RNA–Protein interactions for RNA: ENST00000371937.8

ATPAF1-202, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 1,827 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-202ENST00000371937 TRBV6-1A0A0K0K1D8 114 aa19.99■□□□□ 0.79
ATPAF1-202ENST00000371937 CD28P10747 220 aa19.99■□□□□ 0.79
ATPAF1-202ENST00000371937 SGK494Q96LW2 274 aa19.99■□□□□ 0.79
ATPAF1-202ENST00000371937 FN1P02751 2386 aaKnown RBP19.99■□□□□ 0.79
ATPAF1-202ENST00000371937 GCGP01275 180 aa19.99■□□□□ 0.79
ATPAF1-202ENST00000371937 LTAP01374 205 aa19.99■□□□□ 0.79
ATPAF1-202ENST00000371937 MGST1P10620 155 aaKnown RBP19.99■□□□□ 0.79
ATPAF1-202ENST00000371937 TSSC4Q9Y5U2 329 aaPredicted RBP19.99■□□□□ 0.79
ATPAF1-202ENST00000371937 RPL11P62913 178 aaKnown RBP19.98■□□□□ 0.79
ATPAF1-202ENST00000371937 PSG3Q16557 428 aa19.98■□□□□ 0.79
ATPAF1-202ENST00000371937 IGFL4Q6B9Z1 124 aa19.98■□□□□ 0.79
ATPAF1-202ENST00000371937 IGLV2-11P01706 119 aa19.97■□□□□ 0.79
ATPAF1-202ENST00000371937 LCN12Q6JVE5 192 aa19.97■□□□□ 0.79
ATPAF1-202ENST00000371937 MRPL53Q96EL3 112 aaKnown RBP19.97■□□□□ 0.79
ATPAF1-202ENST00000371937 C16orf92Q96LL3 132 aa19.97■□□□□ 0.79
ATPAF1-202ENST00000371937 NRN1Q9NPD7 142 aa19.97■□□□□ 0.79
ATPAF1-202ENST00000371937 FBLL1A6NHQ2 334 aaKnown RBP19.97■□□□□ 0.79
ATPAF1-202ENST00000371937 SLURP1P55000 103 aa19.97■□□□□ 0.79
ATPAF1-202ENST00000371937 PROK1P58294 105 aa19.97■□□□□ 0.79
ATPAF1-202ENST00000371937 FLI1Q01543 452 aaPredicted RBP19.97■□□□□ 0.79
ATPAF1-202ENST00000371937 OR5I1Q13606 314 aa19.97■□□□□ 0.79
ATPAF1-202ENST00000371937 C11orf44Q8N8P7 122 aa19.97■□□□□ 0.79
ATPAF1-202ENST00000371937 OR10G8Q8NGN5 311 aa19.97■□□□□ 0.79
ATPAF1-202ENST00000371937 TRAV8-1A0A0A6YYK1 113 aa19.96■□□□□ 0.79
ATPAF1-202ENST00000371937 ERVFC1-1P60608 527 aa19.96■□□□□ 0.79
ATPAF1-202ENST00000371937 Q86TA4 180 aa19.96■□□□□ 0.79
ATPAF1-202ENST00000371937 NHLRC2Q8NBF2 726 aa19.96■□□□□ 0.79
ATPAF1-202ENST00000371937 TRAV8-2A0A0B4J237 113 aa19.95■□□□□ 0.78
ATPAF1-202ENST00000371937 COLCA2A8K830 154 aa19.95■□□□□ 0.78
ATPAF1-202ENST00000371937 HLA-DMBP28068 263 aa19.95■□□□□ 0.78
ATPAF1-202ENST00000371937 TCF24Q7RTU0 167 aa19.95■□□□□ 0.78
ATPAF1-202ENST00000371937 PRNTQ86SH4 94 aa19.95■□□□□ 0.78
ATPAF1-202ENST00000371937 FAM24BQ8N5W8 94 aa19.95■□□□□ 0.78
ATPAF1-202ENST00000371937 CITED2Q99967 270 aaPredicted RBP19.95■□□□□ 0.78
ATPAF1-202ENST00000371937 MLST8Q9BVC4 326 aa19.95■□□□□ 0.78
ATPAF1-202ENST00000371937 BIN3Q9NQY0 253 aa19.95■□□□□ 0.78
ATPAF1-202ENST00000371937 ZFP30Q9Y2G7 519 aa19.95■□□□□ 0.78
ATPAF1-202ENST00000371937 SETXQ7Z333 2677 aaKnown RBP19.95■□□□□ 0.78
ATPAF1-202ENST00000371937 C2orf70A6NJV1 201 aa19.95■□□□□ 0.78
ATPAF1-202ENST00000371937 EDN2P20800 178 aa19.95■□□□□ 0.78
ATPAF1-202ENST00000371937 CBLN1P23435 193 aa19.95■□□□□ 0.78
ATPAF1-202ENST00000371937 PEMTQ9UBM1 199 aa19.95■□□□□ 0.78
ATPAF1-202ENST00000371937 PSG8Q9UQ74 426 aa19.95■□□□□ 0.78
ATPAF1-202ENST00000371937 M0QZ24 198 aa19.94■□□□□ 0.78
ATPAF1-202ENST00000371937 SAMD13Q5VXD3 122 aa19.94■□□□□ 0.78
ATPAF1-202ENST00000371937 RNF182Q8N6D2 247 aa19.94■□□□□ 0.78
ATPAF1-202ENST00000371937 OSTCQ9NRP0 149 aa19.94■□□□□ 0.78
ATPAF1-202ENST00000371937 URGCP-MRPS24S4R325 110 aa19.94■□□□□ 0.78
ATPAF1-202ENST00000371937 F8P00451 2351 aa19.93■□□□□ 0.78
ATPAF1-202ENST00000371937 ZNF705FA8MVS1 300 aaPredicted RBP19.93■□□□□ 0.78
ATPAF1-202ENST00000371937 TMEM183AQ8IXX5 376 aa19.93■□□□□ 0.78
ATPAF1-202ENST00000371937 S100PP25815 95 aa19.92■□□□□ 0.78
ATPAF1-202ENST00000371937 ELOBQ15370 118 aa19.92■□□□□ 0.78
ATPAF1-202ENST00000371937 YPEL4Q96NS1 127 aa19.92■□□□□ 0.78
ATPAF1-202ENST00000371937 MLXQ9UH92 298 aa19.92■□□□□ 0.78
ATPAF1-202ENST00000371937 SOCS3O14543 225 aa19.92■□□□□ 0.78
ATPAF1-202ENST00000371937 DUX3Q96PT4 197 aa19.92■□□□□ 0.78
ATPAF1-202ENST00000371937 IGKV2-40A0A087WW87 121 aaPredicted RBP19.91■□□□□ 0.78
ATPAF1-202ENST00000371937 A0A1B0GUS0 222 aa19.91■□□□□ 0.78
ATPAF1-202ENST00000371937 A0A1W2PRX2 142 aa19.91■□□□□ 0.78
ATPAF1-202ENST00000371937 RBAKDNA6NC62 111 aa19.91■□□□□ 0.78
ATPAF1-202ENST00000371937 IGKV2D-40P01614 121 aaPredicted RBP19.91■□□□□ 0.78
ATPAF1-202ENST00000371937 FOLR2P14207 255 aa19.91■□□□□ 0.78
ATPAF1-202ENST00000371937 IBA57Q5T440 356 aaKnown RBP19.91■□□□□ 0.78
ATPAF1-202ENST00000371937 OR9G4Q8NGQ1 327 aa19.91■□□□□ 0.78
ATPAF1-202ENST00000371937 RAX2Q96IS3 184 aa19.91■□□□□ 0.78
ATPAF1-202ENST00000371937 IMMP2LQ96T52 175 aa19.91■□□□□ 0.78
ATPAF1-202ENST00000371937 SETD2Q9BYW2 2564 aaPredicted RBP19.91■□□□□ 0.78
ATPAF1-202ENST00000371937 HIST2H2BDQ6DRA6 164 aa19.9■□□□□ 0.78
ATPAF1-202ENST00000371937 FAM231DQ6ZW35 169 aa19.9■□□□□ 0.78
ATPAF1-202ENST00000371937 RNASE7Q9H1E1 156 aaKnown RBP19.9■□□□□ 0.78
ATPAF1-202ENST00000371937 FHL3Q13643 280 aa19.9■□□□□ 0.78
ATPAF1-202ENST00000371937 DLX4Q92988 240 aaPredicted RBP19.9■□□□□ 0.78
ATPAF1-202ENST00000371937 CCL24O00175 119 aa19.89■□□□□ 0.77
ATPAF1-202ENST00000371937 KCNIP4Q6PIL6 250 aa19.89■□□□□ 0.77
ATPAF1-202ENST00000371937 IGKV3-7A0A075B6H7 116 aa19.88■□□□□ 0.77
ATPAF1-202ENST00000371937 PFN1P07737 140 aaKnown RBP19.88■□□□□ 0.77
ATPAF1-202ENST00000371937 PRB4P10163 310 aaPredicted RBP19.88■□□□□ 0.77
ATPAF1-202ENST00000371937 SRSF2Q01130 221 aaKnown RBP19.88■□□□□ 0.77
ATPAF1-202ENST00000371937 SAPCD1Q5SSQ6 148 aa19.88■□□□□ 0.77
ATPAF1-202ENST00000371937 PRR27Q6MZM9 219 aa19.88■□□□□ 0.77
ATPAF1-202ENST00000371937 V9GYV3 84 aa19.88■□□□□ 0.77
ATPAF1-202ENST00000371937 PRAC2D3DTV9 90 aa19.87■□□□□ 0.77
ATPAF1-202ENST00000371937 ID1P41134 155 aa19.87■□□□□ 0.77
ATPAF1-202ENST00000371937 VGLL1Q99990 258 aa19.87■□□□□ 0.77
ATPAF1-202ENST00000371937 ZNF492Q9P255 531 aa19.87■□□□□ 0.77
ATPAF1-202ENST00000371937 TMA7Q9Y2S6 64 aaKnown RBP19.87■□□□□ 0.77
ATPAF1-202ENST00000371937 FOXL1Q12952 345 aa19.86■□□□□ 0.77
ATPAF1-202ENST00000371937 ZNF738Q8NE65 137 aa19.86■□□□□ 0.77
ATPAF1-202ENST00000371937 DCANP1Q8TF63 244 aa19.86■□□□□ 0.77
ATPAF1-202ENST00000371937 MS4A6AQ9H2W1 248 aa19.86■□□□□ 0.77
ATPAF1-202ENST00000371937 TRBV24-1A0A075B6N3 115 aa19.85■□□□□ 0.77
ATPAF1-202ENST00000371937 RAB5AP20339 215 aa19.85■□□□□ 0.77
ATPAF1-202ENST00000371937 ADAMTSL5Q6ZMM2 481 aa19.85■□□□□ 0.77
ATPAF1-202ENST00000371937 GBGT1Q8N5D6 347 aa19.85■□□□□ 0.77
ATPAF1-202ENST00000371937 NUDT10Q8NFP7 164 aa19.85■□□□□ 0.77
ATPAF1-202ENST00000371937 NUDT11Q96G61 164 aa19.85■□□□□ 0.77
ATPAF1-202ENST00000371937 C20orf173Q96LM9 149 aa19.85■□□□□ 0.77
ATPAF1-202ENST00000371937 IL36BQ9NZH7 164 aa19.85■□□□□ 0.77
ATPAF1-202ENST00000371937 SELENOKQ9Y6D0 94 aa19.85■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms