RNA–Protein interactions for RNA: ENST00000361654.8

CLIP1-203, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 5 BASIC

Gene CLIP1, Length 5,568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-203ENST00000361654 IGKV1-5P01602 117 aa8.81□□□□□ -1
CLIP1-203ENST00000361654 HSD52Q0P140 79 aa8.81□□□□□ -1
CLIP1-203ENST00000361654 PMVKQ15126 192 aa8.81□□□□□ -1
CLIP1-203ENST00000361654 Q6ZS49 121 aa8.81□□□□□ -1
CLIP1-203ENST00000361654 LY96Q9Y6Y9 160 aa8.81□□□□□ -1
CLIP1-203ENST00000361654 USF3Q68DE3 2245 aa8.81□□□□□ -1
CLIP1-203ENST00000361654 IGKV2D-24A0A075B6R9 120 aa8.81□□□□□ -1
CLIP1-203ENST00000361654 I3L3M4 83 aa8.81□□□□□ -1
CLIP1-203ENST00000361654 ZNF479Q96JC4 524 aa8.81□□□□□ -1
CLIP1-203ENST00000361654 RPP25LQ8N5L8 163 aaKnown RBP8.81□□□□□ -1
CLIP1-203ENST00000361654 LINC00311Q8N616 119 aa8.81□□□□□ -1
CLIP1-203ENST00000361654 ZNRF2Q8NHG8 242 aa8.81□□□□□ -1
CLIP1-203ENST00000361654 IGHV3-16A0A0C4DH30 117 aa8.8□□□□□ -1
CLIP1-203ENST00000361654 ANGP03950 147 aaKnown RBP8.8□□□□□ -1
CLIP1-203ENST00000361654 HIST3H2BBQ8N257 126 aa8.8□□□□□ -1
CLIP1-203ENST00000361654 CYTL1Q9NRR1 136 aa8.8□□□□□ -1
CLIP1-203ENST00000361654 DEFB112Q30KQ8 113 aa8.8□□□□□ -1
CLIP1-203ENST00000361654 NEGR1Q7Z3B1 354 aa8.8□□□□□ -1
CLIP1-203ENST00000361654 KLK9Q9UKQ9 250 aa8.8□□□□□ -1
CLIP1-203ENST00000361654 DOCK6Q96HP0 2047 aa8.8□□□□□ -1
CLIP1-203ENST00000361654 ATRXP46100 2492 aa8.8□□□□□ -1
CLIP1-203ENST00000361654 GPR179Q6PRD1 2367 aa8.8□□□□□ -1
CLIP1-203ENST00000361654 ROS1P08922 2347 aa8.8□□□□□ -1
CLIP1-203ENST00000361654 PRB4P10163 310 aaPredicted RBP8.8□□□□□ -1
CLIP1-203ENST00000361654 LOXP28300 417 aaPredicted RBP8.8□□□□□ -1
CLIP1-203ENST00000361654 HIST1H4AP62805 103 aaKnown RBP8.8□□□□□ -1
CLIP1-203ENST00000361654 GAGE6Q13070 117 aa8.8□□□□□ -1
CLIP1-203ENST00000361654 ATP6V0BQ99437 205 aa8.8□□□□□ -1
CLIP1-203ENST00000361654 GBF1Q92538 1859 aa8.8□□□□□ -1
CLIP1-203ENST00000361654 IGKV1-16P04430 117 aa8.8□□□□□ -1
CLIP1-203ENST00000361654 RHOHQ15669 191 aa8.8□□□□□ -1
CLIP1-203ENST00000361654 LHFPL1Q86WI0 220 aa8.8□□□□□ -1
CLIP1-203ENST00000361654 PATJQ8NI35 1801 aa8.8□□□□□ -1
CLIP1-203ENST00000361654 IGHV2-70P01814 119 aa8.8□□□□□ -1
CLIP1-203ENST00000361654 TAL2Q16559 108 aa8.8□□□□□ -1
CLIP1-203ENST00000361654 HIST1H2BLQ99880 126 aa8.8□□□□□ -1
CLIP1-203ENST00000361654 TCF15Q12870 199 aa8.79□□□□□ -1
CLIP1-203ENST00000361654 CACNA1HO95180 2353 aa8.79□□□□□ -1
CLIP1-203ENST00000361654 IGKV1OR2-108A0A075B7D4 117 aa8.79□□□□□ -1
CLIP1-203ENST00000361654 TEX36Q5VZQ5 186 aa8.79□□□□□ -1
CLIP1-203ENST00000361654 SUMO4Q6EEV6 95 aa8.79□□□□□ -1
CLIP1-203ENST00000361654 DEFB104AQ8WTQ1 72 aa8.79□□□□□ -1
CLIP1-203ENST00000361654 LOC285556D6RIA3 1793 aa8.79□□□□□ -1
CLIP1-203ENST00000361654 TRAV1-1A0A0B4J248 108 aa8.79□□□□□ -1
CLIP1-203ENST00000361654 IGHV7-4-1A0A0J9YVY3 117 aa8.79□□□□□ -1
CLIP1-203ENST00000361654 CRLF1O75462 422 aa8.79□□□□□ -1
CLIP1-203ENST00000361654 MMP23AO75900 390 aa8.79□□□□□ -1
CLIP1-203ENST00000361654 CXCL1P09341 107 aa8.79□□□□□ -1
CLIP1-203ENST00000361654 NTF4P34130 210 aa8.79□□□□□ -1
CLIP1-203ENST00000361654 SH2D6Q7Z4S9 175 aa8.79□□□□□ -1
CLIP1-203ENST00000361654 PIFOQ8TCI5 191 aa8.79□□□□□ -1
CLIP1-203ENST00000361654 TMEM141Q96I45 108 aa8.79□□□□□ -1
CLIP1-203ENST00000361654 A0A1B0GV72 72 aa8.79□□□□□ -1
CLIP1-203ENST00000361654 SRSF2Q01130 221 aaKnown RBP8.79□□□□□ -1
CLIP1-203ENST00000361654 Q86TA4 180 aa8.79□□□□□ -1
CLIP1-203ENST00000361654 CHAC1Q9BUX1 264 aa8.79□□□□□ -1
CLIP1-203ENST00000361654 C1orf43Q9BWL3 253 aa8.79□□□□□ -1
CLIP1-203ENST00000361654 PRSS29PA6NIE9 313 aa8.78□□□□□ -1
CLIP1-203ENST00000361654 GP9P14770 177 aa8.78□□□□□ -1
CLIP1-203ENST00000361654 SCN8AQ9UQD0 1980 aa8.78□□□□□ -1
CLIP1-203ENST00000361654 IGHV2-5P01817 119 aa8.78□□□□□ -1
CLIP1-203ENST00000361654 SMIM2Q9BVW6 85 aa8.78□□□□□ -1
CLIP1-203ENST00000361654 OTOFQ9HC10 1997 aa8.78□□□□□ -1
CLIP1-203ENST00000361654 ZNF833PQ6ZTB9 187 aa8.78□□□□□ -1
CLIP1-203ENST00000361654 VSIRQ9H7M9 311 aa8.78□□□□□ -1
CLIP1-203ENST00000361654 PRB1P04280 392 aa8.78□□□□□ -1
CLIP1-203ENST00000361654 SPART-AS1P0CW21 52 aa8.78□□□□□ -1
CLIP1-203ENST00000361654 C8orf86Q6ZUL3 223 aa8.78□□□□□ -1
CLIP1-203ENST00000361654 TMEM75Q8N9X5 138 aa8.78□□□□□ -1
CLIP1-203ENST00000361654 DERL1Q9BUN8 251 aa8.78□□□□□ -1
CLIP1-203ENST00000361654 FAM215AQ9Y5M1 114 aa8.77□□□□□ -1.01
CLIP1-203ENST00000361654 ESDP10768 282 aa8.77□□□□□ -1.01
CLIP1-203ENST00000361654 PFN2P35080 140 aa8.77□□□□□ -1.01
CLIP1-203ENST00000361654 ANXA2RQ3ZCQ2 193 aa8.77□□□□□ -1.01
CLIP1-203ENST00000361654 GAGE2EQ4V326 116 aa8.77□□□□□ -1.01
CLIP1-203ENST00000361654 FOXI2Q6ZQN5 318 aa8.77□□□□□ -1.01
CLIP1-203ENST00000361654 GAGE2DQ9UEU5 116 aa8.77□□□□□ -1.01
CLIP1-203ENST00000361654 IGLV3-9A0A075B6K5 115 aa8.77□□□□□ -1.01
CLIP1-203ENST00000361654 TRAV8-1A0A0A6YYK1 113 aa8.77□□□□□ -1.01
CLIP1-203ENST00000361654 IGHV4-59P01825 116 aa8.77□□□□□ -1.01
CLIP1-203ENST00000361654 GFRA4Q9GZZ7 299 aa8.77□□□□□ -1.01
CLIP1-203ENST00000361654 IGHV1-24A0A0C4DH33 117 aa8.77□□□□□ -1.01
CLIP1-203ENST00000361654 C15orf62A8K5M9 175 aa8.77□□□□□ -1.01
CLIP1-203ENST00000361654 UBE2WQ96B02 151 aa8.77□□□□□ -1.01
CLIP1-203ENST00000361654 WFDC1Q9HC57 220 aa8.77□□□□□ -1.01
CLIP1-203ENST00000361654 TMEM14BQ9NUH8 114 aa8.77□□□□□ -1.01
CLIP1-203ENST00000361654 KAAG1Q9UBP8 84 aa8.77□□□□□ -1.01
CLIP1-203ENST00000361654 PSME4Q14997 1843 aa8.77□□□□□ -1.01
CLIP1-203ENST00000361654 PDCD11Q14690 1871 aaKnown RBP8.76□□□□□ -1.01
CLIP1-203ENST00000361654 CHD5Q8TDI0 1954 aa8.76□□□□□ -1.01
CLIP1-203ENST00000361654 FOXE3Q13461 319 aa8.76□□□□□ -1.01
CLIP1-203ENST00000361654 IGF2-ASQ6U949 168 aa8.76□□□□□ -1.01
CLIP1-203ENST00000361654 C2orf82Q6UX34 121 aa8.76□□□□□ -1.01
CLIP1-203ENST00000361654 DOCK7Q96N67 2140 aa8.76□□□□□ -1.01
CLIP1-203ENST00000361654 ZNF48Q96MX3 618 aaPredicted RBP8.76□□□□□ -1.01
CLIP1-203ENST00000361654 TMEM242Q9NWH2 141 aa8.76□□□□□ -1.01
CLIP1-203ENST00000361654 CREBBPQ92793 2442 aa8.76□□□□□ -1.01
CLIP1-203ENST00000361654 HS3ST6Q96QI5 342 aa8.76□□□□□ -1.01
CLIP1-203ENST00000361654 ANK1P16157 1881 aa8.76□□□□□ -1.01
CLIP1-203ENST00000361654 IGLV1-44P01699 117 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms