RNA–Protein interactions for RNA: ENST00000369747.7

UBE3D-203, Transcript of ubiquitin protein ligase E3D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3D, Length 1,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-203ENST00000369747 GRAMD2BQ96HH9 432 aa13.32□□□□□ -0.28
UBE3D-203ENST00000369747 CCDC140Q96MF4 163 aa13.32□□□□□ -0.28
UBE3D-203ENST00000369747 MRPL18Q9H0U6 180 aaKnown RBP13.32□□□□□ -0.28
UBE3D-203ENST00000369747 TENM1Q9UKZ4 2725 aa13.31□□□□□ -0.28
UBE3D-203ENST00000369747 IGHG4P01861 327 aa13.31□□□□□ -0.28
UBE3D-203ENST00000369747 CLEC3BP05452 202 aa13.31□□□□□ -0.28
UBE3D-203ENST00000369747 PF4V1P10720 104 aa13.31□□□□□ -0.28
UBE3D-203ENST00000369747 PDE6HQ13956 83 aa13.31□□□□□ -0.28
UBE3D-203ENST00000369747 LINC00322Q6ZN03 302 aaPredicted RBP13.31□□□□□ -0.28
UBE3D-203ENST00000369747 GNB1LQ9BYB4 327 aa13.31□□□□□ -0.28
UBE3D-203ENST00000369747 RABAC1Q9UI14 185 aa13.31□□□□□ -0.28
UBE3D-203ENST00000369747 FBN1P35555 2871 aaKnown RBP13.31□□□□□ -0.28
UBE3D-203ENST00000369747 IGHV3-35A0A0C4DH35 117 aa13.31□□□□□ -0.28
UBE3D-203ENST00000369747 IZUMO1RA6ND01 250 aa13.31□□□□□ -0.28
UBE3D-203ENST00000369747 SNURFLB1AK76 121 aa13.31□□□□□ -0.28
UBE3D-203ENST00000369747 PYY3Q5JQD4 70 aa13.31□□□□□ -0.28
UBE3D-203ENST00000369747 C16orf95Q9H693 158 aa13.31□□□□□ -0.28
UBE3D-203ENST00000369747 TRGV3P03979 118 aa13.3□□□□□ -0.28
UBE3D-203ENST00000369747 PSMB8P28062 276 aa13.3□□□□□ -0.28
UBE3D-203ENST00000369747 TOMM20LQ6UXN7 152 aa13.3□□□□□ -0.28
UBE3D-203ENST00000369747 ZFAND3Q9H8U3 227 aa13.3□□□□□ -0.28
UBE3D-203ENST00000369747 NIT2Q9NQR4 276 aa13.3□□□□□ -0.28
UBE3D-203ENST00000369747 TRBV6-1A0A0K0K1D8 114 aa13.29□□□□□ -0.28
UBE3D-203ENST00000369747 C19orf71A6NCJ1 209 aa13.29□□□□□ -0.28
UBE3D-203ENST00000369747 TPPP2P59282 170 aa13.29□□□□□ -0.28
UBE3D-203ENST00000369747 RPL19P84098 196 aaKnown RBP13.29□□□□□ -0.28
UBE3D-203ENST00000369747 CLEC19AQ6UXS0 136 aa13.29□□□□□ -0.28
UBE3D-203ENST00000369747 TMEM136Q6ZRR5 245 aa13.29□□□□□ -0.28
UBE3D-203ENST00000369747 EEF1AKMT3Q96AZ1 226 aa13.29□□□□□ -0.28
UBE3D-203ENST00000369747 ZNF492Q9P255 531 aa13.29□□□□□ -0.28
UBE3D-203ENST00000369747 IGHV3OR16-8A0A075B7F1 116 aa13.29□□□□□ -0.28
UBE3D-203ENST00000369747 BMPR1BO00238 502 aa13.29□□□□□ -0.28
UBE3D-203ENST00000369747 NDUFA7O95182 113 aa13.29□□□□□ -0.28
UBE3D-203ENST00000369747 AMBPP02760 352 aa13.29□□□□□ -0.28
UBE3D-203ENST00000369747 RPL7P18124 248 aaKnown RBP13.29□□□□□ -0.28
UBE3D-203ENST00000369747 RAB9AP51151 201 aa13.29□□□□□ -0.28
UBE3D-203ENST00000369747 MRPL54Q6P161 138 aaKnown RBP13.29□□□□□ -0.28
UBE3D-203ENST00000369747 PRNTQ86SH4 94 aa13.29□□□□□ -0.28
UBE3D-203ENST00000369747 KLHDC1Q8N7A1 406 aa13.29□□□□□ -0.28
UBE3D-203ENST00000369747 TMEM75Q8N9X5 138 aa13.29□□□□□ -0.28
UBE3D-203ENST00000369747 PACRGQ96M98 296 aaPredicted RBP13.29□□□□□ -0.28
UBE3D-203ENST00000369747 A0A1B0GUS0 222 aa13.28□□□□□ -0.28
UBE3D-203ENST00000369747 M0R3E3 92 aa13.28□□□□□ -0.28
UBE3D-203ENST00000369747 HIST2H2BDQ6DRA6 164 aa13.28□□□□□ -0.28
UBE3D-203ENST00000369747 WDR73Q6P4I2 378 aa13.28□□□□□ -0.28
UBE3D-203ENST00000369747 NUP35Q8NFH5 326 aa13.28□□□□□ -0.28
UBE3D-203ENST00000369747 TSKUQ8WUA8 353 aa13.28□□□□□ -0.28
UBE3D-203ENST00000369747 SMAD5-AS1Q9Y6J3 95 aa13.28□□□□□ -0.28
UBE3D-203ENST00000369747 TRBV7-1A0A0A6YYK4 115 aa13.27□□□□□ -0.28
UBE3D-203ENST00000369747 DIRC3C9JPN6 131 aa13.27□□□□□ -0.28
UBE3D-203ENST00000369747 H3BUA1 57 aa13.27□□□□□ -0.28
UBE3D-203ENST00000369747 MT-ND6P03923 174 aa13.27□□□□□ -0.28
UBE3D-203ENST00000369747 PRB4P10163 310 aaPredicted RBP13.27□□□□□ -0.28
UBE3D-203ENST00000369747 COX19Q49B96 90 aa13.27□□□□□ -0.28
UBE3D-203ENST00000369747 HAX1O00165 279 aa13.27□□□□□ -0.29
UBE3D-203ENST00000369747 BRI3O95415 125 aa13.27□□□□□ -0.29
UBE3D-203ENST00000369747 RPLP1P05386 114 aaKnown RBP13.27□□□□□ -0.29
UBE3D-203ENST00000369747 NEU1Q99519 415 aa13.27□□□□□ -0.29
UBE3D-203ENST00000369747 RPP21Q9H633 154 aaKnown RBP13.27□□□□□ -0.29
UBE3D-203ENST00000369747 GNB4Q9HAV0 340 aa13.27□□□□□ -0.29
UBE3D-203ENST00000369747 NAT8BQ9UHF3 227 aa13.27□□□□□ -0.29
UBE3D-203ENST00000369747 CLPSL1A2RUU4 121 aa13.26□□□□□ -0.29
UBE3D-203ENST00000369747 GRIFINA4D1Z8 144 aa13.26□□□□□ -0.29
UBE3D-203ENST00000369747 ATP5G2Q06055 141 aa13.26□□□□□ -0.29
UBE3D-203ENST00000369747 PSG3Q16557 428 aa13.26□□□□□ -0.29
UBE3D-203ENST00000369747 TCTEX1D4Q5JR98 221 aa13.26□□□□□ -0.29
UBE3D-203ENST00000369747 PRIMA1Q86XR5 153 aa13.26□□□□□ -0.29
UBE3D-203ENST00000369747 TMEM256Q8N2U0 113 aa13.26□□□□□ -0.29
UBE3D-203ENST00000369747 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.26□□□□□ -0.29
UBE3D-203ENST00000369747 WIPF2Q8TF74 440 aaPredicted RBP13.26□□□□□ -0.29
UBE3D-203ENST00000369747 AAMDCQ9H7C9 122 aa13.26□□□□□ -0.29
UBE3D-203ENST00000369747 RNF114Q9Y508 228 aa13.26□□□□□ -0.29
UBE3D-203ENST00000369747 FAM223BA6NKX1 122 aa13.25□□□□□ -0.29
UBE3D-203ENST00000369747 ZNF785A8K8V0 405 aa13.25□□□□□ -0.29
UBE3D-203ENST00000369747 HIGD1CA8MV81 97 aa13.25□□□□□ -0.29
UBE3D-203ENST00000369747 P01737 135 aa13.25□□□□□ -0.29
UBE3D-203ENST00000369747 IGHV3-11P01762 117 aa13.25□□□□□ -0.29
UBE3D-203ENST00000369747 PSG9Q00887 426 aa13.25□□□□□ -0.29
UBE3D-203ENST00000369747 FOXE3Q13461 319 aa13.25□□□□□ -0.29
UBE3D-203ENST00000369747 CT83Q5H943 113 aa13.25□□□□□ -0.29
UBE3D-203ENST00000369747 FAM223AQ8IWN6 122 aa13.25□□□□□ -0.29
UBE3D-203ENST00000369747 GBGT1Q8N5D6 347 aa13.25□□□□□ -0.29
UBE3D-203ENST00000369747 PSG8Q9UQ74 426 aa13.25□□□□□ -0.29
UBE3D-203ENST00000369747 NPIPB6E9PJ23 425 aa13.25□□□□□ -0.29
UBE3D-203ENST00000369747 K7EQM0 130 aa13.25□□□□□ -0.29
UBE3D-203ENST00000369747 S100A7P31151 101 aa13.25□□□□□ -0.29
UBE3D-203ENST00000369747 CDPF1Q6NVV7 123 aa13.25□□□□□ -0.29
UBE3D-203ENST00000369747 C11orf44Q8N8P7 122 aa13.25□□□□□ -0.29
UBE3D-203ENST00000369747 TP53TG3Q9ULZ0 132 aa13.25□□□□□ -0.29
UBE3D-203ENST00000369747 BUB3O43684 328 aa13.24□□□□□ -0.29
UBE3D-203ENST00000369747 NUPR1O60356 82 aa13.24□□□□□ -0.29
UBE3D-203ENST00000369747 HLA-DQA1P01909 254 aa13.24□□□□□ -0.29
UBE3D-203ENST00000369747 ELANEP08246 267 aa13.24□□□□□ -0.29
UBE3D-203ENST00000369747 CRISP2P16562 243 aa13.24□□□□□ -0.29
UBE3D-203ENST00000369747 RAB4BP61018 213 aa13.24□□□□□ -0.29
UBE3D-203ENST00000369747 RASL11AQ6T310 242 aa13.24□□□□□ -0.29
UBE3D-203ENST00000369747 RNF152Q8N8N0 203 aa13.24□□□□□ -0.29
UBE3D-203ENST00000369747 ZC2HC1AQ96GY0 325 aa13.24□□□□□ -0.29
UBE3D-203ENST00000369747 ATP6V0BQ99437 205 aa13.24□□□□□ -0.29
UBE3D-203ENST00000369747 ASCL2Q99929 193 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 92.9 ms