RNA–Protein interactions for RNA: ENST00000370576.8

MCF2-203, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MCF2, Length 3,688 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-203ENST00000370576 NMUP48645 174 aa2.92□□□□□ -1.94
MCF2-203ENST00000370576 LYZL2Q7Z4W2 148 aa2.92□□□□□ -1.94
MCF2-203ENST00000370576 ZNF575Q86XF7 245 aa2.92□□□□□ -1.94
MCF2-203ENST00000370576 C10orf105Q8TEF2 133 aa2.92□□□□□ -1.94
MCF2-203ENST00000370576 OR4C12Q96R67 309 aa2.92□□□□□ -1.94
MCF2-203ENST00000370576 SEC16AO15027 2179 aa2.92□□□□□ -1.94
MCF2-203ENST00000370576 ABCA2Q9BZC7 2435 aa2.92□□□□□ -1.94
MCF2-203ENST00000370576 IGKV1D-37A0A075B6S9 117 aa2.92□□□□□ -1.94
MCF2-203ENST00000370576 IGHV1-69-2A0A0G2JMI3 117 aa2.92□□□□□ -1.94
MCF2-203ENST00000370576 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP2.92□□□□□ -1.94
MCF2-203ENST00000370576 M0R233 179 aa2.92□□□□□ -1.94
MCF2-203ENST00000370576 GAGE7O76087 117 aa2.92□□□□□ -1.94
MCF2-203ENST00000370576 JTBO76095 146 aa2.92□□□□□ -1.94
MCF2-203ENST00000370576 GAGE12FP0CL80 117 aa2.92□□□□□ -1.94
MCF2-203ENST00000370576 GAGE12GP0CL81 117 aa2.92□□□□□ -1.94
MCF2-203ENST00000370576 GAGE12IP0CL82 117 aa2.92□□□□□ -1.94
MCF2-203ENST00000370576 SERF2P84101 59 aa2.92□□□□□ -1.94
MCF2-203ENST00000370576 MEF2BQ02080 365 aaPredicted RBP2.92□□□□□ -1.94
MCF2-203ENST00000370576 KRTAP1-1Q07627 177 aa2.92□□□□□ -1.94
MCF2-203ENST00000370576 GAGE4Q13068 117 aa2.92□□□□□ -1.94
MCF2-203ENST00000370576 TGIF2LYQ8IUE0 185 aa2.92□□□□□ -1.94
MCF2-203ENST00000370576 FAM24BQ8N5W8 94 aa2.92□□□□□ -1.94
MCF2-203ENST00000370576 OR2T35Q8NGX2 323 aa2.92□□□□□ -1.94
MCF2-203ENST00000370576 ACY3Q96HD9 319 aa2.92□□□□□ -1.94
MCF2-203ENST00000370576 ZNF714Q96N38 554 aa2.92□□□□□ -1.94
MCF2-203ENST00000370576 SPIN2AQ99865 258 aa2.92□□□□□ -1.94
MCF2-203ENST00000370576 SPIN2BQ9BPZ2 258 aa2.92□□□□□ -1.94
MCF2-203ENST00000370576 NCOR2Q9Y618 2525 aa2.92□□□□□ -1.94
MCF2-203ENST00000370576 RELNP78509 3460 aa2.92□□□□□ -1.94
MCF2-203ENST00000370576 PLAC8L1A1L4L8 177 aa2.92□□□□□ -1.94
MCF2-203ENST00000370576 A8MTW9 85 aa2.92□□□□□ -1.94
MCF2-203ENST00000370576 ZNF727A8MUV8 499 aa2.92□□□□□ -1.94
MCF2-203ENST00000370576 KRTAP4-16G5E9R7 235 aaPredicted RBP2.92□□□□□ -1.94
MCF2-203ENST00000370576 IFNA7P01567 189 aa2.92□□□□□ -1.94
MCF2-203ENST00000370576 TRBV12-3P01733 135 aa2.92□□□□□ -1.94
MCF2-203ENST00000370576 SAA2P0DJI9 122 aaPredicted RBP2.92□□□□□ -1.94
MCF2-203ENST00000370576 ADCYAP1P18509 176 aa2.92□□□□□ -1.94
MCF2-203ENST00000370576 ZNF83P51522 516 aa2.92□□□□□ -1.94
MCF2-203ENST00000370576 EFNA4P52798 201 aa2.92□□□□□ -1.94
MCF2-203ENST00000370576 JOSD1Q15040 202 aaPredicted RBP2.92□□□□□ -1.94
MCF2-203ENST00000370576 COL5A1-AS1Q5SY13 56 aa2.92□□□□□ -1.94
MCF2-203ENST00000370576 ZNF826PQ6ZT77 177 aa2.92□□□□□ -1.94
MCF2-203ENST00000370576 FER1L6-AS1Q8NA97 138 aa2.92□□□□□ -1.94
MCF2-203ENST00000370576 TMEM242Q9NWH2 141 aa2.92□□□□□ -1.94
MCF2-203ENST00000370576 LY96Q9Y6Y9 160 aa2.92□□□□□ -1.94
MCF2-203ENST00000370576 DNAH6Q9C0G6 4158 aa2.92□□□□□ -1.94
MCF2-203ENST00000370576 ACACBO00763 2458 aa2.92□□□□□ -1.94
MCF2-203ENST00000370576 UMAD1C9J7I0 102 aa2.91□□□□□ -1.94
MCF2-203ENST00000370576 BUB1B-PAK6H3BSN5 160 aa2.91□□□□□ -1.94
MCF2-203ENST00000370576 SOD3P08294 240 aa2.91□□□□□ -1.94
MCF2-203ENST00000370576 LINC00869P0C866 280 aa2.91□□□□□ -1.94
MCF2-203ENST00000370576 GZMBP10144 247 aa2.91□□□□□ -1.94
MCF2-203ENST00000370576 AVPI1Q5T686 147 aa2.91□□□□□ -1.94
MCF2-203ENST00000370576 LYPD2Q6UXB3 125 aa2.91□□□□□ -1.94
MCF2-203ENST00000370576 TMEM252Q8N6L7 170 aa2.91□□□□□ -1.94
MCF2-203ENST00000370576 TMEM158Q8WZ71 300 aa2.91□□□□□ -1.94
MCF2-203ENST00000370576 DCUN1D4Q92564 292 aa2.91□□□□□ -1.94
MCF2-203ENST00000370576 PYGO2Q9BRQ0 406 aa2.91□□□□□ -1.94
MCF2-203ENST00000370576 ZNF462Q96JM2 2506 aa2.91□□□□□ -1.94
MCF2-203ENST00000370576 A0A087WWC5 75 aa2.91□□□□□ -1.94
MCF2-203ENST00000370576 RBFOX3A6NFN3 312 aa2.91□□□□□ -1.94
MCF2-203ENST00000370576 I3L521 148 aa2.91□□□□□ -1.94
MCF2-203ENST00000370576 K7EQG2 157 aa2.91□□□□□ -1.94
MCF2-203ENST00000370576 ZNHIT1O43257 154 aa2.91□□□□□ -1.94
MCF2-203ENST00000370576 APOA2P02652 100 aa2.91□□□□□ -1.94
MCF2-203ENST00000370576 SNCAP37840 140 aa2.91□□□□□ -1.94
MCF2-203ENST00000370576 OPRK1P41145 380 aa2.91□□□□□ -1.94
MCF2-203ENST00000370576 FABP9Q0Z7S8 132 aa2.91□□□□□ -1.94
MCF2-203ENST00000370576 TTC9CQ8N5M4 171 aa2.91□□□□□ -1.94
MCF2-203ENST00000370576 OR8S1Q8NH09 359 aa2.91□□□□□ -1.94
MCF2-203ENST00000370576 TRBV19A0A075B6N1 114 aa2.91□□□□□ -1.94
MCF2-203ENST00000370576 IGLC7A0M8Q6 106 aa2.91□□□□□ -1.94
MCF2-203ENST00000370576 MEIS3P1A6NDR6 274 aa2.91□□□□□ -1.94
MCF2-203ENST00000370576 H3BUA1 57 aa2.91□□□□□ -1.94
MCF2-203ENST00000370576 CXorf1O96002 111 aa2.91□□□□□ -1.94
MCF2-203ENST00000370576 COL8A2P25067 703 aa2.91□□□□□ -1.94
MCF2-203ENST00000370576 ATP5G3P48201 142 aa2.91□□□□□ -1.94
MCF2-203ENST00000370576 TCTEX1D2Q8WW35 142 aa2.91□□□□□ -1.94
MCF2-203ENST00000370576 GPER1Q99527 375 aa2.91□□□□□ -1.94
MCF2-203ENST00000370576 WDR61Q9GZS3 305 aaKnown RBP2.91□□□□□ -1.94
MCF2-203ENST00000370576 KCNIP2Q9NS61 270 aa2.91□□□□□ -1.94
MCF2-203ENST00000370576 MYO18BQ8IUG5 2567 aa2.9□□□□□ -1.94
MCF2-203ENST00000370576 SDCBPO00560 298 aaPredicted RBP2.9□□□□□ -1.94
MCF2-203ENST00000370576 ATP6V0E1O15342 81 aa2.9□□□□□ -1.94
MCF2-203ENST00000370576 PAX4O43316 350 aa2.9□□□□□ -1.94
MCF2-203ENST00000370576 RNASE2P10153 161 aaKnown RBP2.9□□□□□ -1.94
MCF2-203ENST00000370576 ZNF266Q14584 549 aa2.9□□□□□ -1.94
MCF2-203ENST00000370576 RUSC1-AS1Q66K80 236 aa2.9□□□□□ -1.94
MCF2-203ENST00000370576 TRPT1Q86TN4 253 aaKnown RBP2.9□□□□□ -1.94
MCF2-203ENST00000370576 CNEP1R1Q8N9A8 125 aa2.9□□□□□ -1.94
MCF2-203ENST00000370576 OR9G1Q8NH87 305 aa2.9□□□□□ -1.94
MCF2-203ENST00000370576 CIB3Q96Q77 187 aaPredicted RBP2.9□□□□□ -1.94
MCF2-203ENST00000370576 TXNDC17Q9BRA2 123 aa2.9□□□□□ -1.94
MCF2-203ENST00000370576 SEC11CQ9BY50 192 aa2.9□□□□□ -1.94
MCF2-203ENST00000370576 TP53TG3Q9ULZ0 132 aa2.9□□□□□ -1.94
MCF2-203ENST00000370576 CNOT1A5YKK6 2376 aaKnown RBP2.9□□□□□ -1.94
MCF2-203ENST00000370576 IGHV2-26A0A0B4J1V2 119 aa2.9□□□□□ -1.95
MCF2-203ENST00000370576 TMEM218A2RU14 115 aa2.9□□□□□ -1.95
MCF2-203ENST00000370576 NXPH4O95158 308 aa2.9□□□□□ -1.95
MCF2-203ENST00000370576 EEF1AKMT3Q96AZ1 226 aa2.9□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms