RNA–Protein interactions for RNA: ENST00000363858.1

RNU6-271P-201, Transcript of RNA, U6 small nuclear 271, pseudogene, humanhuman

BASIC

Gene RNU6-271P, Length 105 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-271P-201ENST00000363858 ATOH7Q8N100 152 aa0.83□□□□□ -2.28
RNU6-271P-201ENST00000363858 LINC00311Q8N616 119 aa0.83□□□□□ -2.28
RNU6-271P-201ENST00000363858 ZNF418Q8TF45 676 aaPredicted RBP0.83□□□□□ -2.28
RNU6-271P-201ENST00000363858 SFT2D1Q8WV19 159 aa0.83□□□□□ -2.28
RNU6-271P-201ENST00000363858 CLEC2BQ92478 149 aa0.83□□□□□ -2.28
RNU6-271P-201ENST00000363858 HYLS1Q96M11 299 aa0.83□□□□□ -2.28
RNU6-271P-201ENST00000363858 TP53RKQ96S44 253 aa0.83□□□□□ -2.28
RNU6-271P-201ENST00000363858 TXNDC17Q9BRA2 123 aa0.83□□□□□ -2.28
RNU6-271P-201ENST00000363858 TCEAL7Q9BRU2 100 aa0.83□□□□□ -2.28
RNU6-271P-201ENST00000363858 TIMM21Q9BVV7 248 aa0.83□□□□□ -2.28
RNU6-271P-201ENST00000363858 TMEM191AQ9H0A3 160 aa0.83□□□□□ -2.28
RNU6-271P-201ENST00000363858 CCDC167Q9P0B6 97 aa0.83□□□□□ -2.28
RNU6-271P-201ENST00000363858 METTL1Q9UBP6 276 aaKnown RBP0.83□□□□□ -2.28
RNU6-271P-201ENST00000363858 TNFSF18Q9UNG2 199 aa0.83□□□□□ -2.28
RNU6-271P-201ENST00000363858 SOX21Q9Y651 276 aaPredicted RBP0.83□□□□□ -2.28
RNU6-271P-201ENST00000363858 COL1A1P02452 1464 aaPredicted RBP0.83□□□□□ -2.28
RNU6-271P-201ENST00000363858 ZNF518AQ6AHZ1 1483 aa0.83□□□□□ -2.28
RNU6-271P-201ENST00000363858 ZNF106Q9H2Y7 1883 aaKnown RBP0.83□□□□□ -2.28
RNU6-271P-201ENST00000363858 DISP1Q96F81 1524 aa0.83□□□□□ -2.28
RNU6-271P-201ENST00000363858 SEC16AO15027 2179 aa0.83□□□□□ -2.28
RNU6-271P-201ENST00000363858 MYH11P35749 1972 aa0.83□□□□□ -2.28
RNU6-271P-201ENST00000363858 N4BP2Q86UW6 1770 aaPredicted RBP0.83□□□□□ -2.28
RNU6-271P-201ENST00000363858 ROCK2O75116 1388 aaKnown RBP0.83□□□□□ -2.28
RNU6-271P-201ENST00000363858 TMEM2Q9UHN6 1383 aa0.83□□□□□ -2.28
RNU6-271P-201ENST00000363858 XIRP1Q702N8 1843 aaKnown RBP0.82□□□□□ -2.28
RNU6-271P-201ENST00000363858 MYO16Q9Y6X6 1858 aa0.82□□□□□ -2.28
RNU6-271P-201ENST00000363858 RIMS1Q86UR5 1692 aaKnown RBP0.82□□□□□ -2.28
RNU6-271P-201ENST00000363858 BCL9LQ86UU0 1499 aa0.82□□□□□ -2.28
RNU6-271P-201ENST00000363858 PRR14LQ5THK1 2151 aa0.82□□□□□ -2.28
RNU6-271P-201ENST00000363858 IGKV2D-26A0A0A0MRZ7 120 aa0.82□□□□□ -2.28
RNU6-271P-201ENST00000363858 TRAV10A0A0B4J240 114 aa0.82□□□□□ -2.28
RNU6-271P-201ENST00000363858 TRAV12-1A0A0B4J245 112 aa0.82□□□□□ -2.28
RNU6-271P-201ENST00000363858 TCRBV4S1A1TA0A5B7 111 aa0.82□□□□□ -2.28
RNU6-271P-201ENST00000363858 IFITM5A6NNB3 132 aa0.82□□□□□ -2.28
RNU6-271P-201ENST00000363858 BBIP1A8MTZ0 92 aa0.82□□□□□ -2.28
RNU6-271P-201ENST00000363858 MIF4GDA9UHW6 222 aaKnown RBP0.82□□□□□ -2.28
RNU6-271P-201ENST00000363858 NPFFO15130 113 aa0.82□□□□□ -2.28
RNU6-271P-201ENST00000363858 DLEU1O43261 78 aa0.82□□□□□ -2.28
RNU6-271P-201ENST00000363858 TCRAP04437 139 aa0.82□□□□□ -2.28
RNU6-271P-201ENST00000363858 APODP05090 189 aa0.82□□□□□ -2.28
RNU6-271P-201ENST00000363858 IGKV4-1P06312 121 aa0.82□□□□□ -2.28
RNU6-271P-201ENST00000363858 CXCL8P10145 99 aa0.82□□□□□ -2.28
RNU6-271P-201ENST00000363858 HLA-DRB4P13762 266 aa0.82□□□□□ -2.28
RNU6-271P-201ENST00000363858 CKS2P33552 79 aa0.82□□□□□ -2.28
RNU6-271P-201ENST00000363858 FOXA3P55318 350 aaPredicted RBP0.82□□□□□ -2.28
RNU6-271P-201ENST00000363858 SNRPD3P62318 126 aaKnown RBP0.82□□□□□ -2.28
RNU6-271P-201ENST00000363858 MRPS10P82664 201 aaKnown RBP0.82□□□□□ -2.28
RNU6-271P-201ENST00000363858 PLGLB1Q02325 96 aa0.82□□□□□ -2.28
RNU6-271P-201ENST00000363858 ASB16-AS1Q495Z4 193 aa0.82□□□□□ -2.28
RNU6-271P-201ENST00000363858 HCP5Q6MZN7 132 aa0.82□□□□□ -2.28
RNU6-271P-201ENST00000363858 SCIMPQ6UWF3 145 aa0.82□□□□□ -2.28
RNU6-271P-201ENST00000363858 IZUMO2Q6UXV1 221 aa0.82□□□□□ -2.28
RNU6-271P-201ENST00000363858 OR5AS1Q8N127 324 aa0.82□□□□□ -2.28
RNU6-271P-201ENST00000363858 C3orf56Q8N813 242 aa0.82□□□□□ -2.28
RNU6-271P-201ENST00000363858 OR4C6Q8NH72 309 aa0.82□□□□□ -2.28
RNU6-271P-201ENST00000363858 CCL4L1Q8NHW4 92 aa0.82□□□□□ -2.28
RNU6-271P-201ENST00000363858 RAB37Q96AX2 223 aa0.82□□□□□ -2.28
RNU6-271P-201ENST00000363858 C2orf88Q9BSF0 95 aa0.82□□□□□ -2.28
RNU6-271P-201ENST00000363858 PSMG3Q9BT73 122 aaPredicted RBP0.82□□□□□ -2.28
RNU6-271P-201ENST00000363858 PDCD10Q9BUL8 212 aa0.82□□□□□ -2.28
RNU6-271P-201ENST00000363858 LINC00470Q9BZP3 86 aa0.82□□□□□ -2.28
RNU6-271P-201ENST00000363858 CST11Q9H112 138 aa0.82□□□□□ -2.28
RNU6-271P-201ENST00000363858 TAF9BQ9HBM6 251 aa0.82□□□□□ -2.28
RNU6-271P-201ENST00000363858 GNG8Q9UK08 70 aa0.82□□□□□ -2.28
RNU6-271P-201ENST00000363858 LHFPL6Q9Y693 200 aa0.82□□□□□ -2.28
RNU6-271P-201ENST00000363858 HLA-DRB4X5D2U9 266 aa0.82□□□□□ -2.28
RNU6-271P-201ENST00000363858 DOCK4Q8N1I0 1966 aa0.82□□□□□ -2.28
RNU6-271P-201ENST00000363858 PTPRSQ13332 1948 aa0.81□□□□□ -2.28
RNU6-271P-201ENST00000363858 PTPRGP23470 1445 aa0.81□□□□□ -2.28
RNU6-271P-201ENST00000363858 ARHGAP31Q2M1Z3 1444 aa0.81□□□□□ -2.28
RNU6-271P-201ENST00000363858 NALCNQ8IZF0 1738 aa0.81□□□□□ -2.28
RNU6-271P-201ENST00000363858 PXDNLA1KZ92 1463 aa0.81□□□□□ -2.28
RNU6-271P-201ENST00000363858 STRCQ7RTU9 1775 aa0.81□□□□□ -2.28
RNU6-271P-201ENST00000363858 A0A0G2JQZ4 141 aa0.81□□□□□ -2.28
RNU6-271P-201ENST00000363858 C3orf85A0A1B0GTC6 90 aa0.81□□□□□ -2.28
RNU6-271P-201ENST00000363858 A0A1B0GV90 55 aa0.81□□□□□ -2.28
RNU6-271P-201ENST00000363858 SDHAF1A6NFY7 115 aa0.81□□□□□ -2.28
RNU6-271P-201ENST00000363858 ZNF705FA8MVS1 300 aaPredicted RBP0.81□□□□□ -2.28
RNU6-271P-201ENST00000363858 LINC00587B1AMM8 73 aa0.81□□□□□ -2.28
RNU6-271P-201ENST00000363858 E7EUB6 86 aa0.81□□□□□ -2.28
RNU6-271P-201ENST00000363858 ZNF670-ZNF695F2Z2N8 137 aa0.81□□□□□ -2.28
RNU6-271P-201ENST00000363858 J3QRE1 110 aa0.81□□□□□ -2.28
RNU6-271P-201ENST00000363858 CDC42EP2O14613 210 aa0.81□□□□□ -2.28
RNU6-271P-201ENST00000363858 GNG7O60262 68 aa0.81□□□□□ -2.28
RNU6-271P-201ENST00000363858 EDF1O60869 148 aaKnown RBP0.81□□□□□ -2.28
RNU6-271P-201ENST00000363858 HYPMO75409 117 aa0.81□□□□□ -2.28
RNU6-271P-201ENST00000363858 IFNGP01579 166 aa0.81□□□□□ -2.28
RNU6-271P-201ENST00000363858 SLC25A5P05141 298 aaKnown RBP0.81□□□□□ -2.28
RNU6-271P-201ENST00000363858 S100PP25815 95 aa0.81□□□□□ -2.28
RNU6-271P-201ENST00000363858 ZNF93P35789 620 aaPredicted RBP0.81□□□□□ -2.28
RNU6-271P-201ENST00000363858 AKR1D1P51857 326 aa0.81□□□□□ -2.28
RNU6-271P-201ENST00000363858 ROMO1P60602 79 aa0.81□□□□□ -2.28
RNU6-271P-201ENST00000363858 BLCAPP62952 87 aa0.81□□□□□ -2.28
RNU6-271P-201ENST00000363858 PDE6HQ13956 83 aa0.81□□□□□ -2.28
RNU6-271P-201ENST00000363858 DIAPH2-AS1Q14236 149 aa0.81□□□□□ -2.28
RNU6-271P-201ENST00000363858 CCSMST1Q4G0I0 132 aa0.81□□□□□ -2.28
RNU6-271P-201ENST00000363858 CLLU1Q5K131 121 aa0.81□□□□□ -2.28
RNU6-271P-201ENST00000363858 FAM74A1Q5RGS3 127 aa0.81□□□□□ -2.28
RNU6-271P-201ENST00000363858 TMEM91Q6ZNR0 172 aa0.81□□□□□ -2.28
RNU6-271P-201ENST00000363858 TEN1Q86WV5 123 aa0.81□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms