RNA–Protein interactions for RNA: ENST00000367255.9

SYNE1-207, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SYNE1, Length 27,748 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-207ENST00000367255 IGLC7A0M8Q6 106 aa3.04□□□□□ -1.92
SYNE1-207ENST00000367255 APOHP02749 345 aaPredicted RBP3.04□□□□□ -1.92
SYNE1-207ENST00000367255 PFN2P35080 140 aa3.04□□□□□ -1.92
SYNE1-207ENST00000367255 APRG1Q8IVJ8 170 aa3.04□□□□□ -1.92
SYNE1-207ENST00000367255 MCM3APO60318 1980 aa3.04□□□□□ -1.92
SYNE1-207ENST00000367255 IGHV3OR16-13A0A075B7E8 117 aa3.04□□□□□ -1.92
SYNE1-207ENST00000367255 IGHV3-74A0A0B4J1X5 117 aa3.04□□□□□ -1.92
SYNE1-207ENST00000367255 SLC25A29Q8N8R3 303 aa3.04□□□□□ -1.92
SYNE1-207ENST00000367255 HES7Q9BYE0 225 aa3.04□□□□□ -1.92
SYNE1-207ENST00000367255 POLEQ07864 2286 aa3.04□□□□□ -1.92
SYNE1-207ENST00000367255 KIAA1551Q9HCM1 1747 aa3.04□□□□□ -1.92
SYNE1-207ENST00000367255 MDS2Q8NDY4 140 aa3.04□□□□□ -1.92
SYNE1-207ENST00000367255 IGHV3-72A0A0B4J1Y9 119 aa3.04□□□□□ -1.92
SYNE1-207ENST00000367255 F8WEM9 126 aa3.04□□□□□ -1.92
SYNE1-207ENST00000367255 GFRA3O60609 400 aa3.04□□□□□ -1.92
SYNE1-207ENST00000367255 ZNF581Q9P0T4 197 aa3.04□□□□□ -1.92
SYNE1-207ENST00000367255 IGHV3OR16-8A0A075B7F1 116 aa3.04□□□□□ -1.92
SYNE1-207ENST00000367255 CTSGP08311 255 aa3.04□□□□□ -1.92
SYNE1-207ENST00000367255 ADCYAP1P18509 176 aa3.04□□□□□ -1.92
SYNE1-207ENST00000367255 IGHV3OR16-10A0A075B7F0 116 aa3.04□□□□□ -1.92
SYNE1-207ENST00000367255 TRGV5A0A0B4J1U4 118 aa3.04□□□□□ -1.92
SYNE1-207ENST00000367255 ZNF138P52744 262 aa3.04□□□□□ -1.92
SYNE1-207ENST00000367255 ESM1Q9NQ30 184 aa3.04□□□□□ -1.92
SYNE1-207ENST00000367255 SMIM26A0A096LP01 95 aa3.04□□□□□ -1.92
SYNE1-207ENST00000367255 ERCC8Q13216 396 aa3.04□□□□□ -1.92
SYNE1-207ENST00000367255 TMEM155Q4W5P6 130 aa3.04□□□□□ -1.92
SYNE1-207ENST00000367255 LEAP2Q969E1 77 aa3.04□□□□□ -1.92
SYNE1-207ENST00000367255 LINC01600Q96MT4 127 aa3.04□□□□□ -1.92
SYNE1-207ENST00000367255 CR1LQ2VPA4 569 aa3.04□□□□□ -1.92
SYNE1-207ENST00000367255 C3orf22Q8N5N4 141 aa3.04□□□□□ -1.92
SYNE1-207ENST00000367255 FGF22Q9HCT0 170 aa3.04□□□□□ -1.92
SYNE1-207ENST00000367255 IGHV4OR15-8A0A075B7B6 117 aa3.04□□□□□ -1.92
SYNE1-207ENST00000367255 A0A087WW49 117 aa3.04□□□□□ -1.92
SYNE1-207ENST00000367255 GP9P14770 177 aa3.04□□□□□ -1.92
SYNE1-207ENST00000367255 IL9P15248 144 aa3.04□□□□□ -1.92
SYNE1-207ENST00000367255 CSRP1P21291 193 aaKnown RBP3.04□□□□□ -1.92
SYNE1-207ENST00000367255 SIPA1L1O43166 1804 aa3.04□□□□□ -1.92
SYNE1-207ENST00000367255 ADAMTSL3P82987 1691 aa3.04□□□□□ -1.92
SYNE1-207ENST00000367255 PRR20EP86478 221 aa3.03□□□□□ -1.92
SYNE1-207ENST00000367255 PRR20CP86479 221 aa3.03□□□□□ -1.92
SYNE1-207ENST00000367255 PRR20DP86480 221 aa3.03□□□□□ -1.92
SYNE1-207ENST00000367255 PRR20BP86481 221 aa3.03□□□□□ -1.92
SYNE1-207ENST00000367255 PRR20AP86496 221 aa3.03□□□□□ -1.92
SYNE1-207ENST00000367255 KRTAP27-1Q3LI81 207 aa3.03□□□□□ -1.92
SYNE1-207ENST00000367255 SPG11Q96JI7 2443 aa3.03□□□□□ -1.92
SYNE1-207ENST00000367255 ARAP2Q8WZ64 1704 aa3.03□□□□□ -1.92
SYNE1-207ENST00000367255 ZNF407Q9C0G0 2248 aa3.03□□□□□ -1.92
SYNE1-207ENST00000367255 EGR2P11161 476 aaPredicted RBP3.03□□□□□ -1.92
SYNE1-207ENST00000367255 Q6ZWC4 215 aa3.03□□□□□ -1.92
SYNE1-207ENST00000367255 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP3.03□□□□□ -1.928e-9■■■□□ 18.3
SYNE1-207ENST00000367255 U3KQK5 164 aa3.03□□□□□ -1.92
SYNE1-207ENST00000367255 V9GYV3 84 aa3.03□□□□□ -1.92
SYNE1-207ENST00000367255 KIR2DL5BQ8NHK3 375 aa3.03□□□□□ -1.92
SYNE1-207ENST00000367255 LYG1Q8N1E2 194 aa3.03□□□□□ -1.92
SYNE1-207ENST00000367255 ZNF32P17041 273 aa3.03□□□□□ -1.92
SYNE1-207ENST00000367255 CCL28Q9NRJ3 127 aa3.03□□□□□ -1.92
SYNE1-207ENST00000367255 STPG1Q5TH74 334 aa3.03□□□□□ -1.92
SYNE1-207ENST00000367255 DOCK5Q9H7D0 1870 aa3.03□□□□□ -1.92
SYNE1-207ENST00000367255 C11orf86A6NJI1 115 aa3.03□□□□□ -1.92
SYNE1-207ENST00000367255 CELA3AP09093 270 aa3.03□□□□□ -1.92
SYNE1-207ENST00000367255 CCL5P13501 91 aa3.03□□□□□ -1.92
SYNE1-207ENST00000367255 SCRT1Q9BWW7 348 aa3.03□□□□□ -1.92
SYNE1-207ENST00000367255 PRB2P02812 416 aaPredicted RBP3.03□□□□□ -1.92
SYNE1-207ENST00000367255 LINC01555Q8NAE3 123 aa3.03□□□□□ -1.92
SYNE1-207ENST00000367255 WNK1Q9H4A3 2382 aa3.03□□□□□ -1.92
SYNE1-207ENST00000367255 TRBV19A0A075B6N1 114 aa3.03□□□□□ -1.92
SYNE1-207ENST00000367255 DSCR8Q96T75 97 aa3.03□□□□□ -1.92
SYNE1-207ENST00000367255 CCL13Q99616 98 aa3.03□□□□□ -1.92
SYNE1-207ENST00000367255 TRAV25A0A0B4J276 109 aa3.03□□□□□ -1.92
SYNE1-207ENST00000367255 SAP30O75446 220 aa3.03□□□□□ -1.92
SYNE1-207ENST00000367255 IGHV3-23P01764 117 aa3.03□□□□□ -1.92
SYNE1-207ENST00000367255 ACACAQ13085 2346 aa3.03□□□□□ -1.92
SYNE1-207ENST00000367255 CD3EP07766 207 aa3.03□□□□□ -1.92
SYNE1-207ENST00000367255 DEFB103AP81534 67 aa3.03□□□□□ -1.92
SYNE1-207ENST00000367255 Q86TA4 180 aa3.03□□□□□ -1.92
SYNE1-207ENST00000367255 TRAV12-2A0A075B6T6 113 aa3.03□□□□□ -1.92
SYNE1-207ENST00000367255 SPRY3O43610 288 aa3.03□□□□□ -1.92
SYNE1-207ENST00000367255 J3QQQ9 107 aa3.03□□□□□ -1.92
SYNE1-207ENST00000367255 LINC01565O15544 149 aa3.03□□□□□ -1.92
SYNE1-207ENST00000367255 CRLF1O75462 422 aa3.03□□□□□ -1.92
SYNE1-207ENST00000367255 PSMB8P28062 276 aa3.03□□□□□ -1.92
SYNE1-207ENST00000367255 CNEP1R1Q8N9A8 125 aa3.03□□□□□ -1.92
SYNE1-207ENST00000367255 LIME1Q9H400 295 aa3.03□□□□□ -1.92
SYNE1-207ENST00000367255 NUP205Q92621 2012 aa3.03□□□□□ -1.92
SYNE1-207ENST00000367255 SVILO95425 2214 aa3.03□□□□□ -1.92
SYNE1-207ENST00000367255 F5H697 171 aa3.03□□□□□ -1.92
SYNE1-207ENST00000367255 J3QLI3 93 aa3.03□□□□□ -1.92
SYNE1-207ENST00000367255 MRPL51Q4U2R6 128 aaKnown RBP3.03□□□□□ -1.92
SYNE1-207ENST00000367255 IGFL4Q6B9Z1 124 aa3.03□□□□□ -1.92
SYNE1-207ENST00000367255 RBMY1FQ15415 496 aaKnown RBP3.03□□□□□ -1.93
SYNE1-207ENST00000367255 IGKV3-20P01619 116 aa3.03□□□□□ -1.93
SYNE1-207ENST00000367255 C1orf195Q5TG92 126 aa3.03□□□□□ -1.93
SYNE1-207ENST00000367255 TRBV7-6A0A0J9YX20 115 aa3.03□□□□□ -1.93
SYNE1-207ENST00000367255 CSDC2Q9Y534 153 aaKnown RBP3.03□□□□□ -1.93
SYNE1-207ENST00000367255 CRYGAP11844 174 aa3.02□□□□□ -1.93
SYNE1-207ENST00000367255 CHCHD2Q9Y6H1 151 aaPredicted RBP3.02□□□□□ -1.93
SYNE1-207ENST00000367255 ANKRD31Q8N7Z5 1873 aa3.02□□□□□ -1.93
SYNE1-207ENST00000367255 DEPPQ9NTK1 212 aa3.02□□□□□ -1.93
SYNE1-207ENST00000367255 CT62P0C5K7 136 aa3.02□□□□□ -1.93
SYNE1-207ENST00000367255 C20orf204Q6ZNR8 217 aa3.02□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms