RNA–Protein interactions for RNA: ENST00000371319.7

SSBP3-203, Transcript of single stranded DNA binding protein 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SSBP3, Length 1,578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-203ENST00000371319 IGKV2D-40P01614 121 aaPredicted RBP13.35□□□□□ -0.27
SSBP3-203ENST00000371319 TYMSP04818 313 aa13.35□□□□□ -0.27
SSBP3-203ENST00000371319 RNASE1P07998 156 aaKnown RBP13.35□□□□□ -0.27
SSBP3-203ENST00000371319 EDN2P20800 178 aa13.35□□□□□ -0.27
SSBP3-203ENST00000371319 RPEL1Q2QD12 228 aa13.35□□□□□ -0.27
SSBP3-203ENST00000371319 PRR27Q6MZM9 219 aa13.35□□□□□ -0.27
SSBP3-203ENST00000371319 LINC00322Q6ZN03 302 aaPredicted RBP13.35□□□□□ -0.27
SSBP3-203ENST00000371319 C8orf86Q6ZUL3 223 aa13.35□□□□□ -0.27
SSBP3-203ENST00000371319 NUDT10Q8NFP7 164 aa13.35□□□□□ -0.27
SSBP3-203ENST00000371319 NUDT11Q96G61 164 aa13.35□□□□□ -0.27
SSBP3-203ENST00000371319 GRAMD2BQ96HH9 432 aa13.35□□□□□ -0.27
SSBP3-203ENST00000371319 SRD5A3Q9H8P0 318 aa13.35□□□□□ -0.27
SSBP3-203ENST00000371319 ZNF705FA8MVS1 300 aaPredicted RBP13.34□□□□□ -0.27
SSBP3-203ENST00000371319 SRD5A1P18405 259 aa13.34□□□□□ -0.27
SSBP3-203ENST00000371319 TCTEX1D4Q5JR98 221 aa13.34□□□□□ -0.27
SSBP3-203ENST00000371319 LCN12Q6JVE5 192 aa13.34□□□□□ -0.27
SSBP3-203ENST00000371319 C18orf65Q6ZTR6 163 aa13.34□□□□□ -0.27
SSBP3-203ENST00000371319 RNF182Q8N6D2 247 aa13.34□□□□□ -0.27
SSBP3-203ENST00000371319 ASCL2Q99929 193 aa13.34□□□□□ -0.27
SSBP3-203ENST00000371319 SMPXQ9UHP9 88 aa13.34□□□□□ -0.27
SSBP3-203ENST00000371319 C19orf71A6NCJ1 209 aa13.33□□□□□ -0.28
SSBP3-203ENST00000371319 ZNF705GA8MUZ8 300 aaPredicted RBP13.33□□□□□ -0.28
SSBP3-203ENST00000371319 GATCO43716 136 aaKnown RBP13.33□□□□□ -0.28
SSBP3-203ENST00000371319 WIPF2Q8TF74 440 aaPredicted RBP13.33□□□□□ -0.28
SSBP3-203ENST00000371319 RHPN1-AS1Q9BWJ2 59 aa13.33□□□□□ -0.28
SSBP3-203ENST00000371319 BIN3Q9NQY0 253 aa13.33□□□□□ -0.28
SSBP3-203ENST00000371319 ZFP30Q9Y2G7 519 aa13.33□□□□□ -0.28
SSBP3-203ENST00000371319 UFC1Q9Y3C8 167 aa13.33□□□□□ -0.28
SSBP3-203ENST00000371319 TLN2Q9Y4G6 2542 aa13.33□□□□□ -0.28
SSBP3-203ENST00000371319 TRAV9-1A0A075B6T8 112 aa13.32□□□□□ -0.28
SSBP3-203ENST00000371319 PRAC2D3DTV9 90 aa13.32□□□□□ -0.28
SSBP3-203ENST00000371319 PHOX2AO14813 284 aa13.32□□□□□ -0.28
SSBP3-203ENST00000371319 TRGC2P03986 189 aa13.32□□□□□ -0.28
SSBP3-203ENST00000371319 REC114Q7Z4M0 266 aa13.32□□□□□ -0.28
SSBP3-203ENST00000371319 MRPL53Q96EL3 112 aaKnown RBP13.32□□□□□ -0.28
SSBP3-203ENST00000371319 SMIM27A0A1W2PRY6 76 aa13.32□□□□□ -0.28
SSBP3-203ENST00000371319 SOCS3O14543 225 aa13.32□□□□□ -0.28
SSBP3-203ENST00000371319 ZC2HC1AQ96GY0 325 aa13.32□□□□□ -0.28
SSBP3-203ENST00000371319 VGLL1Q99990 258 aa13.32□□□□□ -0.28
SSBP3-203ENST00000371319 SONP18583 2426 aaKnown RBP13.31□□□□□ -0.28
SSBP3-203ENST00000371319 TMEM213A2RRL7 107 aa13.31□□□□□ -0.28
SSBP3-203ENST00000371319 LGALS9O00182 355 aa13.31□□□□□ -0.28
SSBP3-203ENST00000371319 CA1P00915 261 aaPredicted RBP13.31□□□□□ -0.28
SSBP3-203ENST00000371319 CDX1P47902 265 aaPredicted RBP13.31□□□□□ -0.28
SSBP3-203ENST00000371319 HILS1P60008 231 aa13.31□□□□□ -0.28
SSBP3-203ENST00000371319 GBGT1Q8N5D6 347 aa13.31□□□□□ -0.28
SSBP3-203ENST00000371319 ZNF418Q8TF45 676 aaPredicted RBP13.31□□□□□ -0.28
SSBP3-203ENST00000371319 BTF3L4Q96K17 158 aa13.31□□□□□ -0.28
SSBP3-203ENST00000371319 C8orf49Q96NF6 230 aa13.31□□□□□ -0.28
SSBP3-203ENST00000371319 C16orf95Q9H693 158 aa13.31□□□□□ -0.28
SSBP3-203ENST00000371319 ACANP16112 2415 aa13.31□□□□□ -0.28
SSBP3-203ENST00000371319 FBLL1A6NHQ2 334 aaKnown RBP13.3□□□□□ -0.28
SSBP3-203ENST00000371319 A8MWP6 167 aa13.3□□□□□ -0.28
SSBP3-203ENST00000371319 HOXD3P31249 432 aaPredicted RBP13.3□□□□□ -0.28
SSBP3-203ENST00000371319 C16orf92Q96LL3 132 aa13.3□□□□□ -0.28
SSBP3-203ENST00000371319 C20orf173Q96LM9 149 aa13.3□□□□□ -0.28
SSBP3-203ENST00000371319 RBAKDNA6NC62 111 aa13.29□□□□□ -0.28
SSBP3-203ENST00000371319 TCL1AP56279 114 aa13.29□□□□□ -0.28
SSBP3-203ENST00000371319 SYNJ2BPP57105 145 aa13.29□□□□□ -0.28
SSBP3-203ENST00000371319 COX8CQ7Z4L0 72 aa13.29□□□□□ -0.28
SSBP3-203ENST00000371319 C4orf3Q8WVX3 66 aa13.29□□□□□ -0.28
SSBP3-203ENST00000371319 RPP21Q9H633 154 aaKnown RBP13.29□□□□□ -0.28
SSBP3-203ENST00000371319 MYO9AB2RTY4 2548 aa13.29□□□□□ -0.28
SSBP3-203ENST00000371319 NPIPB6E9PJ23 425 aa13.28□□□□□ -0.28
SSBP3-203ENST00000371319 ERCC8Q13216 396 aa13.28□□□□□ -0.28
SSBP3-203ENST00000371319 CLEC5AQ9NY25 188 aa13.28□□□□□ -0.28
SSBP3-203ENST00000371319 P01737 135 aa13.28□□□□□ -0.28
SSBP3-203ENST00000371319 CRIP1P50238 77 aa13.28□□□□□ -0.28
SSBP3-203ENST00000371319 DEFB136Q30KP8 78 aa13.28□□□□□ -0.28
SSBP3-203ENST00000371319 ACTL10Q5JWF8 245 aa13.28□□□□□ -0.28
SSBP3-203ENST00000371319 Q8TAT8 98 aa13.28□□□□□ -0.28
SSBP3-203ENST00000371319 FRZBQ92765 325 aa13.28□□□□□ -0.28
SSBP3-203ENST00000371319 PRR25Q96S07 402 aa13.28□□□□□ -0.28
SSBP3-203ENST00000371319 NRN1Q9NPD7 142 aa13.28□□□□□ -0.28
SSBP3-203ENST00000371319 SELENOKQ9Y6D0 94 aa13.28□□□□□ -0.28
SSBP3-203ENST00000371319 IZUMO1RA6ND01 250 aa13.27□□□□□ -0.29
SSBP3-203ENST00000371319 KLF5Q13887 457 aaPredicted RBP13.27□□□□□ -0.29
SSBP3-203ENST00000371319 CT83Q5H943 113 aa13.27□□□□□ -0.29
SSBP3-203ENST00000371319 SAPCD1Q5SSQ6 148 aa13.27□□□□□ -0.29
SSBP3-203ENST00000371319 TCF24Q7RTU0 167 aa13.27□□□□□ -0.29
SSBP3-203ENST00000371319 TSKUQ8WUA8 353 aa13.27□□□□□ -0.29
SSBP3-203ENST00000371319 DAZAP1Q96EP5 407 aaKnown RBP13.27□□□□□ -0.29
SSBP3-203ENST00000371319 LINC01619G3V211 115 aa13.26□□□□□ -0.29
SSBP3-203ENST00000371319 SLURP1P55000 103 aa13.26□□□□□ -0.29
SSBP3-203ENST00000371319 HIST2H2BDQ6DRA6 164 aa13.26□□□□□ -0.29
SSBP3-203ENST00000371319 OR4B1Q8NGF8 309 aa13.26□□□□□ -0.29
SSBP3-203ENST00000371319 LINC01006Q8NI28 216 aa13.26□□□□□ -0.29
SSBP3-203ENST00000371319 GPR61Q9BZJ8 451 aa13.26□□□□□ -0.29
SSBP3-203ENST00000371319 HIST1H2BKO60814 126 aa13.25□□□□□ -0.29
SSBP3-203ENST00000371319 HIST1H2BJP06899 126 aa13.25□□□□□ -0.29
SSBP3-203ENST00000371319 FRMD6-AS1P0C7T7 363 aa13.25□□□□□ -0.29
SSBP3-203ENST00000371319 TRGC1P0CF51 173 aa13.25□□□□□ -0.29
SSBP3-203ENST00000371319 HIST1H2BOP23527 126 aa13.25□□□□□ -0.29
SSBP3-203ENST00000371319 HIST1H2BBP33778 126 aa13.25□□□□□ -0.29
SSBP3-203ENST00000371319 BMI1P35226 326 aa13.25□□□□□ -0.29
SSBP3-203ENST00000371319 HIST1H2BDP58876 126 aa13.25□□□□□ -0.29
SSBP3-203ENST00000371319 HIST1H2BCP62807 126 aa13.25□□□□□ -0.29
SSBP3-203ENST00000371319 RPL11P62913 178 aaKnown RBP13.25□□□□□ -0.29
SSBP3-203ENST00000371319 HIST2H2BEQ16778 126 aa13.25□□□□□ -0.29
SSBP3-203ENST00000371319 KHDC1LQ5JSQ8 128 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms