RNA–Protein interactions for RNA: ENST00000362700.1

RNU6-228P-201, Transcript of RNA, U6 small nuclear 228, pseudogene, humanhuman

BASIC

Gene RNU6-228P, Length 106 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-228P-201ENST00000362700 LCN6P62502 163 aa-2.34□□□□□ -2.78
RNU6-228P-201ENST00000362700 MLLT11Q13015 90 aaPredicted RBP-2.34□□□□□ -2.78
RNU6-228P-201ENST00000362700 COX17Q14061 63 aa-2.34□□□□□ -2.78
RNU6-228P-201ENST00000362700 LINC01556Q5JQF7 62 aa-2.34□□□□□ -2.78
RNU6-228P-201ENST00000362700 TMEM170BQ5T4T1 132 aa-2.34□□□□□ -2.78
RNU6-228P-201ENST00000362700 MFSD4BQ5TF39 518 aa-2.34□□□□□ -2.78
RNU6-228P-201ENST00000362700 PMF1Q6P1K2 205 aa-2.34□□□□□ -2.78
RNU6-228P-201ENST00000362700 SLC25A26Q70HW3 274 aa-2.34□□□□□ -2.78
RNU6-228P-201ENST00000362700 CENPUQ71F23 418 aa-2.34□□□□□ -2.78
RNU6-228P-201ENST00000362700 CCDC186Q7Z3E2 898 aa-2.34□□□□□ -2.78
RNU6-228P-201ENST00000362700 DPPA2Q7Z7J5 298 aa-2.34□□□□□ -2.78
RNU6-228P-201ENST00000362700 C20orf196Q8IYI0 205 aa-2.34□□□□□ -2.78
RNU6-228P-201ENST00000362700 OFCC1Q8IZS5 231 aa-2.34□□□□□ -2.78
RNU6-228P-201ENST00000362700 CEP112Q8N8E3 955 aa-2.34□□□□□ -2.78
RNU6-228P-201ENST00000362700 OR52L1Q8NGH7 329 aa-2.34□□□□□ -2.78
RNU6-228P-201ENST00000362700 STOML3Q8TAV4 291 aa-2.34□□□□□ -2.78
RNU6-228P-201ENST00000362700 MGARPQ8TDB4 240 aa-2.34□□□□□ -2.78
RNU6-228P-201ENST00000362700 FAM172AQ8WUF8 416 aa-2.34□□□□□ -2.78
RNU6-228P-201ENST00000362700 ORAOV1Q8WV07 137 aa-2.34□□□□□ -2.78
RNU6-228P-201ENST00000362700 C10orf82Q8WW14 230 aa-2.34□□□□□ -2.78
RNU6-228P-201ENST00000362700 CCL17Q92583 94 aa-2.34□□□□□ -2.78
RNU6-228P-201ENST00000362700 FGF11Q92914 225 aa-2.34□□□□□ -2.78
RNU6-228P-201ENST00000362700 TMEM54Q969K7 222 aa-2.34□□□□□ -2.78
RNU6-228P-201ENST00000362700 HAUS1Q96CS2 278 aa-2.34□□□□□ -2.78
RNU6-228P-201ENST00000362700 PACRGQ96M98 296 aaPredicted RBP-2.34□□□□□ -2.78
RNU6-228P-201ENST00000362700 WFDC6Q9BQY6 131 aa-2.34□□□□□ -2.78
RNU6-228P-201ENST00000362700 TCHPQ9BT92 498 aa-2.34□□□□□ -2.78
RNU6-228P-201ENST00000362700 RHPN1-AS1Q9BWJ2 59 aa-2.34□□□□□ -2.78
RNU6-228P-201ENST00000362700 METTL8Q9H825 291 aaKnown RBP-2.34□□□□□ -2.78
RNU6-228P-201ENST00000362700 COPZ2Q9P299 210 aa-2.34□□□□□ -2.78
RNU6-228P-201ENST00000362700 SLC35A3Q9Y2D2 325 aa-2.34□□□□□ -2.78
RNU6-228P-201ENST00000362700 ORC6Q9Y5N6 252 aa-2.34□□□□□ -2.78
RNU6-228P-201ENST00000362700 OVOS2A0A0G2JMS6 1433 aa-2.34□□□□□ -2.78
RNU6-228P-201ENST00000362700 OVOS2A0A0J9YW53 1432 aa-2.34□□□□□ -2.78
RNU6-228P-201ENST00000362700 OVOS2Q6IE36 1432 aa-2.34□□□□□ -2.78
RNU6-228P-201ENST00000362700 SCN7AQ01118 1682 aa-2.34□□□□□ -2.78
RNU6-228P-201ENST00000362700 MYH2Q9UKX2 1941 aa-2.34□□□□□ -2.78
RNU6-228P-201ENST00000362700 EIF4G3O43432 1585 aaKnown RBP-2.35□□□□□ -2.79
RNU6-228P-201ENST00000362700 CCDC171Q6TFL3 1326 aa-2.35□□□□□ -2.79
RNU6-228P-201ENST00000362700 PPLO60437 1756 aa-2.35□□□□□ -2.79
RNU6-228P-201ENST00000362700 A0A1B0GW64 132 aa-2.35□□□□□ -2.79
RNU6-228P-201ENST00000362700 TRDV1A0A1B0GX56 115 aa-2.35□□□□□ -2.79
RNU6-228P-201ENST00000362700 SMCO2A6NFE2 343 aa-2.35□□□□□ -2.79
RNU6-228P-201ENST00000362700 E7EUB6 86 aa-2.35□□□□□ -2.79
RNU6-228P-201ENST00000362700 I3L4J1 428 aa-2.35□□□□□ -2.79
RNU6-228P-201ENST00000362700 NEMFO60524 1076 aa-2.35□□□□□ -2.79
RNU6-228P-201ENST00000362700 BCAS2O75934 225 aaPredicted RBP-2.35□□□□□ -2.79
RNU6-228P-201ENST00000362700 CST4P01036 141 aa-2.35□□□□□ -2.79
RNU6-228P-201ENST00000362700 IFNA4P05014 189 aa-2.35□□□□□ -2.79
RNU6-228P-201ENST00000362700 IFNA16P05015 189 aa-2.35□□□□□ -2.79
RNU6-228P-201ENST00000362700 FABP4P15090 132 aa-2.35□□□□□ -2.79
RNU6-228P-201ENST00000362700 CSNK2A2P19784 350 aaPredicted RBP-2.35□□□□□ -2.79
RNU6-228P-201ENST00000362700 ANXA13P27216 316 aa-2.35□□□□□ -2.79
RNU6-228P-201ENST00000362700 GABRR2P28476 465 aa-2.35□□□□□ -2.79
RNU6-228P-201ENST00000362700 GNA11P29992 359 aa-2.35□□□□□ -2.79
RNU6-228P-201ENST00000362700 RFC4P35249 363 aa-2.35□□□□□ -2.79
RNU6-228P-201ENST00000362700 NDUFA6P56556 154 aa-2.35□□□□□ -2.79
RNU6-228P-201ENST00000362700 FXYD7P58549 80 aa-2.35□□□□□ -2.79
RNU6-228P-201ENST00000362700 TAS2R39P59534 338 aa-2.35□□□□□ -2.79
RNU6-228P-201ENST00000362700 MRPS36P82909 103 aaKnown RBP-2.35□□□□□ -2.79
RNU6-228P-201ENST00000362700 KRR1Q13601 381 aaKnown RBP-2.35□□□□□ -2.79
RNU6-228P-201ENST00000362700 UBE2V2Q15819 145 aa-2.35□□□□□ -2.79
RNU6-228P-201ENST00000362700 GRK1Q15835 563 aa-2.35□□□□□ -2.79
RNU6-228P-201ENST00000362700 SSX1Q16384 188 aa-2.35□□□□□ -2.79
RNU6-228P-201ENST00000362700 TDRG1Q3Y452 100 aa-2.35□□□□□ -2.79
RNU6-228P-201ENST00000362700 PDZK1Q5T2W1 519 aa-2.35□□□□□ -2.79
RNU6-228P-201ENST00000362700 HACD4Q5VWC8 232 aa-2.35□□□□□ -2.79
RNU6-228P-201ENST00000362700 CNIH2Q6PI25 160 aa-2.35□□□□□ -2.79
RNU6-228P-201ENST00000362700 KDELC1Q6UW63 502 aa-2.35□□□□□ -2.79
RNU6-228P-201ENST00000362700 CLEC19AQ6UXS0 136 aa-2.35□□□□□ -2.79
RNU6-228P-201ENST00000362700 KRT222Q8N1A0 295 aa-2.35□□□□□ -2.79
RNU6-228P-201ENST00000362700 OR1L4Q8NGR5 311 aa-2.35□□□□□ -2.79
RNU6-228P-201ENST00000362700 OR52E5Q8NH55 327 aa-2.35□□□□□ -2.79
RNU6-228P-201ENST00000362700 NUBPLQ8TB37 319 aa-2.35□□□□□ -2.79
RNU6-228P-201ENST00000362700 COX7B2Q8TF08 81 aa-2.35□□□□□ -2.79
RNU6-228P-201ENST00000362700 STMN2Q93045 179 aa-2.35□□□□□ -2.79
RNU6-228P-201ENST00000362700 MRPL48Q96GC5 212 aaKnown RBP-2.35□□□□□ -2.79
RNU6-228P-201ENST00000362700 SERPINB12Q96P63 405 aa-2.35□□□□□ -2.79
RNU6-228P-201ENST00000362700 CXorf21Q9HAI6 301 aa-2.35□□□□□ -2.79
RNU6-228P-201ENST00000362700 PARVBQ9HBI1 364 aa-2.35□□□□□ -2.79
RNU6-228P-201ENST00000362700 HOMER3Q9NSC5 361 aa-2.35□□□□□ -2.79
RNU6-228P-201ENST00000362700 POMPQ9Y244 141 aa-2.35□□□□□ -2.79
RNU6-228P-201ENST00000362700 BZW2Q9Y6E2 419 aaKnown RBP-2.35□□□□□ -2.79
RNU6-228P-201ENST00000362700 ROCK2O75116 1388 aaKnown RBP-2.36□□□□□ -2.79
RNU6-228P-201ENST00000362700 NINLQ9Y2I6 1382 aa-2.36□□□□□ -2.79
RNU6-228P-201ENST00000362700 NEXMIFQ5QGS0 1516 aa-2.36□□□□□ -2.79
RNU6-228P-201ENST00000362700 TRBV7-3A0A075B6L6 115 aa-2.36□□□□□ -2.79
RNU6-228P-201ENST00000362700 LOC100130705A0A1B0GUX0 176 aa-2.36□□□□□ -2.79
RNU6-228P-201ENST00000362700 TCRBV21S2A2A0A5A6 115 aa-2.36□□□□□ -2.79
RNU6-228P-201ENST00000362700 C7orf77A4D0Y5 90 aa-2.36□□□□□ -2.79
RNU6-228P-201ENST00000362700 OR6C65A6NJZ3 312 aa-2.36□□□□□ -2.79
RNU6-228P-201ENST00000362700 K7ERQ8 282 aa-2.36□□□□□ -2.79
RNU6-228P-201ENST00000362700 PRPSAP2O60256 369 aa-2.36□□□□□ -2.79
RNU6-228P-201ENST00000362700 FAM107AO95990 144 aa-2.36□□□□□ -2.79
RNU6-228P-201ENST00000362700 IFNA7P01567 189 aa-2.36□□□□□ -2.79
RNU6-228P-201ENST00000362700 SERPINA6P08185 405 aa-2.36□□□□□ -2.79
RNU6-228P-201ENST00000362700 ANXA3P12429 323 aa-2.36□□□□□ -2.79
RNU6-228P-201ENST00000362700 RPL7P18124 248 aaKnown RBP-2.36□□□□□ -2.79
RNU6-228P-201ENST00000362700 SNCAP37840 140 aa-2.36□□□□□ -2.79
RNU6-228P-201ENST00000362700 RGS4P49798 205 aa-2.36□□□□□ -2.79
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms