RNA–Protein interactions for RNA: ENST00000361866.7

COL6A1-201, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL6A1, Length 4,238 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-201ENST00000361866 CYSLTR1Q9Y271 337 aa11.14□□□□□ -0.63
COL6A1-201ENST00000361866 PATE2Q6UY27 113 aa11.13□□□□□ -0.63
COL6A1-201ENST00000361866 TMEM158Q8WZ71 300 aa11.13□□□□□ -0.63
COL6A1-201ENST00000361866 IGLC7A0M8Q6 106 aa11.13□□□□□ -0.63
COL6A1-201ENST00000361866 IGLV1-44P01699 117 aa11.13□□□□□ -0.63
COL6A1-201ENST00000361866 CKS1BP61024 79 aa11.13□□□□□ -0.63
COL6A1-201ENST00000361866 ATP5G2Q06055 141 aa11.13□□□□□ -0.63
COL6A1-201ENST00000361866 TP53TG3Q9ULZ0 132 aa11.13□□□□□ -0.63
COL6A1-201ENST00000361866 KIAA1549Q9HCM3 1950 aa11.13□□□□□ -0.63
COL6A1-201ENST00000361866 BUB1B-PAK6H3BSN5 160 aa11.13□□□□□ -0.63
COL6A1-201ENST00000361866 ERCC8Q13216 396 aa11.13□□□□□ -0.63
COL6A1-201ENST00000361866 TMEM75Q8N9X5 138 aa11.13□□□□□ -0.63
COL6A1-201ENST00000361866 ZNF256Q9Y2P7 627 aaPredicted RBP11.13□□□□□ -0.63
COL6A1-201ENST00000361866 A0A0G2JNJ9 132 aa11.12□□□□□ -0.63
COL6A1-201ENST00000361866 NDPQ00604 133 aa11.12□□□□□ -0.63
COL6A1-201ENST00000361866 C15orf32Q32M92 178 aa11.12□□□□□ -0.63
COL6A1-201ENST00000361866 CD300EQ496F6 205 aaPredicted RBP11.12□□□□□ -0.63
COL6A1-201ENST00000361866 MRPL36Q9P0J6 103 aaKnown RBP11.12□□□□□ -0.63
COL6A1-201ENST00000361866 Q9UFV3 132 aa11.12□□□□□ -0.63
COL6A1-201ENST00000361866 SMAD7O15105 426 aaKnown RBP11.12□□□□□ -0.63
COL6A1-201ENST00000361866 P0C879 139 aa11.12□□□□□ -0.63
COL6A1-201ENST00000361866 ESDP10768 282 aa11.12□□□□□ -0.63
COL6A1-201ENST00000361866 ZNF672Q499Z4 452 aaPredicted RBP11.12□□□□□ -0.63
COL6A1-201ENST00000361866 KIR2DL4Q99706 377 aa11.12□□□□□ -0.63
COL6A1-201ENST00000361866 SRD5A1P18405 259 aa11.12□□□□□ -0.63
COL6A1-201ENST00000361866 PAX2Q02962 417 aa11.12□□□□□ -0.63
COL6A1-201ENST00000361866 ZNF56Q15929 161 aa11.12□□□□□ -0.63
COL6A1-201ENST00000361866 MSMPQ1L6U9 139 aa11.12□□□□□ -0.63
COL6A1-201ENST00000361866 ZNF833PQ6ZTB9 187 aa11.12□□□□□ -0.63
COL6A1-201ENST00000361866 EEF1AKMT3Q96AZ1 226 aa11.12□□□□□ -0.63
COL6A1-201ENST00000361866 NCOR1P1Q9H4R4 102 aa11.12□□□□□ -0.63
COL6A1-201ENST00000361866 MUC22E2RYF6 1773 aaPredicted RBP11.12□□□□□ -0.63
COL6A1-201ENST00000361866 TMEM238C9JI98 176 aa11.11□□□□□ -0.63
COL6A1-201ENST00000361866 PPBPP02775 128 aa11.11□□□□□ -0.63
COL6A1-201ENST00000361866 OR5A1Q8NGJ0 315 aa11.11□□□□□ -0.63
COL6A1-201ENST00000361866 LGALS3P17931 250 aaKnown RBP11.11□□□□□ -0.63
COL6A1-201ENST00000361866 EMP1P54849 157 aa11.11□□□□□ -0.63
COL6A1-201ENST00000361866 RNASE4P34096 147 aaKnown RBP11.11□□□□□ -0.63
COL6A1-201ENST00000361866 RAB9AP51151 201 aa11.11□□□□□ -0.63
COL6A1-201ENST00000361866 POU2AF1Q16633 256 aa11.11□□□□□ -0.63
COL6A1-201ENST00000361866 FAM159AQ6UWV7 190 aa11.11□□□□□ -0.63
COL6A1-201ENST00000361866 FAM167A-AS1Q96KT0 104 aa11.11□□□□□ -0.63
COL6A1-201ENST00000361866 MYO18BQ8IUG5 2567 aa11.11□□□□□ -0.63
COL6A1-201ENST00000361866 SHANK2-AS3Q9BTD1 123 aa11.11□□□□□ -0.63
COL6A1-201ENST00000361866 RNF114Q9Y508 228 aa11.11□□□□□ -0.63
COL6A1-201ENST00000361866 TRBV19A0A075B6N1 114 aa11.1□□□□□ -0.63
COL6A1-201ENST00000361866 TRAV40A0A0B4J280 105 aa11.1□□□□□ -0.63
COL6A1-201ENST00000361866 DDB2Q92466 427 aa11.1□□□□□ -0.63
COL6A1-201ENST00000361866 ZNF503Q96F45 646 aa11.1□□□□□ -0.63
COL6A1-201ENST00000361866 SIGLEC8Q9NYZ4 499 aa11.1□□□□□ -0.63
COL6A1-201ENST00000361866 LOXP28300 417 aaPredicted RBP11.1□□□□□ -0.63
COL6A1-201ENST00000361866 FAM120AOSQ5T036 256 aa11.1□□□□□ -0.63
COL6A1-201ENST00000361866 ZNF492Q9P255 531 aa11.1□□□□□ -0.63
COL6A1-201ENST00000361866 SETD2Q9BYW2 2564 aaPredicted RBP11.1□□□□□ -0.63
COL6A1-201ENST00000361866 RNF182Q8N6D2 247 aa11.1□□□□□ -0.63
COL6A1-201ENST00000361866 RITA1Q96K30 269 aa11.1□□□□□ -0.63
COL6A1-201ENST00000361866 IGLV3-9A0A075B6K5 115 aa11.09□□□□□ -0.63
COL6A1-201ENST00000361866 A0A1W2PNU3 283 aaPredicted RBP11.09□□□□□ -0.63
COL6A1-201ENST00000361866 COX8AP10176 69 aa11.09□□□□□ -0.63
COL6A1-201ENST00000361866 ASIPP42127 132 aa11.09□□□□□ -0.63
COL6A1-201ENST00000361866 KLRB1Q12918 225 aa11.09□□□□□ -0.63
COL6A1-201ENST00000361866 FAM104BQ5XKR9 115 aa11.09□□□□□ -0.63
COL6A1-201ENST00000361866 GFRA4Q9GZZ7 299 aa11.09□□□□□ -0.63
COL6A1-201ENST00000361866 ZNF815PA8K554 130 aa11.09□□□□□ -0.63
COL6A1-201ENST00000361866 WT1P19544 449 aaPredicted RBP11.09□□□□□ -0.63
COL6A1-201ENST00000361866 GATA4P43694 442 aa11.09□□□□□ -0.63
COL6A1-201ENST00000361866 C1orf229Q6ZS94 237 aaPredicted RBP11.09□□□□□ -0.63
COL6A1-201ENST00000361866 IGLC1P0CG04 106 aa11.09□□□□□ -0.63
COL6A1-201ENST00000361866 SRSF1Q07955 248 aaKnown RBP eCLIP11.09□□□□□ -0.63
COL6A1-201ENST00000361866 C5orf64Q2M2E5 130 aa11.09□□□□□ -0.63
COL6A1-201ENST00000361866 MRPL51Q4U2R6 128 aaKnown RBP11.09□□□□□ -0.63
COL6A1-201ENST00000361866 K7EP13 123 aa11.08□□□□□ -0.64
COL6A1-201ENST00000361866 TMEM155Q4W5P6 130 aa11.08□□□□□ -0.64
COL6A1-201ENST00000361866 CT83Q5H943 113 aa11.08□□□□□ -0.64
COL6A1-201ENST00000361866 GTSF1Q8WW33 167 aa11.08□□□□□ -0.64
COL6A1-201ENST00000361866 IGHV3-64A0A075B6Q5 118 aa11.08□□□□□ -0.64
COL6A1-201ENST00000361866 C22orf46C9J442 243 aa11.08□□□□□ -0.64
COL6A1-201ENST00000361866 NPYP01303 97 aa11.08□□□□□ -0.64
COL6A1-201ENST00000361866 TMEM219Q86XT9 240 aa11.08□□□□□ -0.64
COL6A1-201ENST00000361866 PCP2Q8IVA1 136 aa11.08□□□□□ -0.64
COL6A1-201ENST00000361866 TNFRSF14Q92956 283 aa11.08□□□□□ -0.64
COL6A1-201ENST00000361866 IGF2BP2-AS1Q96M15 143 aa11.08□□□□□ -0.64
COL6A1-201ENST00000361866 CHAC1Q9BUX1 264 aa11.08□□□□□ -0.64
COL6A1-201ENST00000361866 DKK2Q9UBU2 259 aa11.08□□□□□ -0.64
COL6A1-201ENST00000361866 TRIOO75962 3097 aa11.08□□□□□ -0.64
COL6A1-201ENST00000361866 E7EQL1 145 aa11.08□□□□□ -0.64
COL6A1-201ENST00000361866 SAP30O75446 220 aa11.08□□□□□ -0.64
COL6A1-201ENST00000361866 ETDBQ3ZM63 59 aa11.08□□□□□ -0.64
COL6A1-201ENST00000361866 GAGE13Q4V321 117 aa11.08□□□□□ -0.64
COL6A1-201ENST00000361866 ZNF747Q9BV97 191 aa11.08□□□□□ -0.64
COL6A1-201ENST00000361866 FAM215AQ9Y5M1 114 aa11.08□□□□□ -0.64
COL6A1-201ENST00000361866 K7ERJ3 54 aa11.07□□□□□ -0.64
COL6A1-201ENST00000361866 TNFRSF6BO95407 300 aa11.07□□□□□ -0.64
COL6A1-201ENST00000361866 TTTY13Q9BZ97 58 aa11.07□□□□□ -0.64
COL6A1-201ENST00000361866 IGHV2-70DA0A0C4DH43 119 aa11.07□□□□□ -0.64
COL6A1-201ENST00000361866 K7EMI3 77 aa11.07□□□□□ -0.64
COL6A1-201ENST00000361866 HLA-DMBP28068 263 aa11.07□□□□□ -0.64
COL6A1-201ENST00000361866 ANKRD39Q53RE8 183 aa11.07□□□□□ -0.64
COL6A1-201ENST00000361866 ANAPC13Q9BS18 74 aa11.07□□□□□ -0.64
COL6A1-201ENST00000361866 C14orf178Q8N769 122 aaPredicted RBP11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms