3□□□□□ -0.44
C9orf78-201ENST00000372447 PF4V1P10720 104 aa12.3□□□□□ -0.44
C9orf78-201ENST00000372447 RPL7P18124 248 aaKnown RBP12.3□□□□□ -0.44
C9orf78-201ENST00000372447 S100A2P29034 98 aa12.3□□□□□ -0.44
C9orf78-201ENST00000372447 TCL1AP56279 114 aa12.3□□□□□ -0.44
C9orf78-201ENST00000372447 FOXE3Q13461 319 aa12.3□□□□□ -0.44
C9orf78-201ENST00000372447 PDZD11Q5EBL8 140 aa12.3□□□□□ -0.44
C9orf78-201ENST00000372447 COA6Q5JTJ3 125 aaKnown RBP12.3□□□□□ -0.44
C9orf78-201ENST00000372447 TOMM20LQ6UXN7 152 aa12.3□□□□□ -0.44
C9orf78-201ENST00000372447 CLEC19AQ6UXS0 136 aa12.3□□□□□ -0.44
C9orf78-201ENST00000372447 TMEM183AQ8IXX5 376 aa12.3□□□□□ -0.44
C9orf78-201ENST00000372447 GRAMD2BQ96HH9 432 aa12.3□□□□□ -0.44
C9orf78-201ENST00000372447 IGHV3-35A0A0C4DH35 117 aa12.3□□□□□ -0.44
C9orf78-201ENST00000372447 CA1P00915 261 aaPredicted RBP12.3□□□□□ -0.44
C9orf78-201ENST00000372447 RPLP1P05386 114 aaKnown RBP12.3□□□□□ -0.44
C9orf78-201ENST00000372447 CBLN1P23435 193 aa12.3□□□□□ -0.44
C9orf78-201ENST00000372447 RAB9AP51151 201 aa12.3□□□□□ -0.44
C9orf78-201ENST00000372447 ATP5G2Q06055 141 aa12.3□□□□□ -0.44
C9orf78-201ENST00000372447 Q86TA4 180 aa12.3□□□□□ -0.44
C9orf78-201ENST00000372447 RNF152Q8N8N0 203 aa12.3□□□□□ -0.44
C9orf78-201ENST00000372447 CITED2Q99967 270 aaPredicted RBP12.3□□□□□ -0.44
C9orf78-201ENST00000372447 ZFAND3Q9H8U3 227 aa12.3□□□□□ -0.44
C9orf78-201ENST00000372447 GNB4Q9HAV0 340 aa12.3□□□□□ -0.44
C9orf78-201ENST00000372447 TRAV8-1A0A0A6YYK1 113 aa12.29□□□□□ -0.44
C9orf78-201ENST00000372447 TRBV6-1A0A0K0K1D8 114 aa12.29□□□□□ -0.44
C9orf78-201ENST00000372447 FAM223BA6NKX1 122 aa12.29□□□□□ -0.44
C9orf78-201ENST00000372447 IGLV2-11P01706 119 aa12.29□□□□□ -0.44
C9orf78-201ENST00000372447 FAM223AQ8IWN6 122 aa12.29□□□□□ -0.44
C9orf78-201ENST00000372447 IZUMO1RA6ND01 250 aa12.28□□□□□ -0.44
C9orf78-201ENST00000372447 TMEM75Q8N9X5 138 aa12.28□□□□□ -0.44
C9orf78-201ENST00000372447 ATP6V0BQ99437 205 aa12.28□□□□□ -0.44
C9orf78-201ENST00000372447 GNB1LQ9BYB4 327 aa12.28□□□□□ -0.44
C9orf78-201ENST00000372447 AAMDCQ9H7C9 122 aa12.28□□□□□ -0.44
C9orf78-201ENST00000372447 ZNF492Q9P255 531 aa12.28□□□□□ -0.44
C9orf78-201ENST00000372447 IGHV3OR16-8A0A075B7F1 116 aa12.28□□□□□ -0.44
C9orf78-201ENST00000372447 DIRC3C9JPN6 131 aa12.28□□□□□ -0.44
C9orf78-201ENST00000372447 H3BUA1 57 aa12.28□□□□□ -0.44
C9orf78-201ENST00000372447 K7EQM0 130 aa12.28□□□□□ -0.44
C9orf78-201ENST00000372447 SPINK4O60575 86 aa12.28□□□□□ -0.44
C9orf78-201ENST00000372447 BRI3O95415 125 aa12.28□□□□□ -0.44
C9orf78-201ENST00000372447 FRMD6-AS1P0C7T7 363 aa12.28□□□□□ -0.44
C9orf78-201ENST00000372447 PSG9Q00887 426 aa12.28□□□□□ -0.44
C9orf78-201ENST00000372447 PRNTQ86SH4 94 aa12.28□□□□□ -0.44
C9orf78-201ENST00000372447 MRPL18Q9H0U6 180 aaKnown RBP12.28□□□□□ -0.44
C9orf78-201ENST00000372447 SNURFLB1AK76 121 aa12.27□□□□□ -0.45
C9orf78-201ENST00000372447 TRGV3P03979 118 aa12.27□□□□□ -0.45
C9orf78-201ENST00000372447 COX19Q49B96 90 aa12.27□□□□□ -0.45
C9orf78-201ENST00000372447 WDR73Q6P4I2 378 aa12.27□□□□□ -0.45
C9orf78-201ENST00000372447 LINC00322Q6ZN03 302 aaPredicted RBP12.27□□□□□ -0.45
C9orf78-201ENST00000372447 MYOZ3Q8TDC0 251 aa12.27□□□□□ -0.45
C9orf78-201ENST00000372447 TSKUQ8WUA8 353 aa12.27□□□□□ -0.45
C9orf78-201ENST00000372447 SMAD5-AS1Q9Y6J3 95 aa12.27□□□□□ -0.45
C9orf78-201ENST00000372447 C19orf71A6NCJ1 209 aa12.26□□□□□ -0.45
C9orf78-201ENST00000372447 M0R3E3 92 aa12.26□□□□□ -0.45
C9orf78-201ENST00000372447 FABP4P15090 132 aa12.26□□□□□ -0.45
C9orf78-201ENST00000372447 TPPP2P59282 170 aa12.26□□□□□ -0.45
C9orf78-201ENST00000372447 RELQ04864 619 aaPredicted RBP12.26□□□□□ -0.45
C9orf78-201ENST00000372447 KHDC1LQ5JSQ8 128 aa12.26□□□□□ -0.45
C9orf78-201ENST00000372447 SHISA2Q6UWI4 295 aa12.26□□□□□ -0.45
C9orf78-201ENST00000372447 OR10D4PQ8NGN7 298 aa12.26□□□□□ -0.45
C9orf78-201ENST00000372447 RPP21Q9H633 154 aaKnown RBP12.26□□□□□ -0.45
C9orf78-201ENST00000372447 TSSC4Q9Y5U2 329 aaPredicted RBP12.26□□□□□ -0.45
C9orf78-201ENST00000372447 ADARB2-AS1A8MUL3 147 aa12.25□□□□□ -0.45
C9orf78-201ENST00000372447 P01737 135 aa12.25□□□□□ -0.45
C9orf78-201ENST00000372447 MT-ND6P03923 174 aa12.25□□□□□ -0.45
C9orf78-201ENST00000372447 PSG3Q16557 428 aa12.25□□□□□ -0.45
C9orf78-201ENST00000372447 MRPL54Q6P161 138 aaKnown RBP12.25□□□□□ -0.45
C9orf78-201ENST00000372447 C18orf65Q6ZTR6 163 aa12.25□□□□□ -0.45
C9orf78-201ENST00000372447 DAZAP1Q96EP5 407 aaKnown RBP12.25□□□□□ -0.45
C9orf78-201ENST00000372447 HIST1H2BLQ99880 126 aa12.25□□□□□ -0.45
C9orf78-201ENST00000372447 NAT8BQ9UHF3 227 aa12.25□□□□□ -0.45
C9orf78-201ENST00000372447 ZFP30Q9Y2G7 519 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 118.9 ms