RNA–Protein interactions for RNA: ENST00000369462.5

BRCC3-204, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene BRCC3, Length 2,846 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-204ENST00000369462 SPAG8Q99932 426 aaPredicted RBP8.21□□□□□ -1.1
BRCC3-204ENST00000369462 MCRIP2Q9BUT9 160 aaKnown RBP8.21□□□□□ -1.1
BRCC3-204ENST00000369462 TRAV25A0A0B4J276 109 aa8.21□□□□□ -1.1
BRCC3-204ENST00000369462 FAM24BQ8N5W8 94 aa8.21□□□□□ -1.1
BRCC3-204ENST00000369462 TREM1Q9NP99 234 aa8.21□□□□□ -1.1
BRCC3-204ENST00000369462 RPH3ALQ9UNE2 315 aa8.21□□□□□ -1.1
BRCC3-204ENST00000369462 ZNF705FA8MVS1 300 aaPredicted RBP8.2□□□□□ -1.1
BRCC3-204ENST00000369462 C9JQL5 133 aa8.2□□□□□ -1.1
BRCC3-204ENST00000369462 ZNF688P0C7X2 276 aa8.2□□□□□ -1.1
BRCC3-204ENST00000369462 PEA15Q15121 130 aa8.2□□□□□ -1.1
BRCC3-204ENST00000369462 CMTM2Q8TAZ6 248 aa8.2□□□□□ -1.1
BRCC3-204ENST00000369462 TXNDC17Q9BRA2 123 aa8.2□□□□□ -1.1
BRCC3-204ENST00000369462 ID1P41134 155 aa8.2□□□□□ -1.1
BRCC3-204ENST00000369462 GNG5P63218 68 aa8.2□□□□□ -1.1
BRCC3-204ENST00000369462 SAMD13Q5VXD3 122 aa8.2□□□□□ -1.1
BRCC3-204ENST00000369462 LCN12Q6JVE5 192 aa8.2□□□□□ -1.1
BRCC3-204ENST00000369462 C5orf17Q8NAS9 161 aa8.2□□□□□ -1.1
BRCC3-204ENST00000369462 C20orf173Q96LM9 149 aa8.2□□□□□ -1.1
BRCC3-204ENST00000369462 OR4C46A6NHA9 309 aa8.19□□□□□ -1.1
BRCC3-204ENST00000369462 CEBPGP53567 150 aa8.19□□□□□ -1.1
BRCC3-204ENST00000369462 SNRPD3P62318 126 aaKnown RBP8.19□□□□□ -1.1
BRCC3-204ENST00000369462 PSG3Q16557 428 aa8.19□□□□□ -1.1
BRCC3-204ENST00000369462 EPDR1Q9UM22 224 aa8.19□□□□□ -1.1
BRCC3-204ENST00000369462 ZNF256Q9Y2P7 627 aaPredicted RBP8.19□□□□□ -1.1
BRCC3-204ENST00000369462 MGAM2Q2M2H8 2515 aa8.19□□□□□ -1.1
BRCC3-204ENST00000369462 SCO2A0A1W2PP80 73 aa8.19□□□□□ -1.1
BRCC3-204ENST00000369462 PDE6DO43924 150 aa8.19□□□□□ -1.1
BRCC3-204ENST00000369462 CSN1S1P47710 185 aa8.19□□□□□ -1.1
BRCC3-204ENST00000369462 NDUFA5Q16718 116 aa8.19□□□□□ -1.1
BRCC3-204ENST00000369462 PSMG4Q5JS54 123 aa8.19□□□□□ -1.1
BRCC3-204ENST00000369462 OR2K2Q8NGT1 345 aa8.19□□□□□ -1.1
BRCC3-204ENST00000369462 DEFB1P60022 68 aa8.18□□□□□ -1.1
BRCC3-204ENST00000369462 PRR31Q5SQ13 230 aa8.18□□□□□ -1.1
BRCC3-204ENST00000369462 ZNF738Q8NE65 137 aa8.18□□□□□ -1.1
BRCC3-204ENST00000369462 CLEC5AQ9NY25 188 aa8.18□□□□□ -1.1
BRCC3-204ENST00000369462 TRAV2A0A0B4J234 112 aa8.18□□□□□ -1.1
BRCC3-204ENST00000369462 PRAC2D3DTV9 90 aa8.18□□□□□ -1.1
BRCC3-204ENST00000369462 TCRAP04437 139 aa8.18□□□□□ -1.1
BRCC3-204ENST00000369462 SRP19P09132 144 aaKnown RBP8.18□□□□□ -1.1
BRCC3-204ENST00000369462 EIF4E3Q8N5X7 224 aaKnown RBP8.18□□□□□ -1.1
BRCC3-204ENST00000369462 CYB561D1Q8N8Q1 229 aa8.18□□□□□ -1.1
BRCC3-204ENST00000369462 RPUSD4Q96CM3 377 aaKnown RBP8.18□□□□□ -1.1
BRCC3-204ENST00000369462 SMDT1Q9H4I9 107 aa8.18□□□□□ -1.1
BRCC3-204ENST00000369462 F6UZH7 168 aa8.17□□□□□ -1.1
BRCC3-204ENST00000369462 PEX7O00628 323 aa8.17□□□□□ -1.1
BRCC3-204ENST00000369462 UQCC3Q6UW78 93 aa8.17□□□□□ -1.1
BRCC3-204ENST00000369462 GOLT1AQ6ZVE7 132 aa8.17□□□□□ -1.1
BRCC3-204ENST00000369462 HIST1H2BAQ96A08 127 aa8.17□□□□□ -1.1
BRCC3-204ENST00000369462 LINC00479Q96M42 142 aa8.17□□□□□ -1.1
BRCC3-204ENST00000369462 PRELID1Q9Y255 219 aa8.17□□□□□ -1.1
BRCC3-204ENST00000369462 DIRC3C9JPN6 131 aa8.17□□□□□ -1.1
BRCC3-204ENST00000369462 TMEM250H0YL14 139 aa8.17□□□□□ -1.1
BRCC3-204ENST00000369462 SGK494Q96LW2 274 aa8.17□□□□□ -1.1
BRCC3-204ENST00000369462 ATG101Q9BSB4 218 aa8.17□□□□□ -1.1
BRCC3-204ENST00000369462 DERL1Q9BUN8 251 aa8.17□□□□□ -1.1
BRCC3-204ENST00000369462 SLC35B3Q9H1N7 401 aa8.17□□□□□ -1.1
BRCC3-204ENST00000369462 NOTCH1P46531 2555 aa8.17□□□□□ -1.1
BRCC3-204ENST00000369462 IGKV2-40A0A087WW87 121 aaPredicted RBP8.16□□□□□ -1.1
BRCC3-204ENST00000369462 F6UB75 175 aa8.16□□□□□ -1.1
BRCC3-204ENST00000369462 IGKV2D-40P01614 121 aaPredicted RBP8.16□□□□□ -1.1
BRCC3-204ENST00000369462 DEFB131AP59861 70 aa8.16□□□□□ -1.1
BRCC3-204ENST00000369462 KRTAP21-3Q3LHN1 58 aa8.16□□□□□ -1.1
BRCC3-204ENST00000369462 MRPL53Q96EL3 112 aaKnown RBP8.16□□□□□ -1.1
BRCC3-204ENST00000369462 TCEAL7Q9BRU2 100 aa8.16□□□□□ -1.1
BRCC3-204ENST00000369462 CMYA5Q8N3K9 4069 aa8.16□□□□□ -1.1
BRCC3-204ENST00000369462 TRAV8-1A0A0A6YYK1 113 aa8.16□□□□□ -1.1
BRCC3-204ENST00000369462 TRAV34A0A0B4J273 112 aa8.16□□□□□ -1.1
BRCC3-204ENST00000369462 ZNF705DP0CH99 300 aaPredicted RBP8.16□□□□□ -1.1
BRCC3-204ENST00000369462 ZNF705BP0CI00 300 aaPredicted RBP8.16□□□□□ -1.1
BRCC3-204ENST00000369462 WIPF1O43516 503 aa8.16□□□□□ -1.1
BRCC3-204ENST00000369462 CD7P09564 240 aa8.16□□□□□ -1.1
BRCC3-204ENST00000369462 SFTA3P0C7M3 94 aa8.16□□□□□ -1.1
BRCC3-204ENST00000369462 BEAN1Q3B7T3 259 aa8.16□□□□□ -1.1
BRCC3-204ENST00000369462 ODF3L2Q3SX64 289 aa8.16□□□□□ -1.1
BRCC3-204ENST00000369462 C2CD4CQ8TF44 421 aa8.16□□□□□ -1.1
BRCC3-204ENST00000369462 C11orf52Q96A22 123 aa8.16□□□□□ -1.1
BRCC3-204ENST00000369462 AKR1C3P42330 323 aa8.15□□□□□ -1.1
BRCC3-204ENST00000369462 ZNF124Q15973 351 aa8.15□□□□□ -1.1
BRCC3-204ENST00000369462 ZNF674Q2M3X9 581 aa8.15□□□□□ -1.1
BRCC3-204ENST00000369462 ARL6IP6Q8N6S5 226 aa8.15□□□□□ -1.1
BRCC3-204ENST00000369462 MAP6D1Q9H9H5 199 aa8.15□□□□□ -1.1
BRCC3-204ENST00000369462 NBEAL1Q6ZS30 2694 aa8.15□□□□□ -1.1
BRCC3-204ENST00000369462 K7EQM0 130 aa8.15□□□□□ -1.11
BRCC3-204ENST00000369462 RPL35P42766 123 aaKnown RBP8.15□□□□□ -1.11
BRCC3-204ENST00000369462 CNN1P51911 297 aaKnown RBP8.15□□□□□ -1.11
BRCC3-204ENST00000369462 SOHLH1Q5JUK2 328 aa8.15□□□□□ -1.11
BRCC3-204ENST00000369462 APRG1Q8IVJ8 170 aa8.15□□□□□ -1.11
BRCC3-204ENST00000369462 VGLL1Q99990 258 aa8.15□□□□□ -1.11
BRCC3-204ENST00000369462 GPR61Q9BZJ8 451 aa8.15□□□□□ -1.11
BRCC3-204ENST00000369462 PARLQ9H300 379 aa8.15□□□□□ -1.11
BRCC3-204ENST00000369462 AGRNO00468 2067 aa8.14□□□□□ -1.11
BRCC3-204ENST00000369462 TMEM218A2RU14 115 aa8.14□□□□□ -1.11
BRCC3-204ENST00000369462 ERCC8Q13216 396 aa8.14□□□□□ -1.11
BRCC3-204ENST00000369462 GDF5OSQ5U4N7 250 aa8.14□□□□□ -1.11
BRCC3-204ENST00000369462 OR8A1Q8NGG7 326 aa8.14□□□□□ -1.11
BRCC3-204ENST00000369462 OR11H12B2RN74 326 aa8.14□□□□□ -1.11
BRCC3-204ENST00000369462 HIST1H1AQ02539 215 aaPredicted RBP8.14□□□□□ -1.11
BRCC3-204ENST00000369462 OR10J6PQ8NGY7 276 aa8.14□□□□□ -1.11
BRCC3-204ENST00000369462 DNHD1Q96M86 4753 aa8.13□□□□□ -1.11
BRCC3-204ENST00000369462 NDUFS6O75380 124 aaKnown RBP8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 100.7 ms