RNA–Protein interactions for RNA: ENST00000368213.9

PTPRK-205, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 5,816 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-205ENST00000368213 DMRTA1Q5VZB9 504 aa8.56□□□□□ -1.04
PTPRK-205ENST00000368213 LURAP1LQ8IV03 231 aa8.56□□□□□ -1.04
PTPRK-205ENST00000368213 C14orf178Q8N769 122 aaPredicted RBP8.56□□□□□ -1.04
PTPRK-205ENST00000368213 PKIAP61925 76 aa8.56□□□□□ -1.04
PTPRK-205ENST00000368213 PDE6HQ13956 83 aa8.56□□□□□ -1.04
PTPRK-205ENST00000368213 RPP25LQ8N5L8 163 aaKnown RBP8.56□□□□□ -1.04
PTPRK-205ENST00000368213 IGFBPL1Q8WX77 278 aa8.56□□□□□ -1.04
PTPRK-205ENST00000368213 TRAV9-1A0A075B6T8 112 aa8.55□□□□□ -1.04
PTPRK-205ENST00000368213 RPL23P62829 140 aaKnown RBP8.55□□□□□ -1.04
PTPRK-205ENST00000368213 BLCAPP62952 87 aa8.55□□□□□ -1.04
PTPRK-205ENST00000368213 NUDT11Q96G61 164 aa8.55□□□□□ -1.04
PTPRK-205ENST00000368213 IGHV3-16A0A0C4DH30 117 aa8.55□□□□□ -1.04
PTPRK-205ENST00000368213 A0A0G2JRQ6 117 aa8.55□□□□□ -1.04
PTPRK-205ENST00000368213 FNDC10F2Z333 226 aa8.55□□□□□ -1.04
PTPRK-205ENST00000368213 SSBP2P81877 361 aaPredicted RBP8.55□□□□□ -1.04
PTPRK-205ENST00000368213 TSKUQ8WUA8 353 aa8.55□□□□□ -1.04
PTPRK-205ENST00000368213 WISP2O76076 250 aa8.55□□□□□ -1.04
PTPRK-205ENST00000368213 TTC9CQ8N5M4 171 aa8.55□□□□□ -1.04
PTPRK-205ENST00000368213 OCC1Q8TAD7 63 aa8.55□□□□□ -1.04
PTPRK-205ENST00000368213 PIFOQ8TCI5 191 aa8.55□□□□□ -1.04
PTPRK-205ENST00000368213 TRAV12-2A0A075B6T6 113 aa8.55□□□□□ -1.04
PTPRK-205ENST00000368213 PGPEP1LA6NFU8 196 aa8.55□□□□□ -1.04
PTPRK-205ENST00000368213 CDKN1BP46527 198 aa8.55□□□□□ -1.04
PTPRK-205ENST00000368213 ZNF134P52741 427 aa8.55□□□□□ -1.04
PTPRK-205ENST00000368213 SLC25A34Q6PIV7 304 aa8.55□□□□□ -1.04
PTPRK-205ENST00000368213 LYZL1Q6UWQ5 148 aa8.55□□□□□ -1.04
PTPRK-205ENST00000368213 ACACBO00763 2458 aa8.55□□□□□ -1.04
PTPRK-205ENST00000368213 S100A7L2Q5SY68 101 aa8.55□□□□□ -1.04
PTPRK-205ENST00000368213 TRAV8-1A0A0A6YYK1 113 aa8.54□□□□□ -1.04
PTPRK-205ENST00000368213 RHODO00212 210 aa8.54□□□□□ -1.04
PTPRK-205ENST00000368213 ATOH7Q8N100 152 aa8.54□□□□□ -1.04
PTPRK-205ENST00000368213 AGMATQ9BSE5 352 aa8.54□□□□□ -1.04
PTPRK-205ENST00000368213 LSM4Q9Y4Z0 139 aaKnown RBP8.54□□□□□ -1.04
PTPRK-205ENST00000368213 IGHV1OR15-1A0A075B7D0 117 aa8.54□□□□□ -1.04
PTPRK-205ENST00000368213 LOC102724200A0A096LPH7 203 aaPredicted RBP8.54□□□□□ -1.04
PTPRK-205ENST00000368213 A0A0U1RRA0 63 aa8.54□□□□□ -1.04
PTPRK-205ENST00000368213 C8orf31Q8N9H6 132 aa8.54□□□□□ -1.04
PTPRK-205ENST00000368213 LRRK1Q38SD2 2015 aa8.54□□□□□ -1.04
PTPRK-205ENST00000368213 DNAJC9-AS1A6NH13 148 aa8.53□□□□□ -1.04
PTPRK-205ENST00000368213 CD5LO43866 347 aa8.53□□□□□ -1.04
PTPRK-205ENST00000368213 GHRHP01286 108 aa8.53□□□□□ -1.04
PTPRK-205ENST00000368213 Q6ZRM9 215 aa8.53□□□□□ -1.04
PTPRK-205ENST00000368213 RNF138Q8WVD3 245 aa8.53□□□□□ -1.04
PTPRK-205ENST00000368213 COL4A3Q01955 1670 aa8.53□□□□□ -1.04
PTPRK-205ENST00000368213 ZNF561-AS1K7EIQ3 104 aa8.53□□□□□ -1.04
PTPRK-205ENST00000368213 VCYO14598 125 aa8.53□□□□□ -1.04
PTPRK-205ENST00000368213 C6orf226Q5I0X4 101 aa8.53□□□□□ -1.04
PTPRK-205ENST00000368213 TEX43Q6ZNM6 134 aa8.53□□□□□ -1.04
PTPRK-205ENST00000368213 C11orf53Q8IXP5 236 aa8.53□□□□□ -1.04
PTPRK-205ENST00000368213 MBD3L1Q8WWY6 194 aa8.53□□□□□ -1.04
PTPRK-205ENST00000368213 IGF2BP2-AS1Q96M15 143 aa8.53□□□□□ -1.04
PTPRK-205ENST00000368213 LHBP01229 141 aa8.53□□□□□ -1.04
PTPRK-205ENST00000368213 MYCNOSP40205 109 aa8.53□□□□□ -1.04
PTPRK-205ENST00000368213 PGPEP1Q9NXJ5 209 aa8.53□□□□□ -1.04
PTPRK-205ENST00000368213 IGHV3-64A0A075B6Q5 118 aa8.53□□□□□ -1.04
PTPRK-205ENST00000368213 TRAV13-1A0A0B4J241 112 aa8.53□□□□□ -1.04
PTPRK-205ENST00000368213 NCR2O95944 276 aa8.53□□□□□ -1.04
PTPRK-205ENST00000368213 LINC01549A6NIU2 74 aa8.52□□□□□ -1.04
PTPRK-205ENST00000368213 VWC2Q2TAL6 325 aa8.52□□□□□ -1.04
PTPRK-205ENST00000368213 ABCA1O95477 2261 aa8.52□□□□□ -1.05
PTPRK-205ENST00000368213 A0A096LPF7 62 aa8.52□□□□□ -1.05
PTPRK-205ENST00000368213 HBDP02042 147 aa8.52□□□□□ -1.05
PTPRK-205ENST00000368213 CST9LQ9H4G1 147 aa8.52□□□□□ -1.05
PTPRK-205ENST00000368213 CHTOPQ9Y3Y2 248 aaKnown RBP8.52□□□□□ -1.05
PTPRK-205ENST00000368213 SMAD5-AS1Q9Y6J3 95 aa8.52□□□□□ -1.05
PTPRK-205ENST00000368213 HIVEP2P31629 2446 aa8.52□□□□□ -1.05
PTPRK-205ENST00000368213 ZNF815PA8K554 130 aa8.52□□□□□ -1.05
PTPRK-205ENST00000368213 PAX4O43316 350 aa8.52□□□□□ -1.05
PTPRK-205ENST00000368213 BCL6BQ8N143 479 aaPredicted RBP8.52□□□□□ -1.05
PTPRK-205ENST00000368213 TRBV25-1A0A075B6N4 114 aa8.52□□□□□ -1.05
PTPRK-205ENST00000368213 ARMS2P0C7Q2 107 aa8.52□□□□□ -1.05
PTPRK-205ENST00000368213 LAGE3Q14657 143 aa8.52□□□□□ -1.05
PTPRK-205ENST00000368213 PRSS57Q6UWY2 283 aa8.52□□□□□ -1.05
PTPRK-205ENST00000368213 SMPXQ9UHP9 88 aa8.52□□□□□ -1.05
PTPRK-205ENST00000368213 SCGB1A1P11684 91 aa8.51□□□□□ -1.05
PTPRK-205ENST00000368213 WT1-ASQ06250 92 aa8.51□□□□□ -1.05
PTPRK-205ENST00000368213 DLX4Q92988 240 aaPredicted RBP8.51□□□□□ -1.05
PTPRK-205ENST00000368213 CSTL1Q9H114 145 aa8.51□□□□□ -1.05
PTPRK-205ENST00000368213 JPT2Q9H910 190 aa8.51□□□□□ -1.05
PTPRK-205ENST00000368213 SEC11AP67812 179 aa8.51□□□□□ -1.05
PTPRK-205ENST00000368213 CD300EQ496F6 205 aaPredicted RBP8.51□□□□□ -1.05
PTPRK-205ENST00000368213 MS4A6AQ9H2W1 248 aa8.51□□□□□ -1.05
PTPRK-205ENST00000368213 ARFGEF3Q5TH69 2177 aa8.51□□□□□ -1.05
PTPRK-205ENST00000368213 A0A087X0M5 115 aa8.51□□□□□ -1.05
PTPRK-205ENST00000368213 A0A1B0GX30 115 aa8.51□□□□□ -1.05
PTPRK-205ENST00000368213 MORN3Q6PF18 240 aaPredicted RBP8.51□□□□□ -1.05
PTPRK-205ENST00000368213 SPAG8Q99932 426 aaPredicted RBP8.51□□□□□ -1.05
PTPRK-205ENST00000368213 SLAQ13239 276 aa8.51□□□□□ -1.05
PTPRK-205ENST00000368213 ATP6V0BQ99437 205 aa8.51□□□□□ -1.05
PTPRK-205ENST00000368213 PMCHL2Q9BQD1 86 aa8.51□□□□□ -1.05
PTPRK-205ENST00000368213 A8MWV9 139 aa8.5□□□□□ -1.05
PTPRK-205ENST00000368213 IGHV4-31P0DP07 118 aa8.5□□□□□ -1.05
PTPRK-205ENST00000368213 FOXI2Q6ZQN5 318 aa8.5□□□□□ -1.05
PTPRK-205ENST00000368213 CITED2Q99967 270 aaPredicted RBP8.5□□□□□ -1.05
PTPRK-205ENST00000368213 A0A0J9YY99 117 aa8.5□□□□□ -1.05
PTPRK-205ENST00000368213 RASL10AQ92737 203 aa8.5□□□□□ -1.05
PTPRK-205ENST00000368213 KLK5Q9Y337 293 aaPredicted RBP8.5□□□□□ -1.05
PTPRK-205ENST00000368213 MALRD1Q5VYJ5 2156 aa8.5□□□□□ -1.05
PTPRK-205ENST00000368213 TEX48A0A1B0GUV7 120 aa8.5□□□□□ -1.05
PTPRK-205ENST00000368213 FABP2P12104 132 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms