RNA–Protein interactions for RNA: ENST00000371219.2

RBM38-204, Transcript of RNA binding motif protein 38, human

TSL 2 BASIC

Gene RBM38, Length 760 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBM38-204	ENST00000371219	ZMAT4	Q9H898	229 aa		10.86	□□□□□ -0.67
RBM38-204	ENST00000371219	TMEM167B	Q9NRX6	74 aa		10.86	□□□□□ -0.67
RBM38-204	ENST00000371219	KNCN	A6PVL3	124 aa		10.85	□□□□□ -0.67
RBM38-204	ENST00000371219	OR10J4	P0C629	311 aa		10.85	□□□□□ -0.67
RBM38-204	ENST00000371219	BLNK	Q8WV28	456 aa		10.85	□□□□□ -0.67
RBM38-204	ENST00000371219	PHYHIPL	Q96FC7	376 aa		10.85	□□□□□ -0.67
RBM38-204	ENST00000371219	HUWE1	Q7Z6Z7	4374 aa	Known RBP	10.84	□□□□□ -0.67
RBM38-204	ENST00000371219	FAM74A1	Q5RGS3	127 aa		10.84	□□□□□ -0.67
RBM38-204	ENST00000371219	OR8A1	Q8NGG7	326 aa		10.84	□□□□□ -0.67
RBM38-204	ENST00000371219	TMED6	Q8WW62	240 aa		10.84	□□□□□ -0.67
RBM38-204	ENST00000371219	RPUSD4	Q96CM3	377 aa	Known RBP	10.84	□□□□□ -0.67
RBM38-204	ENST00000371219	ARL2-SNX15	V9GYD0	113 aa		10.84	□□□□□ -0.67
RBM38-204	ENST00000371219	AMBP	P02760	352 aa		10.83	□□□□□ -0.68
RBM38-204	ENST00000371219	RPL35A	P18077	110 aa	Known RBP	10.83	□□□□□ -0.68
RBM38-204	ENST00000371219	GCHFR	P30047	84 aa		10.83	□□□□□ -0.68
RBM38-204	ENST00000371219	ZNF726P1	Q15940	193 aa		10.83	□□□□□ -0.68
RBM38-204	ENST00000371219	GDF5OS	Q5U4N7	250 aa		10.83	□□□□□ -0.68
RBM38-204	ENST00000371219	OR10J6P	Q8NGY7	276 aa		10.83	□□□□□ -0.68
RBM38-204	ENST00000371219	ODF3	Q96PU9	254 aa		10.83	□□□□□ -0.68
RBM38-204	ENST00000371219	OTOR	Q9NRC9	128 aa		10.83	□□□□□ -0.68
RBM38-204	ENST00000371219	MAP1LC3B2	A6NCE7	125 aa		10.82	□□□□□ -0.68
RBM38-204	ENST00000371219		H3BTX0	84 aa		10.82	□□□□□ -0.68
RBM38-204	ENST00000371219	CA1	P00915	261 aa	Predicted RBP	10.82	□□□□□ -0.68
RBM38-204	ENST00000371219	CNN1	P51911	297 aa	Known RBP	10.82	□□□□□ -0.68
RBM38-204	ENST00000371219	IGFL4	Q6B9Z1	124 aa		10.82	□□□□□ -0.68
RBM38-204	ENST00000371219	RXFP4	Q8TDU9	374 aa		10.82	□□□□□ -0.68
RBM38-204	ENST00000371219	NKX6-2	Q9C056	277 aa	Predicted RBP	10.82	□□□□□ -0.68
RBM38-204	ENST00000371219	MAP1LC3B	Q9GZQ8	125 aa		10.82	□□□□□ -0.68
RBM38-204	ENST00000371219		Q9H3A6	140 aa		10.82	□□□□□ -0.68
RBM38-204	ENST00000371219		A0A1W2PRE2	83 aa		10.81	□□□□□ -0.68
RBM38-204	ENST00000371219	RBAKDN	A6NC62	111 aa		10.81	□□□□□ -0.68
RBM38-204	ENST00000371219	SLC25A5	P05141	298 aa	Known RBP	10.81	□□□□□ -0.68
RBM38-204	ENST00000371219	SNRPC	P09234	159 aa	Known RBP	10.81	□□□□□ -0.68
RBM38-204	ENST00000371219	HLA-DMB	P28068	263 aa		10.81	□□□□□ -0.68
RBM38-204	ENST00000371219	CSN1S1	P47710	185 aa		10.81	□□□□□ -0.68
RBM38-204	ENST00000371219	SULT1A2	P50226	295 aa		10.81	□□□□□ -0.68
RBM38-204	ENST00000371219	ICAM4	Q14773	271 aa		10.81	□□□□□ -0.68
RBM38-204	ENST00000371219	LCE2D	Q5TA82	110 aa	Predicted RBP	10.81	□□□□□ -0.68
RBM38-204	ENST00000371219	SSX7	Q7RTT5	188 aa		10.81	□□□□□ -0.68
RBM38-204	ENST00000371219	MBD3L1	Q8WWY6	194 aa		10.81	□□□□□ -0.68
RBM38-204	ENST00000371219	SERTM2	A0A1B0GWG4	89 aa		10.8	□□□□□ -0.68
RBM38-204	ENST00000371219	NPIPB6	E9PJ23	425 aa		10.8	□□□□□ -0.68
RBM38-204	ENST00000371219		F6UB75	175 aa		10.8	□□□□□ -0.68
RBM38-204	ENST00000371219	HMGB3	O15347	200 aa	Known RBP	10.8	□□□□□ -0.68
RBM38-204	ENST00000371219	RAN	P62826	216 aa	Known RBP	10.8	□□□□□ -0.68
RBM38-204	ENST00000371219	HIST1H1A	Q02539	215 aa	Predicted RBP	10.8	□□□□□ -0.68
RBM38-204	ENST00000371219	AMTN	Q6UX39	209 aa		10.8	□□□□□ -0.68
RBM38-204	ENST00000371219	EXOC3-AS1	Q8N2X6	119 aa		10.8	□□□□□ -0.68
RBM38-204	ENST00000371219	OR4B1	Q8NGF8	309 aa		10.8	□□□□□ -0.68
RBM38-204	ENST00000371219	FAM213B	Q8TBF2	198 aa		10.8	□□□□□ -0.68
RBM38-204	ENST00000371219	RNF183	Q96D59	192 aa		10.8	□□□□□ -0.68
RBM38-204	ENST00000371219	RCHY1	Q96PM5	261 aa		10.8	□□□□□ -0.68
RBM38-204	ENST00000371219	ASCL2	Q99929	193 aa		10.8	□□□□□ -0.68
RBM38-204	ENST00000371219	TCEAL7	Q9BRU2	100 aa		10.8	□□□□□ -0.68
RBM38-204	ENST00000371219	TRAV1-1	A0A0B4J248	108 aa		10.79	□□□□□ -0.68
RBM38-204	ENST00000371219	TRBV7-9	A0A0J9YWB2	115 aa		10.79	□□□□□ -0.68
RBM38-204	ENST00000371219	TEX46	H3BTG2	121 aa		10.79	□□□□□ -0.68
RBM38-204	ENST00000371219	BOLA2-SMG1P6	H3BVE0	249 aa		10.79	□□□□□ -0.68
RBM38-204	ENST00000371219		M0R3E3	92 aa		10.79	□□□□□ -0.68
RBM38-204	ENST00000371219	GIG44	P09565	113 aa	Predicted RBP	10.79	□□□□□ -0.68
RBM38-204	ENST00000371219	PPT1	P50897	306 aa		10.79	□□□□□ -0.68
RBM38-204	ENST00000371219	DEFB135	Q30KP9	77 aa		10.79	□□□□□ -0.68
RBM38-204	ENST00000371219	C9orf47	Q6ZRZ4	202 aa		10.79	□□□□□ -0.68
RBM38-204	ENST00000371219	C5orf17	Q8NAS9	161 aa		10.79	□□□□□ -0.68
RBM38-204	ENST00000371219		U3KQK5	164 aa		10.79	□□□□□ -0.68
RBM38-204	ENST00000371219	ZNF705F	A8MVS1	300 aa	Predicted RBP	10.78	□□□□□ -0.68
RBM38-204	ENST00000371219	SPRY2	O43597	315 aa		10.78	□□□□□ -0.68
RBM38-204	ENST00000371219	TSPO	P30536	169 aa		10.78	□□□□□ -0.68
RBM38-204	ENST00000371219	FHIT	P49789	147 aa		10.78	□□□□□ -0.68
RBM38-204	ENST00000371219	NKX2-5	P52952	324 aa	Predicted RBP	10.78	□□□□□ -0.68
RBM38-204	ENST00000371219	DEFB1	P60022	68 aa		10.78	□□□□□ -0.68
RBM38-204	ENST00000371219	CMTM2	Q8TAZ6	248 aa		10.78	□□□□□ -0.68
RBM38-204	ENST00000371219	LINC00477	Q96M19	166 aa		10.78	□□□□□ -0.68
RBM38-204	ENST00000371219	OVOL2	Q9BRP0	275 aa		10.78	□□□□□ -0.68
RBM38-204	ENST00000371219	PLA2G2E	Q9NZK7	142 aa		10.78	□□□□□ -0.68
RBM38-204	ENST00000371219	FBLL1	A6NHQ2	334 aa	Known RBP	10.77	□□□□□ -0.69
RBM38-204	ENST00000371219	EIF3G	O75821	320 aa	Known RBP eCLIP	10.77	□□□□□ -0.69
RBM38-204	ENST00000371219	HBE1	P02100	147 aa		10.77	□□□□□ -0.69
RBM38-204	ENST00000371219	NMB	P08949	121 aa		10.77	□□□□□ -0.69
RBM38-204	ENST00000371219	H2AFB1	P0C5Y9	115 aa		10.77	□□□□□ -0.69
RBM38-204	ENST00000371219	IQCF2	Q8IXL9	164 aa		10.77	□□□□□ -0.69
RBM38-204	ENST00000371219	CSNK1G2-AS1	Q8NCQ2	148 aa		10.77	□□□□□ -0.69
RBM38-204	ENST00000371219	SFT2D1	Q8WV19	159 aa		10.77	□□□□□ -0.69
RBM38-204	ENST00000371219	C20orf144	Q9BQM9	153 aa		10.77	□□□□□ -0.69
RBM38-204	ENST00000371219	PPP1R14D	Q9NXH3	145 aa		10.77	□□□□□ -0.69
RBM38-204	ENST00000371219	LENEP	Q9Y5L5	61 aa		10.77	□□□□□ -0.69
RBM38-204	ENST00000371219	DIRC3	C9JPN6	131 aa		10.76	□□□□□ -0.69
RBM38-204	ENST00000371219	PRAC2	D3DTV9	90 aa		10.76	□□□□□ -0.69
RBM38-204	ENST00000371219	INS	P01308	110 aa		10.76	□□□□□ -0.69
RBM38-204	ENST00000371219	CDKN1B	P46527	198 aa		10.76	□□□□□ -0.69
RBM38-204	ENST00000371219	TMEM78	Q5T7P6	136 aa		10.76	□□□□□ -0.69
RBM38-204	ENST00000371219	IGF2BP2-AS1	Q96M15	143 aa		10.76	□□□□□ -0.69
RBM38-204	ENST00000371219	PGP	A6NDG6	321 aa		10.75	□□□□□ -0.69
RBM38-204	ENST00000371219	ZNF705E	A8MWA4	302 aa	Predicted RBP	10.75	□□□□□ -0.69
RBM38-204	ENST00000371219	GGTLC3	B5MD39	225 aa		10.75	□□□□□ -0.69
RBM38-204	ENST00000371219		K7EQM0	130 aa		10.75	□□□□□ -0.69
RBM38-204	ENST00000371219	IGKV3-20	P01619	116 aa		10.75	□□□□□ -0.69
RBM38-204	ENST00000371219	LEP	P41159	167 aa		10.75	□□□□□ -0.69
RBM38-204	ENST00000371219	FGF8	P55075	233 aa	Predicted RBP	10.75	□□□□□ -0.69
RBM38-204	ENST00000371219	PMS2P11	Q13670	270 aa		10.75	□□□□□ -0.69

Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms