RNA–Protein interactions for RNA: ENST00000369530.5

CSDE1-204, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 3,774 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-204ENST00000369530 GAGE12FP0CL80 117 aa5.44□□□□□ -1.54
CSDE1-204ENST00000369530 GAGE12GP0CL81 117 aa5.44□□□□□ -1.54
CSDE1-204ENST00000369530 GAGE12IP0CL82 117 aa5.44□□□□□ -1.54
CSDE1-204ENST00000369530 SLC38A11Q08AI6 406 aa5.44□□□□□ -1.54
CSDE1-204ENST00000369530 GAGE4Q13068 117 aa5.44□□□□□ -1.54
CSDE1-204ENST00000369530 OXLD1Q5BKU9 147 aa5.44□□□□□ -1.54
CSDE1-204ENST00000369530 ZNF436-AS1Q8NC38 126 aaPredicted RBP5.44□□□□□ -1.54
CSDE1-204ENST00000369530 ADTRPQ96IZ2 230 aa5.44□□□□□ -1.54
CSDE1-204ENST00000369530 LINC01600Q96MT4 127 aa5.44□□□□□ -1.54
CSDE1-204ENST00000369530 PSENENQ9NZ42 101 aa5.44□□□□□ -1.54
CSDE1-204ENST00000369530 SPG11Q96JI7 2443 aa5.44□□□□□ -1.54
CSDE1-204ENST00000369530 XGP55808 180 aa5.44□□□□□ -1.54
CSDE1-204ENST00000369530 MZT1Q08AG7 82 aa5.44□□□□□ -1.54
CSDE1-204ENST00000369530 FHL3Q13643 280 aa5.44□□□□□ -1.54
CSDE1-204ENST00000369530 IZUMO4Q1ZYL8 232 aa5.44□□□□□ -1.54
CSDE1-204ENST00000369530 ITLN1Q8WWA0 313 aa5.44□□□□□ -1.54
CSDE1-204ENST00000369530 RITA1Q96K30 269 aa5.44□□□□□ -1.54
CSDE1-204ENST00000369530 NPCDR1Q9BY65 106 aa5.44□□□□□ -1.54
CSDE1-204ENST00000369530 MRPL32Q9BYC8 188 aaKnown RBP5.44□□□□□ -1.54
CSDE1-204ENST00000369530 MDFICQ9P1T7 246 aa5.44□□□□□ -1.54
CSDE1-204ENST00000369530 SIGLEC9Q9Y336 463 aa5.44□□□□□ -1.54
CSDE1-204ENST00000369530 PKHD1L1Q86WI1 4243 aa5.44□□□□□ -1.54
CSDE1-204ENST00000369530 IGKV1D-13A0A0B4J2D9 117 aa5.43□□□□□ -1.54
CSDE1-204ENST00000369530 A0A1B0GWB2 263 aa5.43□□□□□ -1.54
CSDE1-204ENST00000369530 TMEM30CPA0ZSE6 113 aa5.43□□□□□ -1.54
CSDE1-204ENST00000369530 FAM90A10PA6NDY2 464 aa5.43□□□□□ -1.54
CSDE1-204ENST00000369530 FAM90A20PA6NIJ5 464 aa5.43□□□□□ -1.54
CSDE1-204ENST00000369530 FAM90A7PA6NKC0 464 aa5.43□□□□□ -1.54
CSDE1-204ENST00000369530 FAM90A22PA8MWA6 464 aa5.43□□□□□ -1.54
CSDE1-204ENST00000369530 FAM90A12PA8MX19 464 aa5.43□□□□□ -1.54
CSDE1-204ENST00000369530 FAM90A5PA8MXJ8 464 aa5.43□□□□□ -1.54
CSDE1-204ENST00000369530 FAM90A23PA8MXZ1 464 aa5.43□□□□□ -1.54
CSDE1-204ENST00000369530 B5MCH6 92 aa5.43□□□□□ -1.54
CSDE1-204ENST00000369530 MT-ATP8P03928 68 aa5.43□□□□□ -1.54
CSDE1-204ENST00000369530 FAM90A15PP0C7V4 464 aa5.43□□□□□ -1.54
CSDE1-204ENST00000369530 FAM90A13PP0C7W8 464 aa5.43□□□□□ -1.54
CSDE1-204ENST00000369530 FAM90A14PP0C7W9 464 aa5.43□□□□□ -1.54
CSDE1-204ENST00000369530 FAM90A24PP0C7X0 464 aa5.43□□□□□ -1.54
CSDE1-204ENST00000369530 IGKV1-13P0DP09 117 aa5.43□□□□□ -1.54
CSDE1-204ENST00000369530 EGR1P18146 543 aa5.43□□□□□ -1.54
CSDE1-204ENST00000369530 OPRK1P41145 380 aa5.43□□□□□ -1.54
CSDE1-204ENST00000369530 TNFAIP6P98066 277 aaPredicted RBP5.43□□□□□ -1.54
CSDE1-204ENST00000369530 ZNF818PQ6ZRF7 136 aa5.43□□□□□ -1.54
CSDE1-204ENST00000369530 SBSPONQ8IVN8 264 aa5.43□□□□□ -1.54
CSDE1-204ENST00000369530 GATD1Q8NB37 220 aa5.43□□□□□ -1.54
CSDE1-204ENST00000369530 LIN7CQ9NUP9 197 aaKnown RBP5.43□□□□□ -1.54
CSDE1-204ENST00000369530 FLNBO75369 2602 aaKnown RBP5.43□□□□□ -1.54
CSDE1-204ENST00000369530 NPIPB11E5RHQ5 1161 aa5.43□□□□□ -1.54
CSDE1-204ENST00000369530 SNAI2O43623 268 aa5.43□□□□□ -1.54
CSDE1-204ENST00000369530 LY6HO94772 140 aa5.43□□□□□ -1.54
CSDE1-204ENST00000369530 IGLV2-8P01709 118 aa5.43□□□□□ -1.54
CSDE1-204ENST00000369530 ZNF816Q0VGE8 651 aaPredicted RBP5.43□□□□□ -1.54
CSDE1-204ENST00000369530 WFDC2Q14508 124 aa5.43□□□□□ -1.54
CSDE1-204ENST00000369530 SPATA3Q8NHX4 192 aa5.43□□□□□ -1.54
CSDE1-204ENST00000369530 DNAJC30Q96LL9 226 aa5.43□□□□□ -1.54
CSDE1-204ENST00000369530 DCTN5Q9BTE1 182 aa5.43□□□□□ -1.54
CSDE1-204ENST00000369530 CTNNBIP1Q9NSA3 81 aaPredicted RBP5.43□□□□□ -1.54
CSDE1-204ENST00000369530 SPANXCQ9NY87 97 aa5.43□□□□□ -1.54
CSDE1-204ENST00000369530 INSIG2Q9Y5U4 225 aa5.43□□□□□ -1.54
CSDE1-204ENST00000369530 FBLL1A6NHQ2 334 aaKnown RBP5.43□□□□□ -1.54
CSDE1-204ENST00000369530 SRRM5B3KS81 715 aa5.43□□□□□ -1.54
CSDE1-204ENST00000369530 LINC01619G3V211 115 aa5.43□□□□□ -1.54
CSDE1-204ENST00000369530 SMIM13P0DJ93 91 aa5.43□□□□□ -1.54
CSDE1-204ENST00000369530 FCGR2BP31994 310 aaPredicted RBP5.43□□□□□ -1.54
CSDE1-204ENST00000369530 VDAC2P45880 294 aaPredicted RBP5.43□□□□□ -1.54
CSDE1-204ENST00000369530 C19orf54Q5BKX5 351 aa5.43□□□□□ -1.54
CSDE1-204ENST00000369530 GDF5OSQ5U4N7 250 aa5.43□□□□□ -1.54
CSDE1-204ENST00000369530 CCL17Q92583 94 aa5.43□□□□□ -1.54
CSDE1-204ENST00000369530 RPEQ96AT9 228 aa5.43□□□□□ -1.54
CSDE1-204ENST00000369530 IGF2BP2-AS1Q96M15 143 aa5.43□□□□□ -1.54
CSDE1-204ENST00000369530 WNK2Q9Y3S1 2297 aa5.43□□□□□ -1.54
CSDE1-204ENST00000369530 SPINT2O43291 252 aa5.42□□□□□ -1.54
CSDE1-204ENST00000369530 MPDU1O75352 247 aa5.42□□□□□ -1.54
CSDE1-204ENST00000369530 ZNRF1Q8ND25 227 aa5.42□□□□□ -1.54
CSDE1-204ENST00000369530 HEYLQ9NQ87 328 aaPredicted RBP5.42□□□□□ -1.54
CSDE1-204ENST00000369530 TRBV6-6A0A0A6YYG2 114 aa5.42□□□□□ -1.54
CSDE1-204ENST00000369530 SCO2A0A1W2PP80 73 aa5.42□□□□□ -1.54
CSDE1-204ENST00000369530 PSPNO60542 156 aa5.42□□□□□ -1.54
CSDE1-204ENST00000369530 CXorf1O96002 111 aa5.42□□□□□ -1.54
CSDE1-204ENST00000369530 CA1P00915 261 aaPredicted RBP5.42□□□□□ -1.54
CSDE1-204ENST00000369530 IAPPP10997 89 aa5.42□□□□□ -1.54
CSDE1-204ENST00000369530 NTF3P20783 257 aa5.42□□□□□ -1.54
CSDE1-204ENST00000369530 EVI2AP22794 236 aa5.42□□□□□ -1.54
CSDE1-204ENST00000369530 PRDX2P32119 198 aa5.42□□□□□ -1.54
CSDE1-204ENST00000369530 RPS16P62249 146 aaKnown RBP5.42□□□□□ -1.54
CSDE1-204ENST00000369530 ATP5G2Q06055 141 aa5.42□□□□□ -1.54
CSDE1-204ENST00000369530 BPESC1Q9GZL8 116 aa5.42□□□□□ -1.54
CSDE1-204ENST00000369530 SOX21Q9Y651 276 aaPredicted RBP5.42□□□□□ -1.54
CSDE1-204ENST00000369530 CNIH1O95406 144 aa5.42□□□□□ -1.54
CSDE1-204ENST00000369530 TREML4Q6UXN2 200 aa5.42□□□□□ -1.54
CSDE1-204ENST00000369530 Q6ZRM9 215 aa5.42□□□□□ -1.54
CSDE1-204ENST00000369530 ZNF414Q96IQ9 312 aa5.42□□□□□ -1.54
CSDE1-204ENST00000369530 MAP1LC3CQ9BXW4 147 aa5.42□□□□□ -1.54
CSDE1-204ENST00000369530 NGBQ9NPG2 151 aa5.42□□□□□ -1.54
CSDE1-204ENST00000369530 METRNQ9UJH8 293 aa5.42□□□□□ -1.54
CSDE1-204ENST00000369530 WDR83OSQ9Y284 106 aa5.42□□□□□ -1.54
CSDE1-204ENST00000369530 DOCK11Q5JSL3 2073 aa5.41□□□□□ -1.54
CSDE1-204ENST00000369530 UBE2L5PA0A1B0GUS4 154 aa5.41□□□□□ -1.54
CSDE1-204ENST00000369530 PGLYRP1O75594 196 aaPredicted RBP5.41□□□□□ -1.54
CSDE1-204ENST00000369530 IGKV1-39P01597 117 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 82.6 ms