RNA–Protein interactions for RNA: ENST00000372396.3

KDM4A-201, Transcript of lysine demethylase 4A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KDM4A, Length 4,474 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4A-201ENST00000372396 LINC00173Q6ZV60 143 aa8.06□□□□□ -1.12
KDM4A-201ENST00000372396 LINC00305Q7Z4B0 112 aa8.06□□□□□ -1.12
KDM4A-201ENST00000372396 CCDC179H3BU77 68 aa8.05□□□□□ -1.12
KDM4A-201ENST00000372396 IGHV3-48P01763 117 aa8.05□□□□□ -1.12
KDM4A-201ENST00000372396 IGKV1-16P04430 117 aa8.05□□□□□ -1.12
KDM4A-201ENST00000372396 CACNG7P62955 275 aa8.05□□□□□ -1.12
KDM4A-201ENST00000372396 FAM159AQ6UWV7 190 aa8.05□□□□□ -1.12
KDM4A-201ENST00000372396 ZNF318Q5VUA4 2279 aa8.05□□□□□ -1.12
KDM4A-201ENST00000372396 PGPA6NDG6 321 aa8.05□□□□□ -1.12
KDM4A-201ENST00000372396 CR1LQ2VPA4 569 aa8.05□□□□□ -1.12
KDM4A-201ENST00000372396 CHAC1Q9BUX1 264 aa8.05□□□□□ -1.12
KDM4A-201ENST00000372396 P01737 135 aa8.05□□□□□ -1.12
KDM4A-201ENST00000372396 ZNF688P0C7X2 276 aa8.05□□□□□ -1.12
KDM4A-201ENST00000372396 RPL7P18124 248 aaKnown RBP8.05□□□□□ -1.12
KDM4A-201ENST00000372396 PGLYRP4Q96LB8 373 aa8.05□□□□□ -1.12
KDM4A-201ENST00000372396 PPDPFQ9H3Y8 114 aa8.05□□□□□ -1.12
KDM4A-201ENST00000372396 C21orf62Q9NYP8 219 aa8.05□□□□□ -1.12
KDM4A-201ENST00000372396 SIGLEC9Q9Y336 463 aa8.05□□□□□ -1.12
KDM4A-201ENST00000372396 TRBV20OR9-2A0A075B6H5 130 aa8.05□□□□□ -1.12
KDM4A-201ENST00000372396 GLMPQ8WWB7 406 aa8.05□□□□□ -1.12
KDM4A-201ENST00000372396 METTL26Q96S19 204 aa8.05□□□□□ -1.12
KDM4A-201ENST00000372396 PRORYQ9H606 182 aa8.05□□□□□ -1.12
KDM4A-201ENST00000372396 SHANK1Q9Y566 2161 aa8.05□□□□□ -1.12
KDM4A-201ENST00000372396 IGHV3OR16-10A0A075B7F0 116 aa8.04□□□□□ -1.12
KDM4A-201ENST00000372396 TRAV8-1A0A0A6YYK1 113 aa8.04□□□□□ -1.12
KDM4A-201ENST00000372396 C10orf55Q5SWW7 151 aa8.04□□□□□ -1.12
KDM4A-201ENST00000372396 PVRIGQ6DKI7 326 aa8.04□□□□□ -1.12
KDM4A-201ENST00000372396 MIR17HGQ75NE6 70 aa8.04□□□□□ -1.12
KDM4A-201ENST00000372396 ATP5L2Q7Z4Y8 100 aa8.04□□□□□ -1.12
KDM4A-201ENST00000372396 SLC25A33Q9BSK2 321 aa8.04□□□□□ -1.12
KDM4A-201ENST00000372396 XGP55808 180 aa8.04□□□□□ -1.12
KDM4A-201ENST00000372396 C9orf153Q5TBE3 101 aa8.04□□□□□ -1.12
KDM4A-201ENST00000372396 CTSZQ9UBR2 303 aa8.04□□□□□ -1.12
KDM4A-201ENST00000372396 CSDC2Q9Y534 153 aaKnown RBP8.04□□□□□ -1.12
KDM4A-201ENST00000372396 LAMA2P24043 3122 aaKnown RBP8.04□□□□□ -1.12
KDM4A-201ENST00000372396 LOC389332A0A1B0GUA5 103 aa8.04□□□□□ -1.12
KDM4A-201ENST00000372396 J3KT08 172 aa8.04□□□□□ -1.12
KDM4A-201ENST00000372396 OR2J3O76001 311 aa8.04□□□□□ -1.12
KDM4A-201ENST00000372396 RNASE2P10153 161 aaKnown RBP8.04□□□□□ -1.12
KDM4A-201ENST00000372396 MGST2Q99735 147 aa8.04□□□□□ -1.12
KDM4A-201ENST00000372396 BPESC1Q9GZL8 116 aa8.04□□□□□ -1.12
KDM4A-201ENST00000372396 LY6EQ16553 131 aa8.03□□□□□ -1.12
KDM4A-201ENST00000372396 C2orf91Q6ZV80 131 aa8.03□□□□□ -1.12
KDM4A-201ENST00000372396 NUP35Q8NFH5 326 aa8.03□□□□□ -1.12
KDM4A-201ENST00000372396 SMIM9A6NGZ8 99 aa8.03□□□□□ -1.12
KDM4A-201ENST00000372396 IGLL5B9A064 214 aa8.03□□□□□ -1.12
KDM4A-201ENST00000372396 COL8A1P27658 744 aa8.03□□□□□ -1.12
KDM4A-201ENST00000372396 ATP6V0E2Q8NHE4 81 aa8.03□□□□□ -1.12
KDM4A-201ENST00000372396 LSM4Q9Y4Z0 139 aaKnown RBP8.03□□□□□ -1.12
KDM4A-201ENST00000372396 SMIM27A0A1W2PRY6 76 aa8.03□□□□□ -1.12
KDM4A-201ENST00000372396 Q6AWC8 147 aa8.03□□□□□ -1.12
KDM4A-201ENST00000372396 ODF3L1Q8IXM7 274 aa8.03□□□□□ -1.12
KDM4A-201ENST00000372396 OR10J6PQ8NGY7 276 aa8.03□□□□□ -1.12
KDM4A-201ENST00000372396 ZNRD1Q9P1U0 126 aa8.03□□□□□ -1.12
KDM4A-201ENST00000372396 INSL3P51460 131 aa8.03□□□□□ -1.12
KDM4A-201ENST00000372396 ZNF138P52744 262 aa8.03□□□□□ -1.12
KDM4A-201ENST00000372396 MRPL23Q16540 153 aaKnown RBP8.03□□□□□ -1.12
KDM4A-201ENST00000372396 SFTA2Q6UW10 78 aa8.03□□□□□ -1.12
KDM4A-201ENST00000372396 C3orf56Q8N813 242 aa8.03□□□□□ -1.12
KDM4A-201ENST00000372396 ZNF256Q9Y2P7 627 aaPredicted RBP8.03□□□□□ -1.12
KDM4A-201ENST00000372396 SLC25A16P16260 332 aa8.02□□□□□ -1.13
KDM4A-201ENST00000372396 LINC01545Q5VT33 79 aa8.02□□□□□ -1.13
KDM4A-201ENST00000372396 GTSF1Q8WW33 167 aa8.02□□□□□ -1.13
KDM4A-201ENST00000372396 TMEM190Q8WZ59 177 aa8.02□□□□□ -1.13
KDM4A-201ENST00000372396 CRXO43186 299 aaPredicted RBP8.02□□□□□ -1.13
KDM4A-201ENST00000372396 HOXA3O43365 443 aaPredicted RBP8.02□□□□□ -1.13
KDM4A-201ENST00000372396 MYOD1P15172 320 aa8.02□□□□□ -1.13
KDM4A-201ENST00000372396 SRSF9Q13242 221 aaKnown RBP eCLIP8.02□□□□□ -1.13
KDM4A-201ENST00000372396 RIGQ13278 110 aa8.02□□□□□ -1.13
KDM4A-201ENST00000372396 Q6ZPA2 131 aa8.02□□□□□ -1.13
KDM4A-201ENST00000372396 TRGV9Q99603 122 aa8.02□□□□□ -1.13
KDM4A-201ENST00000372396 NDUFA4L2Q9NRX3 87 aa8.02□□□□□ -1.13
KDM4A-201ENST00000372396 B4DSR2 109 aa8.02□□□□□ -1.13
KDM4A-201ENST00000372396 DLX6P56179 175 aa8.02□□□□□ -1.13
KDM4A-201ENST00000372396 CACNA1BQ00975 2339 aa8.02□□□□□ -1.13
KDM4A-201ENST00000372396 NPFFO15130 113 aa8.01□□□□□ -1.13
KDM4A-201ENST00000372396 CD24P25063 80 aa8.01□□□□□ -1.13
KDM4A-201ENST00000372396 BRI3O95415 125 aa8.01□□□□□ -1.13
KDM4A-201ENST00000372396 UBE2E1P51965 193 aa8.01□□□□□ -1.13
KDM4A-201ENST00000372396 FXYD2P54710 66 aa8.01□□□□□ -1.13
KDM4A-201ENST00000372396 PTPRQQ9UMZ3 2332 aa8.01□□□□□ -1.13
KDM4A-201ENST00000372396 TNRC18O15417 2968 aaPredicted RBP8.01□□□□□ -1.13
KDM4A-201ENST00000372396 LAMA3Q16787 3333 aa8.01□□□□□ -1.13
KDM4A-201ENST00000372396 BDP1A6H8Y1 2624 aa8.01□□□□□ -1.13
KDM4A-201ENST00000372396 TRAV40A0A0B4J280 105 aa8.01□□□□□ -1.13
KDM4A-201ENST00000372396 TRGV3P03979 118 aa8.01□□□□□ -1.13
KDM4A-201ENST00000372396 RPL13AP40429 203 aaKnown RBP8.01□□□□□ -1.13
KDM4A-201ENST00000372396 PRNTQ86SH4 94 aa8.01□□□□□ -1.13
KDM4A-201ENST00000372396 WIPF2Q8TF74 440 aaPredicted RBP8.01□□□□□ -1.13
KDM4A-201ENST00000372396 MOB4Q9Y3A3 225 aa8.01□□□□□ -1.13
KDM4A-201ENST00000372396 TRAV8-4A0A0B4J246 113 aa8□□□□□ -1.13
KDM4A-201ENST00000372396 IGLV2-14P01704 120 aa8□□□□□ -1.13
KDM4A-201ENST00000372396 DAZAP2Q15038 168 aaPredicted RBP8□□□□□ -1.13
KDM4A-201ENST00000372396 ITLN2Q8WWU7 325 aaPredicted RBP8□□□□□ -1.13
KDM4A-201ENST00000372396 TRANK1O15050 2925 aa8□□□□□ -1.13
KDM4A-201ENST00000372396 SCGB1D4Q6XE38 83 aa8□□□□□ -1.13
KDM4A-201ENST00000372396 A0A1W2PPI3 338 aa7.99□□□□□ -1.13
KDM4A-201ENST00000372396 PEX7O00628 323 aa7.99□□□□□ -1.13
KDM4A-201ENST00000372396 DTX2Q86UW9 622 aa7.99□□□□□ -1.13
KDM4A-201ENST00000372396 CEND1Q8N111 149 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms