RNA–Protein interactions for RNA: ENST00000366767.7

CDC42BPA-204, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best) BASIC

Gene CDC42BPA, Length 9,320 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-204ENST00000366767 IGHV2-70DA0A0C4DH43 119 aa4.36□□□□□ -1.71
CDC42BPA-204ENST00000366767 IGKV1D-33P01593 117 aa4.36□□□□□ -1.71
CDC42BPA-204ENST00000366767 IGKV1-33P01594 117 aa4.36□□□□□ -1.71
CDC42BPA-204ENST00000366767 IFI27P40305 119 aaPredicted RBP4.36□□□□□ -1.71
CDC42BPA-204ENST00000366767 NUP35Q8NFH5 326 aa4.36□□□□□ -1.71
CDC42BPA-204ENST00000366767 IGHV3-64A0A075B6Q5 118 aa4.36□□□□□ -1.71
CDC42BPA-204ENST00000366767 IGHV3-72A0A0B4J1Y9 119 aa4.36□□□□□ -1.71
CDC42BPA-204ENST00000366767 TRAV3A0A0B4J244 114 aa4.35□□□□□ -1.71
CDC42BPA-204ENST00000366767 A0A1B0GUS0 222 aa4.35□□□□□ -1.71
CDC42BPA-204ENST00000366767 IGHV3-48P01763 117 aa4.35□□□□□ -1.71
CDC42BPA-204ENST00000366767 CCL3L1P16619 93 aa4.35□□□□□ -1.71
CDC42BPA-204ENST00000366767 ZNF474Q6S9Z5 364 aaPredicted RBP4.35□□□□□ -1.71
CDC42BPA-204ENST00000366767 CEACAM4O75871 244 aa4.35□□□□□ -1.71
CDC42BPA-204ENST00000366767 IGHV1-8P0DP01 117 aa4.35□□□□□ -1.71
CDC42BPA-204ENST00000366767 FXYD7P58549 80 aa4.35□□□□□ -1.71
CDC42BPA-204ENST00000366767 PRR31Q5SQ13 230 aa4.35□□□□□ -1.71
CDC42BPA-204ENST00000366767 FAM231DQ6ZW35 169 aa4.35□□□□□ -1.71
CDC42BPA-204ENST00000366767 IGKV3D-20A0A0C4DH25 116 aa4.35□□□□□ -1.71
CDC42BPA-204ENST00000366767 COX8AP10176 69 aa4.35□□□□□ -1.71
CDC42BPA-204ENST00000366767 GATA2P23769 480 aaPredicted RBP4.35□□□□□ -1.71
CDC42BPA-204ENST00000366767 PRR20EP86478 221 aa4.35□□□□□ -1.71
CDC42BPA-204ENST00000366767 PRR20CP86479 221 aa4.35□□□□□ -1.71
CDC42BPA-204ENST00000366767 PRR20DP86480 221 aa4.35□□□□□ -1.71
CDC42BPA-204ENST00000366767 PRR20BP86481 221 aa4.35□□□□□ -1.71
CDC42BPA-204ENST00000366767 PRR20AP86496 221 aa4.35□□□□□ -1.71
CDC42BPA-204ENST00000366767 TCF15Q12870 199 aa4.35□□□□□ -1.71
CDC42BPA-204ENST00000366767 PIP4P1Q86T03 277 aa4.35□□□□□ -1.71
CDC42BPA-204ENST00000366767 HAX1O00165 279 aa4.35□□□□□ -1.71
CDC42BPA-204ENST00000366767 UNQ6494/PRO21346Q6UXR6 183 aa4.35□□□□□ -1.71
CDC42BPA-204ENST00000366767 GFRA4Q9GZZ7 299 aa4.35□□□□□ -1.71
CDC42BPA-204ENST00000366767 TRAV26-1A0A087WT03 109 aa4.35□□□□□ -1.71
CDC42BPA-204ENST00000366767 TFF1P04155 84 aa4.35□□□□□ -1.71
CDC42BPA-204ENST00000366767 UTF1Q5T230 341 aa4.35□□□□□ -1.71
CDC42BPA-204ENST00000366767 FBXL15Q9H469 300 aa4.35□□□□□ -1.71
CDC42BPA-204ENST00000366767 CEND1Q8N111 149 aa4.35□□□□□ -1.71
CDC42BPA-204ENST00000366767 PLEKHB2Q96CS7 222 aa4.35□□□□□ -1.71
CDC42BPA-204ENST00000366767 PRO3102Q9H379 93 aa4.35□□□□□ -1.71
CDC42BPA-204ENST00000366767 NDUFA4L2Q9NRX3 87 aa4.35□□□□□ -1.71
CDC42BPA-204ENST00000366767 SAP30O75446 220 aa4.35□□□□□ -1.71
CDC42BPA-204ENST00000366767 FOXH1O75593 365 aa4.35□□□□□ -1.71
CDC42BPA-204ENST00000366767 IGLL1P15814 213 aa4.35□□□□□ -1.71
CDC42BPA-204ENST00000366767 PDLIM4P50479 330 aa4.35□□□□□ -1.71
CDC42BPA-204ENST00000366767 GATD1Q8NB37 220 aa4.35□□□□□ -1.71
CDC42BPA-204ENST00000366767 EEF1AKMT3Q96AZ1 226 aa4.35□□□□□ -1.71
CDC42BPA-204ENST00000366767 DPH3P1Q9H4G8 78 aa4.35□□□□□ -1.71
CDC42BPA-204ENST00000366767 KIR2DL5BA0A0G2JN68 375 aa4.34□□□□□ -1.71
CDC42BPA-204ENST00000366767 KIR2DL5BA0A0G2JPC4 375 aa4.34□□□□□ -1.71
CDC42BPA-204ENST00000366767 NBR2O15453 112 aa4.34□□□□□ -1.71
CDC42BPA-204ENST00000366767 RRN3P1Q2M238 152 aa4.34□□□□□ -1.71
CDC42BPA-204ENST00000366767 KIR2DL5AQ8N109 375 aa4.34□□□□□ -1.71
CDC42BPA-204ENST00000366767 ARHGAP32A7KAX9 2087 aa4.34□□□□□ -1.71
CDC42BPA-204ENST00000366767 LHBP01229 141 aa4.34□□□□□ -1.71
CDC42BPA-204ENST00000366767 IGLV2-14P01704 120 aa4.34□□□□□ -1.71
CDC42BPA-204ENST00000366767 SPATA31B1PQ5VZV4 182 aa4.34□□□□□ -1.71
CDC42BPA-204ENST00000366767 INS-IGF2F8WCM5 200 aa4.34□□□□□ -1.71
CDC42BPA-204ENST00000366767 C5orf47Q569G3 176 aa4.34□□□□□ -1.71
CDC42BPA-204ENST00000366767 C15orf53Q8NAA6 179 aa4.34□□□□□ -1.71
CDC42BPA-204ENST00000366767 DYNLRB2Q8TF09 96 aa4.34□□□□□ -1.71
CDC42BPA-204ENST00000366767 TOMM7Q9P0U1 55 aa4.34□□□□□ -1.71
CDC42BPA-204ENST00000366767 NCOR1O75376 2440 aa4.34□□□□□ -1.71
CDC42BPA-204ENST00000366767 LINC01549A6NIU2 74 aa4.34□□□□□ -1.71
CDC42BPA-204ENST00000366767 Q6ZVH6 145 aa4.34□□□□□ -1.71
CDC42BPA-204ENST00000366767 ZCCHC24Q8N2G6 241 aaKnown RBP4.34□□□□□ -1.71
CDC42BPA-204ENST00000366767 ZNF492Q9P255 531 aa4.34□□□□□ -1.71
CDC42BPA-204ENST00000366767 KAAG1Q9UBP8 84 aa4.34□□□□□ -1.71
CDC42BPA-204ENST00000366767 PYYP10082 97 aa4.34□□□□□ -1.71
CDC42BPA-204ENST00000366767 THAP8Q8NA92 274 aa4.34□□□□□ -1.71
CDC42BPA-204ENST00000366767 PSG8Q9UQ74 426 aa4.34□□□□□ -1.71
CDC42BPA-204ENST00000366767 TET2Q6N021 2002 aaPredicted RBP4.34□□□□□ -1.72
CDC42BPA-204ENST00000366767 FABP5P3A8MUU1 101 aa4.34□□□□□ -1.72
CDC42BPA-204ENST00000366767 M0R1W7 72 aa4.34□□□□□ -1.72
CDC42BPA-204ENST00000366767 HERV-K104P63124 156 aa4.34□□□□□ -1.72
CDC42BPA-204ENST00000366767 ANXA2RQ3ZCQ2 193 aa4.34□□□□□ -1.72
CDC42BPA-204ENST00000366767 MINOS1Q5TGZ0 78 aa4.34□□□□□ -1.72
CDC42BPA-204ENST00000366767 MINOS1-NBL1R4GNA1 71 aa4.34□□□□□ -1.72
CDC42BPA-204ENST00000366767 TRAV13-1A0A0B4J241 112 aa4.34□□□□□ -1.72
CDC42BPA-204ENST00000366767 H3BMG7 143 aa4.34□□□□□ -1.72
CDC42BPA-204ENST00000366767 DDB2Q92466 427 aa4.34□□□□□ -1.72
CDC42BPA-204ENST00000366767 DPH3Q96FX2 82 aa4.34□□□□□ -1.72
CDC42BPA-204ENST00000366767 CD28P10747 220 aa4.33□□□□□ -1.72
CDC42BPA-204ENST00000366767 RBMY1FQ15415 496 aaKnown RBP4.33□□□□□ -1.72
CDC42BPA-204ENST00000366767 NCR2O95944 276 aa4.33□□□□□ -1.72
CDC42BPA-204ENST00000366767 PAX1P15863 534 aa4.33□□□□□ -1.72
CDC42BPA-204ENST00000366767 PRSS57Q6UWY2 283 aa4.33□□□□□ -1.72
CDC42BPA-204ENST00000366767 IGHV1-3A0A0C4DH29 117 aa4.33□□□□□ -1.72
CDC42BPA-204ENST00000366767 IGHV1-24A0A0C4DH33 117 aa4.33□□□□□ -1.72
CDC42BPA-204ENST00000366767 A0A0G2JNJ9 132 aa4.33□□□□□ -1.72
CDC42BPA-204ENST00000366767 F2Z2F3 143 aa4.33□□□□□ -1.72
CDC42BPA-204ENST00000366767 ZC2HC1BQ5TFG8 222 aa4.33□□□□□ -1.72
CDC42BPA-204ENST00000366767 ANKRD29Q8N6D5 301 aa4.33□□□□□ -1.72
CDC42BPA-204ENST00000366767 DNAJC30Q96LL9 226 aa4.33□□□□□ -1.72
CDC42BPA-204ENST00000366767 Q9UFV3 132 aa4.33□□□□□ -1.72
CDC42BPA-204ENST00000366767 LRP4O75096 1905 aa4.33□□□□□ -1.72
CDC42BPA-204ENST00000366767 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP4.33□□□□□ -1.72
CDC42BPA-204ENST00000366767 G3V4G9 280 aa4.33□□□□□ -1.72
CDC42BPA-204ENST00000366767 RNASE4P34096 147 aaKnown RBP4.33□□□□□ -1.72
CDC42BPA-204ENST00000366767 ZNF138P52744 262 aa4.33□□□□□ -1.72
CDC42BPA-204ENST00000366767 SLC50A1Q9BRV3 221 aa4.33□□□□□ -1.72
CDC42BPA-204ENST00000366767 SIVA1O15304 175 aa4.33□□□□□ -1.72
CDC42BPA-204ENST00000366767 CRPP02741 224 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms