RNA–Protein interactions for RNA: ENST00000368533.7

TPM3-212, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 3,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-212ENST00000368533 OR11H6Q8NGC7 330 aa8.42□□□□□ -1.06
TPM3-212ENST00000368533 TMEM167AQ8TBQ9 72 aa8.42□□□□□ -1.06
TPM3-212ENST00000368533 C19orf24Q9BVV8 132 aa8.42□□□□□ -1.06
TPM3-212ENST00000368533 LINC00527Q9UJ94 153 aa8.42□□□□□ -1.06
TPM3-212ENST00000368533 A0A1W2PRE2 83 aa8.42□□□□□ -1.06
TPM3-212ENST00000368533 RPL27AP46776 148 aaKnown RBP8.42□□□□□ -1.06
TPM3-212ENST00000368533 ATP5IP56385 69 aaPredicted RBP8.42□□□□□ -1.06
TPM3-212ENST00000368533 GNG5P63218 68 aa8.42□□□□□ -1.06
TPM3-212ENST00000368533 LY6EQ16553 131 aa8.42□□□□□ -1.06
TPM3-212ENST00000368533 LINC00305Q7Z4B0 112 aa8.42□□□□□ -1.06
TPM3-212ENST00000368533 SLC25A2Q9BXI2 301 aa8.42□□□□□ -1.06
TPM3-212ENST00000368533 C7orf69Q9H7B7 122 aa8.42□□□□□ -1.06
TPM3-212ENST00000368533 ZNF331Q9NQX6 463 aaPredicted RBP8.42□□□□□ -1.06
TPM3-212ENST00000368533 MYO9AB2RTY4 2548 aa8.41□□□□□ -1.06
TPM3-212ENST00000368533 CENPVL3A0A0U1RRI6 287 aa8.41□□□□□ -1.06
TPM3-212ENST00000368533 AVPP01185 164 aa8.41□□□□□ -1.06
TPM3-212ENST00000368533 GDF5OSQ5U4N7 250 aa8.41□□□□□ -1.06
TPM3-212ENST00000368533 OR1L4Q8NGR5 311 aa8.41□□□□□ -1.06
TPM3-212ENST00000368533 HIF1ANQ9NWT6 349 aa8.41□□□□□ -1.06
TPM3-212ENST00000368533 ODF3BA8MYP8 253 aa8.41□□□□□ -1.06
TPM3-212ENST00000368533 FSTL3O95633 263 aa8.41□□□□□ -1.06
TPM3-212ENST00000368533 IGHV3-23P01764 117 aa8.41□□□□□ -1.06
TPM3-212ENST00000368533 SLC25A5P05141 298 aaKnown RBP8.41□□□□□ -1.06
TPM3-212ENST00000368533 CEACAM3P40198 252 aa8.41□□□□□ -1.06
TPM3-212ENST00000368533 ZNF138P52744 262 aa8.41□□□□□ -1.06
TPM3-212ENST00000368533 C8orf31Q8N9H6 132 aa8.41□□□□□ -1.06
TPM3-212ENST00000368533 TMEM116Q8NCL8 245 aa8.41□□□□□ -1.06
TPM3-212ENST00000368533 CFHR4Q92496 578 aa8.41□□□□□ -1.06
TPM3-212ENST00000368533 MRPL32Q9BYC8 188 aaKnown RBP8.41□□□□□ -1.06
TPM3-212ENST00000368533 PEF1Q9UBV8 284 aaKnown RBP8.41□□□□□ -1.06
TPM3-212ENST00000368533 LY96Q9Y6Y9 160 aa8.41□□□□□ -1.06
TPM3-212ENST00000368533 PLA2G2AP14555 144 aa8.4□□□□□ -1.06
TPM3-212ENST00000368533 MFAP2P55001 183 aa8.4□□□□□ -1.06
TPM3-212ENST00000368533 SRSF12Q8WXF0 261 aaKnown RBP8.4□□□□□ -1.06
TPM3-212ENST00000368533 OSTCQ9NRP0 149 aa8.4□□□□□ -1.06
TPM3-212ENST00000368533 NF1P21359 2839 aa8.4□□□□□ -1.06
TPM3-212ENST00000368533 TCRBV4S1A1TA0A5B7 111 aa8.4□□□□□ -1.06
TPM3-212ENST00000368533 AMY1AP04745 511 aa8.4□□□□□ -1.06
TPM3-212ENST00000368533 WDR73Q6P4I2 378 aa8.4□□□□□ -1.06
TPM3-212ENST00000368533 FAM167A-AS1Q96KT0 104 aa8.4□□□□□ -1.06
TPM3-212ENST00000368533 TMEM70Q9BUB7 260 aa8.4□□□□□ -1.06
TPM3-212ENST00000368533 TRAV9-1A0A075B6T8 112 aa8.4□□□□□ -1.07
TPM3-212ENST00000368533 PGPA6NDG6 321 aa8.4□□□□□ -1.07
TPM3-212ENST00000368533 RBP4P02753 201 aa8.4□□□□□ -1.07
TPM3-212ENST00000368533 PEX7O00628 323 aa8.39□□□□□ -1.07
TPM3-212ENST00000368533 ISLRO14498 428 aa8.39□□□□□ -1.07
TPM3-212ENST00000368533 NBR2O15453 112 aa8.39□□□□□ -1.07
TPM3-212ENST00000368533 CD5LO43866 347 aa8.39□□□□□ -1.07
TPM3-212ENST00000368533 RPS20P60866 119 aaKnown RBP8.39□□□□□ -1.07
TPM3-212ENST00000368533 NDPQ00604 133 aa8.39□□□□□ -1.07
TPM3-212ENST00000368533 PATE2Q6UY27 113 aa8.39□□□□□ -1.07
TPM3-212ENST00000368533 C12orf54Q6X4T0 127 aa8.39□□□□□ -1.07
TPM3-212ENST00000368533 LINC01548A6NM66 108 aa8.39□□□□□ -1.07
TPM3-212ENST00000368533 NPFFO15130 113 aa8.39□□□□□ -1.07
TPM3-212ENST00000368533 TGFAP01135 160 aa8.39□□□□□ -1.07
TPM3-212ENST00000368533 AP1S3Q96PC3 154 aa8.39□□□□□ -1.07
TPM3-212ENST00000368533 FLNBO75369 2602 aaKnown RBP8.38□□□□□ -1.07
TPM3-212ENST00000368533 TRAV26-1A0A087WT03 109 aa8.38□□□□□ -1.07
TPM3-212ENST00000368533 TRBV9A0A0B4J1U6 114 aa8.38□□□□□ -1.07
TPM3-212ENST00000368533 IGHV3-35A0A0C4DH35 117 aa8.38□□□□□ -1.07
TPM3-212ENST00000368533 J3QKU1 62 aa8.38□□□□□ -1.07
TPM3-212ENST00000368533 MT-ND6P03923 174 aa8.38□□□□□ -1.07
TPM3-212ENST00000368533 PLP1P60201 277 aa8.38□□□□□ -1.07
TPM3-212ENST00000368533 PRSS57Q6UWY2 283 aa8.38□□□□□ -1.07
TPM3-212ENST00000368533 URB1-AS1Q96HZ7 61 aa8.38□□□□□ -1.07
TPM3-212ENST00000368533 IGHV3OR16-8A0A075B7F1 116 aa8.38□□□□□ -1.07
TPM3-212ENST00000368533 SMAD7O15105 426 aaKnown RBP8.38□□□□□ -1.07
TPM3-212ENST00000368533 IGLV2-8P01709 118 aa8.38□□□□□ -1.07
TPM3-212ENST00000368533 HLA-DQA1P01909 254 aa8.38□□□□□ -1.07
TPM3-212ENST00000368533 TM4SF20Q53R12 229 aa8.38□□□□□ -1.07
TPM3-212ENST00000368533 MSMBP08118 114 aa8.38□□□□□ -1.07
TPM3-212ENST00000368533 GPR183P32249 361 aa8.38□□□□□ -1.07
TPM3-212ENST00000368533 UBE2E1P51965 193 aa8.38□□□□□ -1.07
TPM3-212ENST00000368533 LYZP61626 148 aa8.38□□□□□ -1.07
TPM3-212ENST00000368533 ECSCRQ19T08 205 aa8.38□□□□□ -1.07
TPM3-212ENST00000368533 ZNF329Q86UD4 541 aa8.38□□□□□ -1.07
TPM3-212ENST00000368533 AJUBAQ96IF1 538 aa8.38□□□□□ -1.07
TPM3-212ENST00000368533 TEX48A0A1B0GUV7 120 aa8.37□□□□□ -1.07
TPM3-212ENST00000368533 NDUFS8O00217 210 aa8.37□□□□□ -1.07
TPM3-212ENST00000368533 RAB9AP51151 201 aa8.37□□□□□ -1.07
TPM3-212ENST00000368533 TEX45Q8NA69 505 aa8.37□□□□□ -1.07
TPM3-212ENST00000368533 IGKV1D-37A0A075B6S9 117 aa8.37□□□□□ -1.07
TPM3-212ENST00000368533 VWC2LB2RUY7 222 aa8.37□□□□□ -1.07
TPM3-212ENST00000368533 TEX22C9J3V5 150 aa8.37□□□□□ -1.07
TPM3-212ENST00000368533 CRYGBP07316 175 aa8.37□□□□□ -1.07
TPM3-212ENST00000368533 UFSP1Q6NVU6 142 aa8.37□□□□□ -1.07
TPM3-212ENST00000368533 IL17RELQ6ZVW7 336 aa8.37□□□□□ -1.07
TPM3-212ENST00000368533 Q96MF0 132 aa8.37□□□□□ -1.07
TPM3-212ENST00000368533 DUX5Q96PT3 197 aa8.37□□□□□ -1.07
TPM3-212ENST00000368533 SYS1-DBNDD2H3BUS1 97 aa8.36□□□□□ -1.07
TPM3-212ENST00000368533 C5orf64Q2M2E5 130 aa8.36□□□□□ -1.07
TPM3-212ENST00000368533 BCL6BQ8N143 479 aaPredicted RBP8.36□□□□□ -1.07
TPM3-212ENST00000368533 IGF2BP2-AS1Q96M15 143 aa8.36□□□□□ -1.07
TPM3-212ENST00000368533 ST20Q9HBF5 79 aa8.36□□□□□ -1.07
TPM3-212ENST00000368533 IZUMO1RA6ND01 250 aa8.36□□□□□ -1.07
TPM3-212ENST00000368533 STXBP6Q8NFX7 210 aa8.36□□□□□ -1.07
TPM3-212ENST00000368533 FXYD5Q96DB9 178 aa8.36□□□□□ -1.07
TPM3-212ENST00000368533 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.36□□□□□ -1.07
TPM3-212ENST00000368533 PSMB11A5LHX3 300 aa8.36□□□□□ -1.07
TPM3-212ENST00000368533 HIGD1CA8MV81 97 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms